RNA–Protein interactions for RNA: ENSMUST00000193839.5

Pcdha1-202, Transcript of Protocadherin alpha 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pcdha1, Length 4,925 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-202ENSMUST00000193839 Timm17aQ9Z0V8 171 aa10.64□□□□□ -0.71
Pcdha1-202ENSMUST00000193839 Arhgef17Q80U35 2057 aa10.64□□□□□ -0.71
Pcdha1-202ENSMUST00000193839 Igkv4-57A0A0A6YYE7 117 aa10.64□□□□□ -0.71
Pcdha1-202ENSMUST00000193839 Ubl5Q9EPV8 73 aa10.64□□□□□ -0.71
Pcdha1-202ENSMUST00000193839 Trav4-3A0A0B4J1K1 110 aa10.63□□□□□ -0.71
Pcdha1-202ENSMUST00000193839 Pet100P0DJE0 76 aa10.63□□□□□ -0.71
Pcdha1-202ENSMUST00000193839 Crip1P63254 77 aa10.63□□□□□ -0.71
Pcdha1-202ENSMUST00000193839 Leap2Q91V13 76 aa10.63□□□□□ -0.71
Pcdha1-202ENSMUST00000193839 Tomm7Q9D173 55 aa10.63□□□□□ -0.71
Pcdha1-202ENSMUST00000193839 Morn5Q9DAI9 170 aa10.63□□□□□ -0.71
Pcdha1-202ENSMUST00000193839 Sprr3O09116 238 aa10.63□□□□□ -0.71
Pcdha1-202ENSMUST00000193839 PpdpfQ9CR37 115 aa10.63□□□□□ -0.71
Pcdha1-202ENSMUST00000193839 Tnfrsf23Q9ER63 176 aa10.63□□□□□ -0.71
Pcdha1-202ENSMUST00000193839 Col27a1Q5QNQ9 1845 aa10.63□□□□□ -0.71
Pcdha1-202ENSMUST00000193839 Hoxd3P09027 433 aa10.62□□□□□ -0.71
Pcdha1-202ENSMUST00000193839 Ss18l2Q9D174 77 aa10.62□□□□□ -0.71
Pcdha1-202ENSMUST00000193839 Chd8Q09XV5 2582 aaKnown RBP10.62□□□□□ -0.71
Pcdha1-202ENSMUST00000193839 Gm3285A0A1W2P7U0 201 aa10.62□□□□□ -0.71
Pcdha1-202ENSMUST00000193839 Vsig4F6TUL9 280 aa10.62□□□□□ -0.71
Pcdha1-202ENSMUST00000193839 Rpl32P62911 135 aaKnown RBP10.62□□□□□ -0.71
Pcdha1-202ENSMUST00000193839 Znf575Q3TXZ1 239 aa10.62□□□□□ -0.71
Pcdha1-202ENSMUST00000193839 Lgals4Q8K419 326 aa10.61□□□□□ -0.71
Pcdha1-202ENSMUST00000193839 Rnf183Q8QZS5 190 aa10.61□□□□□ -0.71
Pcdha1-202ENSMUST00000193839 GfyJ3KML8 504 aa10.61□□□□□ -0.71
Pcdha1-202ENSMUST00000193839 Gm7102J3QQ10 178 aa10.61□□□□□ -0.71
Pcdha1-202ENSMUST00000193839 Vmo1Q5SXG7 201 aa10.61□□□□□ -0.71
Pcdha1-202ENSMUST00000193839 Piezo2Q8CD54 2822 aa10.61□□□□□ -0.71
Pcdha1-202ENSMUST00000193839 Lypd6Q8BPP5 171 aa10.61□□□□□ -0.71
Pcdha1-202ENSMUST00000193839 Cryba4Q9JJV0 196 aa10.61□□□□□ -0.71
Pcdha1-202ENSMUST00000193839 Igkv4-70A0A0B4J1I5 116 aa10.61□□□□□ -0.71
Pcdha1-202ENSMUST00000193839 P01820 115 aa10.6□□□□□ -0.71
Pcdha1-202ENSMUST00000193839 Atp5g3P56384 141 aa10.6□□□□□ -0.71
Pcdha1-202ENSMUST00000193839 Atp5g1Q9CR84 136 aa10.6□□□□□ -0.71
Pcdha1-202ENSMUST00000193839 Flg2Q2VIS4 2362 aa10.6□□□□□ -0.71
Pcdha1-202ENSMUST00000193839 Samd13D3YUG0 102 aa10.6□□□□□ -0.71
Pcdha1-202ENSMUST00000193839 Mrps12O35680 139 aa10.6□□□□□ -0.71
Pcdha1-202ENSMUST00000193839 Ncoa6Q9JL19 2067 aa10.6□□□□□ -0.71
Pcdha1-202ENSMUST00000193839 Ighv12-3A0A075B5T1 117 aa10.59□□□□□ -0.71
Pcdha1-202ENSMUST00000193839 Trav9-2A0A075B647 113 aa10.59□□□□□ -0.71
Pcdha1-202ENSMUST00000193839 Igkv2-137A0A0B4J1H6 120 aa10.59□□□□□ -0.71
Pcdha1-202ENSMUST00000193839 Trav9-4A0A0B4J1K2 113 aa10.59□□□□□ -0.71
Pcdha1-202ENSMUST00000193839 P01659 112 aa10.59□□□□□ -0.71
Pcdha1-202ENSMUST00000193839 Ang4Q3TMQ6 144 aa10.59□□□□□ -0.71
Pcdha1-202ENSMUST00000193839 Wfdc15bQ9JHY4 80 aa10.59□□□□□ -0.71
Pcdha1-202ENSMUST00000193839 Eml6Q5SQM0 1958 aa10.59□□□□□ -0.71
Pcdha1-202ENSMUST00000193839 1500011B03RikQ3TTH7 73 aa10.59□□□□□ -0.71
Pcdha1-202ENSMUST00000193839 NpbQ8K4P1 119 aa10.59□□□□□ -0.71
Pcdha1-202ENSMUST00000193839 Inafm2A0A1L1STD6 152 aa10.58□□□□□ -0.72
Pcdha1-202ENSMUST00000193839 Dad1P61804 113 aa10.58□□□□□ -0.72
Pcdha1-202ENSMUST00000193839 Fhl1P97447 280 aaKnown RBP10.58□□□□□ -0.72
Pcdha1-202ENSMUST00000193839 5730522E02RikQ5SP45 163 aa10.58□□□□□ -0.72
Pcdha1-202ENSMUST00000193839 GhrhP16043 103 aa10.58□□□□□ -0.72
Pcdha1-202ENSMUST00000193839 Foxi2Q3I5G5 311 aa10.58□□□□□ -0.72
Pcdha1-202ENSMUST00000193839 Vwc2lQ505H4 222 aa10.58□□□□□ -0.72
Pcdha1-202ENSMUST00000193839 Ndufa4l2Q4FZG9 87 aa10.58□□□□□ -0.72
Pcdha1-202ENSMUST00000193839 Igkv1-99F6XWB2 120 aa10.57□□□□□ -0.72
Pcdha1-202ENSMUST00000193839 Alms1Q8K4E0 3251 aa10.57□□□□□ -0.72
Pcdha1-202ENSMUST00000193839 Ighv1-53A0A075B5W3 117 aa10.57□□□□□ -0.72
Pcdha1-202ENSMUST00000193839 Znf740Q6NZQ6 180 aa10.57□□□□□ -0.72
Pcdha1-202ENSMUST00000193839 Trbv16A0A0B4J1H3 115 aa10.57□□□□□ -0.72
Pcdha1-202ENSMUST00000193839 Rnase1P00683 149 aa10.57□□□□□ -0.72
Pcdha1-202ENSMUST00000193839 Gata3P23772 443 aa10.57□□□□□ -0.72
Pcdha1-202ENSMUST00000193839 Odf3l1Q810P2 275 aa10.56□□□□□ -0.72
Pcdha1-202ENSMUST00000193839 4930415O20RikQ8CDT5 131 aa10.56□□□□□ -0.72
Pcdha1-202ENSMUST00000193839 Tmem263Q9DAM7 115 aa10.56□□□□□ -0.72
Pcdha1-202ENSMUST00000193839 Acyp1P56376 99 aa10.56□□□□□ -0.72
Pcdha1-202ENSMUST00000193839 Foxc1Q61572 553 aa10.56□□□□□ -0.72
Pcdha1-202ENSMUST00000193839 Ovol3D3YYM0 189 aa10.55□□□□□ -0.72
Pcdha1-202ENSMUST00000193839 Odf3Q920N1 254 aa10.55□□□□□ -0.72
Pcdha1-202ENSMUST00000193839 Ndufb4Q9CQC7 129 aa10.55□□□□□ -0.72
Pcdha1-202ENSMUST00000193839 Col4a2P08122 1707 aa10.55□□□□□ -0.72
Pcdha1-202ENSMUST00000193839 Ighv2-7A0A075B5Q8 116 aa10.55□□□□□ -0.72
Pcdha1-202ENSMUST00000193839 Gm5878E9PUB3 99 aa10.55□□□□□ -0.72
Pcdha1-202ENSMUST00000193839 Lamtor3O88653 124 aa10.55□□□□□ -0.72
Pcdha1-202ENSMUST00000193839 Rbmy1bQ60990 380 aa10.55□□□□□ -0.72
Pcdha1-202ENSMUST00000193839 Igkv4-53A0A0G2JFC6 119 aa10.55□□□□□ -0.72
Pcdha1-202ENSMUST00000193839 SetxA2AKX3 2646 aa10.54□□□□□ -0.72
Pcdha1-202ENSMUST00000193839 Gatd1Q8BFQ8 220 aa10.54□□□□□ -0.72
Pcdha1-202ENSMUST00000193839 Cox8cA6H666 72 aa10.54□□□□□ -0.72
Pcdha1-202ENSMUST00000193839 Cyyr1Q8VIH7 165 aa10.54□□□□□ -0.72
Pcdha1-202ENSMUST00000193839 Snai3Q9QY31 287 aa10.54□□□□□ -0.72
Pcdha1-202ENSMUST00000193839 Wisp2Q9Z0G4 251 aa10.54□□□□□ -0.72
Pcdha1-202ENSMUST00000193839 Glrp1E9Q9S8 174 aa10.54□□□□□ -0.72
Pcdha1-202ENSMUST00000193839 Sslp1Q3UN54 99 aa10.54□□□□□ -0.72
Pcdha1-202ENSMUST00000193839 Q99M08 65 aa10.53□□□□□ -0.72
Pcdha1-202ENSMUST00000193839 P01753 117 aa10.53□□□□□ -0.72
Pcdha1-202ENSMUST00000193839 Gm6040Q4QY32 63 aa10.53□□□□□ -0.72
Pcdha1-202ENSMUST00000193839 Gm17359A0A0G2JEB7 487 aa10.53□□□□□ -0.72
Pcdha1-202ENSMUST00000193839 Gm28539A0A087WSL9 92 aa10.52□□□□□ -0.72
Pcdha1-202ENSMUST00000193839 Tcte2E9PY37 120 aa10.52□□□□□ -0.72
Pcdha1-202ENSMUST00000193839 AW146154Q3TPQ7 468 aa10.52□□□□□ -0.72
Pcdha1-202ENSMUST00000193839 BC048502Q80Y74 154 aa10.52□□□□□ -0.73
Pcdha1-202ENSMUST00000193839 B230307C23RikQ8BLB2 64 aa10.52□□□□□ -0.73
Pcdha1-202ENSMUST00000193839 Pcnx2Q5DU28 2122 aa10.52□□□□□ -0.73
Pcdha1-202ENSMUST00000193839 Igkv3-1A0A075B5P1 119 aa10.52□□□□□ -0.73
Pcdha1-202ENSMUST00000193839 Gm10226O88253 85 aa10.52□□□□□ -0.73
Pcdha1-202ENSMUST00000193839 Col5a1O88207 1838 aa10.51□□□□□ -0.73
Pcdha1-202ENSMUST00000193839 BC107364E9Q5A2 140 aa10.51□□□□□ -0.73
Pcdha1-202ENSMUST00000193839 Egr2P08152 470 aa10.51□□□□□ -0.73
Pcdha1-202ENSMUST00000193839 C920008G01RikA0A0B4J1N1 112 aa10.51□□□□□ -0.73
Retrieved 100 of 22,080 RNA–protein pairs in 120.5 ms