RNA–Protein interactions for RNA: ENSMUST00000056508.11

Clcn3-202, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Clcn3, Length 5,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-202ENSMUST00000056508 A930002H24RikQ8C8Y3 163 aa6.39□□□□□ -1.39
Clcn3-202ENSMUST00000056508 Trip11E9Q512 1976 aa6.39□□□□□ -1.39
Clcn3-202ENSMUST00000056508 Igkv4-74A0A0B4J1I3 119 aa6.39□□□□□ -1.39
Clcn3-202ENSMUST00000056508 Igkv6-29A0A0G2JEI6 115 aa6.39□□□□□ -1.39
Clcn3-202ENSMUST00000056508 Ang5Q5GAN1 145 aa6.39□□□□□ -1.39
Clcn3-202ENSMUST00000056508 Phlpp1Q8CHE4 1687 aa6.39□□□□□ -1.39
Clcn3-202ENSMUST00000056508 Kndc1Q0KK55 1742 aa6.39□□□□□ -1.39
Clcn3-202ENSMUST00000056508 Igkv4-92A0A0B4J1I2 117 aa6.39□□□□□ -1.39
Clcn3-202ENSMUST00000056508 FcorP0DJI6 106 aa6.39□□□□□ -1.39
Clcn3-202ENSMUST00000056508 Ube2d2P62838 147 aa6.38□□□□□ -1.39
Clcn3-202ENSMUST00000056508 Gm15557A6PWY0 234 aa6.38□□□□□ -1.39
Clcn3-202ENSMUST00000056508 Gm3443F7CCV5 94 aa6.38□□□□□ -1.39
Clcn3-202ENSMUST00000056508 Igkv4-62A0A0G2JDW9 117 aa6.38□□□□□ -1.39
Clcn3-202ENSMUST00000056508 1700011M02RikB1AX35 88 aa6.38□□□□□ -1.39
Clcn3-202ENSMUST00000056508 9130213A22RikQ3V3T2 120 aa6.38□□□□□ -1.39
Clcn3-202ENSMUST00000056508 Msrb1Q9JLC3 116 aa6.38□□□□□ -1.39
Clcn3-202ENSMUST00000056508 Tnrc6aQ3UHK8 1896 aaKnown RBP6.38□□□□□ -1.39
Clcn3-202ENSMUST00000056508 Fndc1E9Q043 1732 aa6.38□□□□□ -1.39
Clcn3-202ENSMUST00000056508 Gm7257D3YX25 99 aa6.38□□□□□ -1.39
Clcn3-202ENSMUST00000056508 Gm11110Q3U4K9 109 aa6.38□□□□□ -1.39
Clcn3-202ENSMUST00000056508 Cacna1fQ9JIS7 1985 aa6.38□□□□□ -1.39
Clcn3-202ENSMUST00000056508 MyofQ69ZN7 2048 aaKnown RBP6.38□□□□□ -1.39
Clcn3-202ENSMUST00000056508 Igkv17-127A0A0G2JDN5 117 aa6.37□□□□□ -1.39
Clcn3-202ENSMUST00000056508 Rita1Q9D1H0 253 aa6.37□□□□□ -1.39
Clcn3-202ENSMUST00000056508 Ahnak2E9PYB0 1738 aaKnown RBP6.37□□□□□ -1.39
Clcn3-202ENSMUST00000056508 LenepQ9WVB6 61 aa6.36□□□□□ -1.39
Clcn3-202ENSMUST00000056508 Myh14Q6URW6 2000 aa6.36□□□□□ -1.39
Clcn3-202ENSMUST00000056508 Dicer1Q8R418 1916 aa6.36□□□□□ -1.39
Clcn3-202ENSMUST00000056508 Igkv3-10A0A0G2JGN0 119 aa6.36□□□□□ -1.39
Clcn3-202ENSMUST00000056508 Igkv6-14A0A140T8P1 115 aa6.36□□□□□ -1.39
Clcn3-202ENSMUST00000056508 Defb8Q91V82 60 aa6.36□□□□□ -1.39
Clcn3-202ENSMUST00000056508 Xrn1P97789 1719 aaKnown RBP6.36□□□□□ -1.39
Clcn3-202ENSMUST00000056508 Tjp1P39447 1745 aaKnown RBP6.36□□□□□ -1.39
Clcn3-202ENSMUST00000056508 Gm44965A0A0N4SVR3 59 aa6.36□□□□□ -1.39
Clcn3-202ENSMUST00000056508 Col14a1Q80X19 1797 aa6.36□□□□□ -1.39
Clcn3-202ENSMUST00000056508 Rnase2aQ8K196 155 aa6.36□□□□□ -1.39
Clcn3-202ENSMUST00000056508 Scn9aQ62205 1984 aa6.36□□□□□ -1.39
Clcn3-202ENSMUST00000056508 Igkv4-69A0A0B4J1I6 116 aa6.35□□□□□ -1.39
Clcn3-202ENSMUST00000056508 Igkv14-100A0A0G2JG36 117 aa6.35□□□□□ -1.39
Clcn3-202ENSMUST00000056508 Gm11939A2A592 99 aa6.35□□□□□ -1.39
Clcn3-202ENSMUST00000056508 ClpsQ9CQC2 113 aa6.35□□□□□ -1.39
Clcn3-202ENSMUST00000056508 Cacna1dQ99246 2179 aa6.35□□□□□ -1.39
Clcn3-202ENSMUST00000056508 Igkv1-117A0A140T8M0 119 aa6.35□□□□□ -1.39
Clcn3-202ENSMUST00000056508 7530416G11RikJ3QJX6 159 aa6.35□□□□□ -1.39
Clcn3-202ENSMUST00000056508 Gm26566Q8CAC1 153 aa6.35□□□□□ -1.39
Clcn3-202ENSMUST00000056508 Wnk3Q80XP9 1757 aa6.35□□□□□ -1.39
Clcn3-202ENSMUST00000056508 Gm17689B3GLJ4 109 aa6.34□□□□□ -1.39
Clcn3-202ENSMUST00000056508 Foxs1Q61574 329 aa6.34□□□□□ -1.39
Clcn3-202ENSMUST00000056508 P04944 107 aa6.34□□□□□ -1.39
Clcn3-202ENSMUST00000056508 Snai3Q9QY31 287 aa6.34□□□□□ -1.39
Clcn3-202ENSMUST00000056508 Gm9970F6ZED4 185 aa6.34□□□□□ -1.39
Clcn3-202ENSMUST00000056508 OxtP35454 125 aa6.34□□□□□ -1.39
Clcn3-202ENSMUST00000056508 Pde6hP61249 83 aa6.34□□□□□ -1.39
Clcn3-202ENSMUST00000056508 Gm27027S4R1M6 97 aa6.34□□□□□ -1.39
Clcn3-202ENSMUST00000056508 Abca15E9PWH4 1668 aa6.34□□□□□ -1.39
Clcn3-202ENSMUST00000056508 CitP49025 2055 aa6.34□□□□□ -1.39
Clcn3-202ENSMUST00000056508 Nrxn3Q6P9K9 1571 aa6.34□□□□□ -1.4
Clcn3-202ENSMUST00000056508 P04942 107 aa6.34□□□□□ -1.4
Clcn3-202ENSMUST00000056508 Tmem263Q9DAM7 115 aa6.34□□□□□ -1.4
Clcn3-202ENSMUST00000056508 Igkv8-26A0A075B5N5 123 aa6.33□□□□□ -1.4
Clcn3-202ENSMUST00000056508 Znrd1Q791N7 123 aa6.33□□□□□ -1.4
Clcn3-202ENSMUST00000056508 P04940 107 aa6.33□□□□□ -1.4
Clcn3-202ENSMUST00000056508 P04941 107 aa6.33□□□□□ -1.4
Clcn3-202ENSMUST00000056508 Rpl37aP61514 92 aa6.33□□□□□ -1.4
Clcn3-202ENSMUST00000056508 MobpQ9D2P8 170 aa6.33□□□□□ -1.4
Clcn3-202ENSMUST00000056508 Gm10401E9Q3K6 71 aa6.33□□□□□ -1.4
Clcn3-202ENSMUST00000056508 Gm9903Q8C9Y8 129 aa6.33□□□□□ -1.4
Clcn3-202ENSMUST00000056508 SycnQ8VCK7 134 aa6.32□□□□□ -1.4
Clcn3-202ENSMUST00000056508 Myo10F8VQB6 2062 aa6.32□□□□□ -1.4
Clcn3-202ENSMUST00000056508 Tff3Q62395 81 aa6.32□□□□□ -1.4
Clcn3-202ENSMUST00000056508 Igkv4-68A0A0B4J1I7 117 aa6.32□□□□□ -1.4
Clcn3-202ENSMUST00000056508 Gm17727E9Q4V7 109 aa6.32□□□□□ -1.4
Clcn3-202ENSMUST00000056508 Kidins220E9Q9B7 1793 aa6.32□□□□□ -1.4
Clcn3-202ENSMUST00000056508 Atp23Q9CWQ3 201 aa6.32□□□□□ -1.4
Clcn3-202ENSMUST00000056508 Lamb1P02469 1786 aa6.32□□□□□ -1.4
Clcn3-202ENSMUST00000056508 Igkv4-54A0A0G2JES9 117 aa6.32□□□□□ -1.4
Clcn3-202ENSMUST00000056508 Gm26661M0QWV4 156 aa6.31□□□□□ -1.4
Clcn3-202ENSMUST00000056508 Als2Q920R0 1651 aa6.31□□□□□ -1.4
Clcn3-202ENSMUST00000056508 Iglv3A0A0B4J1K5 122 aa6.31□□□□□ -1.4
Clcn3-202ENSMUST00000056508 Gm7714E9Q079 131 aa6.31□□□□□ -1.4
Clcn3-202ENSMUST00000056508 Wfdc18P62810 74 aa6.31□□□□□ -1.4
Clcn3-202ENSMUST00000056508 Frem3Q5H8B9 2123 aa6.31□□□□□ -1.4
Clcn3-202ENSMUST00000056508 Igkv4-59A0A0B4J1I8 117 aa6.31□□□□□ -1.4
Clcn3-202ENSMUST00000056508 Spink1P09036 80 aa6.31□□□□□ -1.4
Clcn3-202ENSMUST00000056508 Defb2P82020 71 aa6.31□□□□□ -1.4
Clcn3-202ENSMUST00000056508 Defb4P82019 63 aa6.3□□□□□ -1.4
Clcn3-202ENSMUST00000056508 Spint3Q3UW09 88 aa6.3□□□□□ -1.4
Clcn3-202ENSMUST00000056508 Tomm7Q9D173 55 aa6.3□□□□□ -1.4
Clcn3-202ENSMUST00000056508 Hcfc1Q61191 2045 aaKnown RBP6.3□□□□□ -1.4
Clcn3-202ENSMUST00000056508 Igkv4-63A0A0G2JFU6 117 aa6.3□□□□□ -1.4
Clcn3-202ENSMUST00000056508 Igkv4-61A0A0G2JH00 117 aa6.3□□□□□ -1.4
Clcn3-202ENSMUST00000056508 Gm13090A2A899 111 aa6.3□□□□□ -1.4
Clcn3-202ENSMUST00000056508 Ube2d4D3YUH6 135 aa6.3□□□□□ -1.4
Clcn3-202ENSMUST00000056508 Defb36Q8K3U4 67 aa6.3□□□□□ -1.4
Clcn3-202ENSMUST00000056508 Morn2Q6UL01 79 aa6.3□□□□□ -1.4
Clcn3-202ENSMUST00000056508 FocadA2AKG8 1798 aa6.3□□□□□ -1.4
Clcn3-202ENSMUST00000056508 Sipa1l1Q8C0T5 1782 aa6.3□□□□□ -1.4
Clcn3-202ENSMUST00000056508 Smr3aQ61900 147 aa6.3□□□□□ -1.4
Clcn3-202ENSMUST00000056508 PtprvP70289 1705 aa6.29□□□□□ -1.4
Clcn3-202ENSMUST00000056508 Igkv8-21A0A140T8P7 120 aa6.29□□□□□ -1.4
Retrieved 100 of 22,080 RNA–protein pairs in 72.3 ms