RNA–Protein interactions for RNA: ENSMUST00000031377.8

Scarb2-201, Transcript of Lysosome membrane protein 2, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scarb2, Length 4,698 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scarb2-201ENSMUST00000031377 Ighv1-49A0A0A6YWX2 117 aa10.31□□□□□ -0.76
Scarb2-201ENSMUST00000031377 Q9CX25 107 aa10.31□□□□□ -0.76
Scarb2-201ENSMUST00000031377 Tomm7Q9D173 55 aa10.31□□□□□ -0.76
Scarb2-201ENSMUST00000031377 Gm7075D3Z497 112 aa10.31□□□□□ -0.76
Scarb2-201ENSMUST00000031377 Rpl35aO55142 110 aa10.31□□□□□ -0.76
Scarb2-201ENSMUST00000031377 SpinklQ8CEK3 90 aa10.31□□□□□ -0.76
Scarb2-201ENSMUST00000031377 Rnf185Q91YT2 192 aa10.31□□□□□ -0.76
Scarb2-201ENSMUST00000031377 C920008G01RikA0A0B4J1N1 112 aa10.31□□□□□ -0.76
Scarb2-201ENSMUST00000031377 Rpl32-psP17932 135 aa10.31□□□□□ -0.76
Scarb2-201ENSMUST00000031377 Rtl10D3YWW5 146 aa10.3□□□□□ -0.76
Scarb2-201ENSMUST00000031377 Klk1b4P00757 256 aa10.3□□□□□ -0.76
Scarb2-201ENSMUST00000031377 NrgnP60761 78 aa10.3□□□□□ -0.76
Scarb2-201ENSMUST00000031377 Rpl36aP83882 106 aaKnown RBP10.3□□□□□ -0.76
Scarb2-201ENSMUST00000031377 Defb47Q30KN1 79 aa10.3□□□□□ -0.76
Scarb2-201ENSMUST00000031377 Defb26Q30KN7 186 aa10.3□□□□□ -0.76
Scarb2-201ENSMUST00000031377 Gm20499D3Z4G5 72 aa10.3□□□□□ -0.76
Scarb2-201ENSMUST00000031377 Gm2564F6Z9S8 108 aa10.3□□□□□ -0.76
Scarb2-201ENSMUST00000031377 Rmi2Q3UPE3 149 aa10.3□□□□□ -0.76
Scarb2-201ENSMUST00000031377 Snai3Q9QY31 287 aa10.3□□□□□ -0.76
Scarb2-201ENSMUST00000031377 Sigmar1O55242 223 aa10.3□□□□□ -0.76
Scarb2-201ENSMUST00000031377 Gm815Q3UWS2 115 aa10.3□□□□□ -0.76
Scarb2-201ENSMUST00000031377 Chchd5Q9CQP3 110 aa10.3□□□□□ -0.76
Scarb2-201ENSMUST00000031377 P01753 117 aa10.3□□□□□ -0.76
Scarb2-201ENSMUST00000031377 Gm7257D3YX25 99 aa10.29□□□□□ -0.76
Scarb2-201ENSMUST00000031377 Gm17455G3UW87 128 aa10.29□□□□□ -0.76
Scarb2-201ENSMUST00000031377 P18527 97 aa10.29□□□□□ -0.76
Scarb2-201ENSMUST00000031377 Tmem263Q9DAM7 115 aa10.29□□□□□ -0.76
Scarb2-201ENSMUST00000031377 Tcrg-C1A0A075B5Z0 172 aa10.29□□□□□ -0.76
Scarb2-201ENSMUST00000031377 P01747 120 aa10.29□□□□□ -0.76
Scarb2-201ENSMUST00000031377 HampQ9EQ21 83 aa10.29□□□□□ -0.76
Scarb2-201ENSMUST00000031377 Col5a1O88207 1838 aa10.29□□□□□ -0.76
Scarb2-201ENSMUST00000031377 Gm3285A0A1W2P7U0 201 aa10.28□□□□□ -0.76
Scarb2-201ENSMUST00000031377 Scgb1b2O35176 93 aa10.28□□□□□ -0.76
Scarb2-201ENSMUST00000031377 Fhl1P97447 280 aaKnown RBP10.28□□□□□ -0.76
Scarb2-201ENSMUST00000031377 MrapQ9D159 127 aa10.28□□□□□ -0.76
Scarb2-201ENSMUST00000031377 Ndufs7Q9DC70 224 aa10.28□□□□□ -0.76
Scarb2-201ENSMUST00000031377 Trav4n-4A0A075B615 110 aa10.28□□□□□ -0.76
Scarb2-201ENSMUST00000031377 P01837 106 aa10.28□□□□□ -0.76
Scarb2-201ENSMUST00000031377 Fam19a4Q7TPG5 135 aa10.28□□□□□ -0.76
Scarb2-201ENSMUST00000031377 A530064D06RikQ8BNV8 229 aa10.28□□□□□ -0.76
Scarb2-201ENSMUST00000031377 RetnQ99P87 114 aa10.28□□□□□ -0.76
Scarb2-201ENSMUST00000031377 Ndufb4Q9CQC7 129 aa10.28□□□□□ -0.76
Scarb2-201ENSMUST00000031377 Bahcc1Q3UHR0 2643 aa10.28□□□□□ -0.76
Scarb2-201ENSMUST00000031377 Ighv1-53A0A075B5W3 117 aa10.27□□□□□ -0.76
Scarb2-201ENSMUST00000031377 Ovol3D3YYM0 189 aa10.27□□□□□ -0.76
Scarb2-201ENSMUST00000031377 Igkv4-70A0A0B4J1I5 116 aa10.27□□□□□ -0.77
Scarb2-201ENSMUST00000031377 4930415O20RikQ8CDT5 131 aa10.27□□□□□ -0.77
Scarb2-201ENSMUST00000031377 Rnf114Q9ET26 229 aa10.27□□□□□ -0.77
Scarb2-201ENSMUST00000031377 Col4a2P08122 1707 aa10.27□□□□□ -0.77
Scarb2-201ENSMUST00000031377 Igkv4-74A0A0B4J1I3 119 aa10.27□□□□□ -0.77
Scarb2-201ENSMUST00000031377 Gm6793B2RXM2 351 aa10.27□□□□□ -0.77
Scarb2-201ENSMUST00000031377 Lmo4P61969 165 aa10.27□□□□□ -0.77
Scarb2-201ENSMUST00000031377 B430305J03RikQ8BQQ8 176 aa10.27□□□□□ -0.77
Scarb2-201ENSMUST00000031377 AW146154Q3TPQ7 468 aa10.26□□□□□ -0.77
Scarb2-201ENSMUST00000031377 Gm37988J3QM41 62 aa10.26□□□□□ -0.77
Scarb2-201ENSMUST00000031377 P06328 117 aa10.26□□□□□ -0.77
Scarb2-201ENSMUST00000031377 CtrlQ9ER05 264 aa10.26□□□□□ -0.77
Scarb2-201ENSMUST00000031377 Trav9n-2A0A0G2JDP3 113 aa10.25□□□□□ -0.77
Scarb2-201ENSMUST00000031377 Ly86O88188 162 aa10.25□□□□□ -0.77
Scarb2-201ENSMUST00000031377 P01738 130 aa10.25□□□□□ -0.77
Scarb2-201ENSMUST00000031377 P01786 117 aa10.25□□□□□ -0.77
Scarb2-201ENSMUST00000031377 1500011B03RikQ3TTH7 73 aa10.25□□□□□ -0.77
Scarb2-201ENSMUST00000031377 Samd5Q3V1H9 173 aa10.25□□□□□ -0.77
Scarb2-201ENSMUST00000031377 Gm16223Q8CBM3 117 aa10.25□□□□□ -0.77
Scarb2-201ENSMUST00000031377 Pfn2Q9JJV2 140 aa10.25□□□□□ -0.77
Scarb2-201ENSMUST00000031377 Gm5878E9PUB3 99 aa10.25□□□□□ -0.77
Scarb2-201ENSMUST00000031377 Ttc28Q80XJ3 2450 aa10.25□□□□□ -0.77
Scarb2-201ENSMUST00000031377 Smim10l1A0A087WNQ7 89 aa10.25□□□□□ -0.77
Scarb2-201ENSMUST00000031377 Edn2P22389 175 aa10.25□□□□□ -0.77
Scarb2-201ENSMUST00000031377 Mpv17l2Q8VIK2 200 aa10.25□□□□□ -0.77
Scarb2-201ENSMUST00000031377 Ighv1-82A0A0G2JEU7 117 aa10.25□□□□□ -0.77
Scarb2-201ENSMUST00000031377 Defa7P50705 93 aa10.24□□□□□ -0.77
Scarb2-201ENSMUST00000031377 Ighv2-7A0A075B5Q8 116 aa10.24□□□□□ -0.77
Scarb2-201ENSMUST00000031377 Ighv1-52A0A0A6YXC3 117 aa10.24□□□□□ -0.77
Scarb2-201ENSMUST00000031377 MsmbO08540 113 aa10.24□□□□□ -0.77
Scarb2-201ENSMUST00000031377 P01820 115 aa10.24□□□□□ -0.77
Scarb2-201ENSMUST00000031377 Gm1968Q3T9I3 115 aa10.24□□□□□ -0.77
Scarb2-201ENSMUST00000031377 Ube2wQ8VDW4 151 aa10.24□□□□□ -0.77
Scarb2-201ENSMUST00000031377 Myo9aQ8C170 2542 aa10.23□□□□□ -0.77
Scarb2-201ENSMUST00000031377 Lyzl4Q9D925 145 aa10.23□□□□□ -0.77
Scarb2-201ENSMUST00000031377 Ighv5-9-1A0A0A6YVS4 126 aa10.22□□□□□ -0.77
Scarb2-201ENSMUST00000031377 Srsf2Q62093 221 aaKnown RBP10.22□□□□□ -0.77
Scarb2-201ENSMUST00000031377 Triap1Q9D8Z2 76 aa10.22□□□□□ -0.77
Scarb2-201ENSMUST00000031377 Ccl24Q9JKC0 119 aa10.22□□□□□ -0.77
Scarb2-201ENSMUST00000031377 Trav13d-1A0A075B606 110 aa10.22□□□□□ -0.77
Scarb2-201ENSMUST00000031377 Trav3-4A0A075B654 114 aa10.22□□□□□ -0.77
Scarb2-201ENSMUST00000031377 TshbP12656 138 aa10.22□□□□□ -0.77
Scarb2-201ENSMUST00000031377 H1fxQ80ZM5 188 aa10.22□□□□□ -0.77
Scarb2-201ENSMUST00000031377 Mrpl35Q9CQL6 188 aa10.22□□□□□ -0.77
Scarb2-201ENSMUST00000031377 Pla2g2dQ9WVF6 144 aa10.22□□□□□ -0.77
Scarb2-201ENSMUST00000031377 Ndufa3Q9CQ91 84 aa10.22□□□□□ -0.77
Scarb2-201ENSMUST00000031377 Taf15Q8BQ46 557 aaKnown RBP10.22□□□□□ -0.77
Scarb2-201ENSMUST00000031377 Odf3Q920N1 254 aa10.22□□□□□ -0.77
Scarb2-201ENSMUST00000031377 Gm12057A0A087WR21 115 aa10.21□□□□□ -0.77
Scarb2-201ENSMUST00000031377 Prss58Q8BW11 241 aa10.21□□□□□ -0.77
Scarb2-201ENSMUST00000031377 1810032O08RikE9PZV8 113 aa10.21□□□□□ -0.77
Scarb2-201ENSMUST00000031377 Prrc2cQ3TLH4 2846 aaKnown RBP10.21□□□□□ -0.78
Scarb2-201ENSMUST00000031377 Hivep3A2A884 2348 aa10.21□□□□□ -0.78
Scarb2-201ENSMUST00000031377 Ebi3O35228 228 aa10.21□□□□□ -0.78
Scarb2-201ENSMUST00000031377 LeprotO89013 131 aa10.21□□□□□ -0.78
Retrieved 100 of 22,080 RNA–protein pairs in 72.6 ms