RNA–Protein interactions for RNA: ENSMUST00000020441.12

Vps13d-201, Transcript of Vacuolar protein sorting 13D, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Vps13d, Length 15,665 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13d-201ENSMUST00000020441 Trav3-4A0A075B654 114 aa4.3□□□□□ -1.72
Vps13d-201ENSMUST00000020441 P01750 117 aa4.3□□□□□ -1.72
Vps13d-201ENSMUST00000020441 Ang4Q3TMQ6 144 aa4.3□□□□□ -1.72
Vps13d-201ENSMUST00000020441 PtprbB2RU80 1998 aa4.3□□□□□ -1.72
Vps13d-201ENSMUST00000020441 Mtatp8P03930 67 aa4.3□□□□□ -1.72
Vps13d-201ENSMUST00000020441 Zfand3Q497H0 227 aa4.3□□□□□ -1.72
Vps13d-201ENSMUST00000020441 NbasE9Q411 2356 aa4.3□□□□□ -1.72
Vps13d-201ENSMUST00000020441 Gm21060J3KMU4 56 aa4.3□□□□□ -1.72
Vps13d-201ENSMUST00000020441 Znrd1Q791N7 123 aa4.3□□□□□ -1.72
Vps13d-201ENSMUST00000020441 Q8K1L6 76 aa4.3□□□□□ -1.72
Vps13d-201ENSMUST00000020441 Rif1Q6PR54 2419 aaKnown RBP4.3□□□□□ -1.72
Vps13d-201ENSMUST00000020441 Igkv4-72A0A0B4J1I4 117 aa4.3□□□□□ -1.72
Vps13d-201ENSMUST00000020441 Runx1Q03347 451 aa4.3□□□□□ -1.72
Vps13d-201ENSMUST00000020441 4933414I15RikQ9D4D5 133 aa4.3□□□□□ -1.72
Vps13d-201ENSMUST00000020441 1110002E22RikE0CYV9 1786 aa4.3□□□□□ -1.72
Vps13d-201ENSMUST00000020441 Lect2O88803 151 aa4.3□□□□□ -1.72
Vps13d-201ENSMUST00000020441 GrnP28798 589 aaKnown RBP4.3□□□□□ -1.72
Vps13d-201ENSMUST00000020441 Q9CX25 107 aa4.3□□□□□ -1.72
Vps13d-201ENSMUST00000020441 Chchd5Q9CQP3 110 aa4.29□□□□□ -1.72
Vps13d-201ENSMUST00000020441 Gm11020F6ZGD5 61 aa4.29□□□□□ -1.72
Vps13d-201ENSMUST00000020441 Clec4b2Q67DU8 208 aa4.29□□□□□ -1.72
Vps13d-201ENSMUST00000020441 Hoxb4P10284 250 aa4.29□□□□□ -1.72
Vps13d-201ENSMUST00000020441 Nop10Q9CQS2 64 aa4.29□□□□□ -1.72
Vps13d-201ENSMUST00000020441 Igkv4-61A0A0G2JH00 117 aa4.29□□□□□ -1.72
Vps13d-201ENSMUST00000020441 Tm2d2Q8R0I4 213 aa4.29□□□□□ -1.72
Vps13d-201ENSMUST00000020441 Cd33Q63994 403 aa4.29□□□□□ -1.72
Vps13d-201ENSMUST00000020441 BC048562Q80ZQ7 204 aa4.29□□□□□ -1.72
Vps13d-201ENSMUST00000020441 AW146154Q3TPQ7 468 aa4.29□□□□□ -1.72
Vps13d-201ENSMUST00000020441 Pla2g2dQ9WVF6 144 aa4.29□□□□□ -1.72
Vps13d-201ENSMUST00000020441 Gm19684G3UZ45 117 aa4.29□□□□□ -1.72
Vps13d-201ENSMUST00000020441 Pfn2Q9JJV2 140 aa4.29□□□□□ -1.72
Vps13d-201ENSMUST00000020441 E130218I03RikA0A0U1RNU5 63 aa4.29□□□□□ -1.72
Vps13d-201ENSMUST00000020441 Ndufa4l2Q4FZG9 87 aa4.29□□□□□ -1.72
Vps13d-201ENSMUST00000020441 Ighv1-75A0A075B5Y2 117 aa4.29□□□□□ -1.72
Vps13d-201ENSMUST00000020441 BikO70337 150 aa4.29□□□□□ -1.72
Vps13d-201ENSMUST00000020441 C2cd3Q52KB6 2323 aa4.29□□□□□ -1.72
Vps13d-201ENSMUST00000020441 Fam24aQ8CF27 98 aa4.29□□□□□ -1.72
Vps13d-201ENSMUST00000020441 IgipA0A1B0GR74 53 aa4.28□□□□□ -1.72
Vps13d-201ENSMUST00000020441 Ociad2Q9D8W7 154 aa4.28□□□□□ -1.72
Vps13d-201ENSMUST00000020441 Gm10638F6QEG2 257 aa4.28□□□□□ -1.72
Vps13d-201ENSMUST00000020441 Tcl1b5P56845 121 aa4.28□□□□□ -1.72
Vps13d-201ENSMUST00000020441 Lyg1Q9D7Q0 197 aa4.28□□□□□ -1.72
Vps13d-201ENSMUST00000020441 Gm20604F8WIA3 75 aa4.28□□□□□ -1.72
Vps13d-201ENSMUST00000020441 CstadQ9D245 104 aa4.28□□□□□ -1.72
Vps13d-201ENSMUST00000020441 Gm21994F6T2D2 329 aa4.28□□□□□ -1.72
Vps13d-201ENSMUST00000020441 Odf3l1Q810P2 275 aa4.28□□□□□ -1.72
Vps13d-201ENSMUST00000020441 1700010B08RikQ9DAI7 102 aa4.28□□□□□ -1.72
Vps13d-201ENSMUST00000020441 Gm9958Q8C9U4 106 aa4.28□□□□□ -1.72
Vps13d-201ENSMUST00000020441 Pcsk5Q04592 1877 aa4.28□□□□□ -1.72
Vps13d-201ENSMUST00000020441 Ighv1-11A0A0A6YWI9 117 aa4.28□□□□□ -1.72
Vps13d-201ENSMUST00000020441 Ighv1-61P01749 117 aa4.28□□□□□ -1.72
Vps13d-201ENSMUST00000020441 TroQ6DIC6 2087 aa4.28□□□□□ -1.72
Vps13d-201ENSMUST00000020441 Col5a3Q9JLI2 1739 aa4.28□□□□□ -1.72
Vps13d-201ENSMUST00000020441 P01793 123 aa4.28□□□□□ -1.72
Vps13d-201ENSMUST00000020441 Fxyd7P59648 80 aa4.28□□□□□ -1.72
Vps13d-201ENSMUST00000020441 Sox16Q62247 57 aa4.27□□□□□ -1.73
Vps13d-201ENSMUST00000020441 NpyP57774 97 aa4.27□□□□□ -1.73
Vps13d-201ENSMUST00000020441 Tm2d1Q99MB3 208 aa4.27□□□□□ -1.73
Vps13d-201ENSMUST00000020441 Igkv4-59A0A0B4J1I8 117 aa4.27□□□□□ -1.73
Vps13d-201ENSMUST00000020441 Igkv4-54A0A0G2JES9 117 aa4.27□□□□□ -1.73
Vps13d-201ENSMUST00000020441 Ndufc1Q9CQY9 76 aa4.27□□□□□ -1.73
Vps13d-201ENSMUST00000020441 Defb3Q9WTL0 63 aa4.27□□□□□ -1.73
Vps13d-201ENSMUST00000020441 Prok1Q14A28 105 aa4.27□□□□□ -1.73
Vps13d-201ENSMUST00000020441 B9d2Q3UK10 175 aa4.27□□□□□ -1.73
Vps13d-201ENSMUST00000020441 Gm5629P06327 117 aa4.27□□□□□ -1.73
Vps13d-201ENSMUST00000020441 Ighv6-7A0A0A6YWU3 119 aa4.27□□□□□ -1.73
Vps13d-201ENSMUST00000020441 Mrps12O35680 139 aa4.27□□□□□ -1.73
Vps13d-201ENSMUST00000020441 9230109A22RikQ8BHE6 111 aa4.27□□□□□ -1.73
Vps13d-201ENSMUST00000020441 P01794 123 aa4.27□□□□□ -1.73
Vps13d-201ENSMUST00000020441 B230307C23RikQ8BLB2 64 aa4.27□□□□□ -1.73
Vps13d-201ENSMUST00000020441 Ighv2-6-8A0A0A6YWY9 116 aa4.27□□□□□ -1.73
Vps13d-201ENSMUST00000020441 Prop1P97458 223 aa4.27□□□□□ -1.73
Vps13d-201ENSMUST00000020441 Pip4p1Q3TWL2 284 aa4.27□□□□□ -1.73
Vps13d-201ENSMUST00000020441 PrcdQ00LT2 53 aa4.27□□□□□ -1.73
Vps13d-201ENSMUST00000020441 Sdk1Q3UH53 2193 aa4.26□□□□□ -1.73
Vps13d-201ENSMUST00000020441 Igkv4-69A0A0B4J1I6 116 aa4.26□□□□□ -1.73
Vps13d-201ENSMUST00000020441 Ighv8-4A0A0A6YW26 117 aa4.26□□□□□ -1.73
Vps13d-201ENSMUST00000020441 Ighv1-5A0A0A6YWG2 117 aa4.26□□□□□ -1.73
Vps13d-201ENSMUST00000020441 Gm15557A6PWY0 234 aa4.26□□□□□ -1.73
Vps13d-201ENSMUST00000020441 P01643 108 aa4.26□□□□□ -1.73
Vps13d-201ENSMUST00000020441 Fgfbp3Q1HCM0 245 aa4.26□□□□□ -1.73
Vps13d-201ENSMUST00000020441 Ube2bP63147 152 aa4.26□□□□□ -1.73
Vps13d-201ENSMUST00000020441 Smim20D3Z7Q2 69 aa4.26□□□□□ -1.73
Vps13d-201ENSMUST00000020441 Tmem254aP0DN89 123 aa4.26□□□□□ -1.73
Vps13d-201ENSMUST00000020441 Tmem254bP0DN90 123 aa4.26□□□□□ -1.73
Vps13d-201ENSMUST00000020441 Tmem254cP0DN91 123 aa4.26□□□□□ -1.73
Vps13d-201ENSMUST00000020441 Ndufa3Q9CQ91 84 aa4.26□□□□□ -1.73
Vps13d-201ENSMUST00000020441 Adamts20P59511 1906 aa4.26□□□□□ -1.73
Vps13d-201ENSMUST00000020441 Ighv1-85A0A075B5Y6 117 aa4.26□□□□□ -1.73
Vps13d-201ENSMUST00000020441 Trav11A0A0B4J1J9 114 aa4.26□□□□□ -1.73
Vps13d-201ENSMUST00000020441 P01753 117 aa4.26□□□□□ -1.73
Vps13d-201ENSMUST00000020441 Gm10735Q3US96 136 aa4.26□□□□□ -1.73
Vps13d-201ENSMUST00000020441 Igkv4-79A0A075B5L8 119 aa4.25□□□□□ -1.73
Vps13d-201ENSMUST00000020441 Igkv8-18A0A0B4J1J3 123 aa4.25□□□□□ -1.73
Vps13d-201ENSMUST00000020441 Fam110dQ80X91 271 aa4.25□□□□□ -1.73
Vps13d-201ENSMUST00000020441 Nav2E9Q842 2432 aa4.25□□□□□ -1.73
Vps13d-201ENSMUST00000020441 MsmpB1AWI6 139 aa4.25□□□□□ -1.73
Vps13d-201ENSMUST00000020441 P01674 108 aa4.25□□□□□ -1.73
Vps13d-201ENSMUST00000020441 Gm16503Q8C6M9 103 aa4.25□□□□□ -1.73
Vps13d-201ENSMUST00000020441 P01791 123 aa4.25□□□□□ -1.73
Retrieved 100 of 22,080 RNA–protein pairs in 35.6 ms