RNA–Protein interactions for RNA: ENSMUST00000015981.11

Sqstm1-201, Transcript of Sequestosome-1, mousemouse

TSL 1 (best) BASIC

Gene Sqstm1, Length 2,673 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sqstm1-201ENSMUST00000015981 F11rO88792 300 aa13.33□□□□□ -0.28
Sqstm1-201ENSMUST00000015981 Wdr38Q9D994 303 aa13.33□□□□□ -0.28
Sqstm1-201ENSMUST00000015981 Sptbn1Q62261 2363 aaKnown RBP13.32□□□□□ -0.28
Sqstm1-201ENSMUST00000015981 P84751 237 aa13.32□□□□□ -0.28
Sqstm1-201ENSMUST00000015981 Defb30Q30KN4 75 aa13.32□□□□□ -0.28
Sqstm1-201ENSMUST00000015981 Lyzl4Q9D925 145 aa13.32□□□□□ -0.28
Sqstm1-201ENSMUST00000015981 Timm17aQ9Z0V8 171 aa13.32□□□□□ -0.28
Sqstm1-201ENSMUST00000015981 March3Q8BRX9 218 aa13.32□□□□□ -0.28
Sqstm1-201ENSMUST00000015981 Igkv4-57-1A0A075B5M4 119 aa13.31□□□□□ -0.28
Sqstm1-201ENSMUST00000015981 Gm26661M0QWV4 156 aa13.31□□□□□ -0.28
Sqstm1-201ENSMUST00000015981 Lect2O88803 151 aa13.31□□□□□ -0.28
Sqstm1-201ENSMUST00000015981 Gm21748Q3UE70 102 aa13.31□□□□□ -0.28
Sqstm1-201ENSMUST00000015981 PkigO70139 76 aa13.3□□□□□ -0.28
Sqstm1-201ENSMUST00000015981 Spink10Q8CAC8 162 aa13.3□□□□□ -0.28
Sqstm1-201ENSMUST00000015981 Mrpl35Q9CQL6 188 aa13.3□□□□□ -0.28
Sqstm1-201ENSMUST00000015981 Ankrd39Q9D2X0 183 aa13.3□□□□□ -0.28
Sqstm1-201ENSMUST00000015981 Gm6793B2RXM2 351 aa13.3□□□□□ -0.28
Sqstm1-201ENSMUST00000015981 Atp5g3P56384 141 aa13.3□□□□□ -0.28
Sqstm1-201ENSMUST00000015981 Rbmy1bQ60990 380 aa13.3□□□□□ -0.28
Sqstm1-201ENSMUST00000015981 Cep250Q60952 2414 aa13.29□□□□□ -0.28
Sqstm1-201ENSMUST00000015981 LeprotO89013 131 aa13.29□□□□□ -0.28
Sqstm1-201ENSMUST00000015981 P01739 132 aa13.29□□□□□ -0.28
Sqstm1-201ENSMUST00000015981 P06328 117 aa13.29□□□□□ -0.28
Sqstm1-201ENSMUST00000015981 Gm904Q3V2L5 102 aa13.29□□□□□ -0.28
Sqstm1-201ENSMUST00000015981 Ube2wQ8VDW4 151 aa13.29□□□□□ -0.28
Sqstm1-201ENSMUST00000015981 Ighv1-66A0A075B5X5 117 aa13.29□□□□□ -0.28
Sqstm1-201ENSMUST00000015981 Mpv17l2Q8VIK2 200 aa13.29□□□□□ -0.28
Sqstm1-201ENSMUST00000015981 Higd1aQ9JLR9 95 aa13.29□□□□□ -0.28
Sqstm1-201ENSMUST00000015981 Hes7Q8BKT2 225 aa13.28□□□□□ -0.28
Sqstm1-201ENSMUST00000015981 Gphb5Q812B2 130 aa13.28□□□□□ -0.28
Sqstm1-201ENSMUST00000015981 Zc2hc1bQ9D534 172 aa13.28□□□□□ -0.28
Sqstm1-201ENSMUST00000015981 Cxcl14Q9WUQ5 99 aa13.28□□□□□ -0.28
Sqstm1-201ENSMUST00000015981 Ighv1-5A0A0A6YWG2 117 aa13.27□□□□□ -0.28
Sqstm1-201ENSMUST00000015981 FcorP0DJI6 106 aa13.27□□□□□ -0.28
Sqstm1-201ENSMUST00000015981 SmcpP15265 143 aa13.27□□□□□ -0.28
Sqstm1-201ENSMUST00000015981 Rpl11Q9CXW4 178 aaKnown RBP13.27□□□□□ -0.29
Sqstm1-201ENSMUST00000015981 Tmem263Q9DAM7 115 aa13.27□□□□□ -0.29
Sqstm1-201ENSMUST00000015981 Piezo1E2JF22 2547 aa13.27□□□□□ -0.29
Sqstm1-201ENSMUST00000015981 1500011B03RikQ3TTH7 73 aa13.26□□□□□ -0.29
Sqstm1-201ENSMUST00000015981 Ss18l2Q9D174 77 aa13.26□□□□□ -0.29
Sqstm1-201ENSMUST00000015981 Prr3Q811B5 190 aaKnown RBP13.26□□□□□ -0.29
Sqstm1-201ENSMUST00000015981 Ins2P01326 110 aa13.26□□□□□ -0.29
Sqstm1-201ENSMUST00000015981 E130116L18RikQ8BMV6 101 aa13.26□□□□□ -0.29
Sqstm1-201ENSMUST00000015981 Zfhx3Q61329 3726 aa13.25□□□□□ -0.29
Sqstm1-201ENSMUST00000015981 Gm9936Q8C864 160 aa13.25□□□□□ -0.29
Sqstm1-201ENSMUST00000015981 1700067P10RikG3X8U2 183 aa13.25□□□□□ -0.29
Sqstm1-201ENSMUST00000015981 Rasl11bQ922H7 247 aa13.25□□□□□ -0.29
Sqstm1-201ENSMUST00000015981 Ighv3-8A0A075B5T0 131 aa13.24□□□□□ -0.29
Sqstm1-201ENSMUST00000015981 Defb20Q30KP3 96 aa13.24□□□□□ -0.29
Sqstm1-201ENSMUST00000015981 Mfap4Q9D1H9 257 aa13.24□□□□□ -0.29
Sqstm1-201ENSMUST00000015981 Gm29423A0A087WRM1 55 aa13.23□□□□□ -0.29
Sqstm1-201ENSMUST00000015981 AY761184Q9D848 116 aa13.23□□□□□ -0.29
Sqstm1-201ENSMUST00000015981 Hcfc1Q61191 2045 aaKnown RBP13.23□□□□□ -0.29
Sqstm1-201ENSMUST00000015981 Trav7-6A0A075B640 112 aa13.23□□□□□ -0.29
Sqstm1-201ENSMUST00000015981 Dopey2Q3UHQ6 2295 aa13.22□□□□□ -0.29
Sqstm1-201ENSMUST00000015981 Tcte2E9PY37 120 aa13.22□□□□□ -0.29
Sqstm1-201ENSMUST00000015981 Gm10767Q3TQP0 103 aa13.22□□□□□ -0.29
Sqstm1-201ENSMUST00000015981 Foxc1Q61572 553 aa13.22□□□□□ -0.29
Sqstm1-201ENSMUST00000015981 Morn3Q8C5T4 241 aa13.22□□□□□ -0.29
Sqstm1-201ENSMUST00000015981 Gm17732E9Q5I2 61 aa13.22□□□□□ -0.29
Sqstm1-201ENSMUST00000015981 P01750 117 aa13.21□□□□□ -0.29
Sqstm1-201ENSMUST00000015981 Ube2e1P52482 193 aa13.21□□□□□ -0.29
Sqstm1-201ENSMUST00000015981 C1qcQ02105 246 aa13.21□□□□□ -0.29
Sqstm1-201ENSMUST00000015981 Ighv1-52A0A0A6YXC3 117 aa13.21□□□□□ -0.3
Sqstm1-201ENSMUST00000015981 Nsun4C4P6S0 806 aaKnown RBP13.21□□□□□ -0.3
Sqstm1-201ENSMUST00000015981 LhbO09108 141 aa13.21□□□□□ -0.3
Sqstm1-201ENSMUST00000015981 Ly6gP35461 111 aa13.21□□□□□ -0.3
Sqstm1-201ENSMUST00000015981 FshbQ60687 130 aa13.21□□□□□ -0.3
Sqstm1-201ENSMUST00000015981 A530064D06RikQ8BNV8 229 aa13.21□□□□□ -0.3
Sqstm1-201ENSMUST00000015981 Trank1Q8BV79 2999 aa13.2□□□□□ -0.3
Sqstm1-201ENSMUST00000015981 TtrP07309 147 aa13.2□□□□□ -0.3
Sqstm1-201ENSMUST00000015981 Edn3P48299 214 aa13.2□□□□□ -0.3
Sqstm1-201ENSMUST00000015981 Mettl26Q9DCS2 204 aa13.2□□□□□ -0.3
Sqstm1-201ENSMUST00000015981 Trav4d-3A0A075B625 110 aa13.19□□□□□ -0.3
Sqstm1-201ENSMUST00000015981 Ighv1-85A0A075B5Y6 117 aa13.19□□□□□ -0.3
Sqstm1-201ENSMUST00000015981 Ighv1-64A0A075B5X3 117 aa13.18□□□□□ -0.3
Sqstm1-201ENSMUST00000015981 Trav3-4A0A075B654 114 aa13.18□□□□□ -0.3
Sqstm1-201ENSMUST00000015981 Trbv16A0A0B4J1H3 115 aa13.18□□□□□ -0.3
Sqstm1-201ENSMUST00000015981 Gm20499D3Z4G5 72 aa13.18□□□□□ -0.3
Sqstm1-201ENSMUST00000015981 P01726 129 aa13.18□□□□□ -0.3
Sqstm1-201ENSMUST00000015981 CenpwQ3URR0 86 aa13.18□□□□□ -0.3
Sqstm1-201ENSMUST00000015981 Cfap126Q6P8X9 189 aa13.18□□□□□ -0.3
Sqstm1-201ENSMUST00000015981 Ncor1Q60974 2453 aa13.18□□□□□ -0.3
Sqstm1-201ENSMUST00000015981 Pglyrp1O88593 182 aa13.17□□□□□ -0.3
Sqstm1-201ENSMUST00000015981 Fbn2Q61555 2907 aa13.17□□□□□ -0.3
Sqstm1-201ENSMUST00000015981 Fam19a4Q7TPG5 135 aa13.17□□□□□ -0.3
Sqstm1-201ENSMUST00000015981 Ndufb4Q9CQC7 129 aa13.17□□□□□ -0.3
Sqstm1-201ENSMUST00000015981 Ndufa3Q9CQ91 84 aa13.16□□□□□ -0.3
Sqstm1-201ENSMUST00000015981 Ighv1-50A0A075B5W1 117 aa13.16□□□□□ -0.3
Sqstm1-201ENSMUST00000015981 Ighv1-12A0A0A6YXJ9 117 aa13.16□□□□□ -0.3
Sqstm1-201ENSMUST00000015981 Tmem101Q91VP7 257 aa13.16□□□□□ -0.3
Sqstm1-201ENSMUST00000015981 Gata1P17679 413 aa13.15□□□□□ -0.3
Sqstm1-201ENSMUST00000015981 Lrcol1Q3URS3 161 aa13.15□□□□□ -0.3
Sqstm1-201ENSMUST00000015981 Cox6cQ9CPQ1 76 aa13.15□□□□□ -0.3
Sqstm1-201ENSMUST00000015981 4930442H23RikQ9D5G7 103 aa13.15□□□□□ -0.3
Sqstm1-201ENSMUST00000015981 Gm10521E9PZK0 135 aa13.14□□□□□ -0.31
Sqstm1-201ENSMUST00000015981 P01820 115 aa13.14□□□□□ -0.31
Sqstm1-201ENSMUST00000015981 Gm17334Q8C6U3 126 aa13.14□□□□□ -0.31
Sqstm1-201ENSMUST00000015981 Egr1P08046 533 aa13.14□□□□□ -0.31
Sqstm1-201ENSMUST00000015981 SbsponQ3UPR9 264 aa13.14□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 50.1 ms