RNA–Protein interactions for RNA: ENSMUST00000225438.1

Shroom3-211, Transcript of Protein Shroom3, mousemouse

BASIC

Gene Shroom3, Length 5,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3-211ENSMUST00000225438 Ccl25O35903 144 aa13.53□□□□□ -0.24
Shroom3-211ENSMUST00000225438 Ang4Q3TMQ6 144 aa13.53□□□□□ -0.24
Shroom3-211ENSMUST00000225438 Zic4Q61467 341 aa13.52□□□□□ -0.24
Shroom3-211ENSMUST00000225438 Igkv8-26A0A075B5N5 123 aa13.52□□□□□ -0.25
Shroom3-211ENSMUST00000225438 Cd300eQ8K249 196 aa13.52□□□□□ -0.25
Shroom3-211ENSMUST00000225438 Gm20730A0A075B5J6 119 aa13.52□□□□□ -0.25
Shroom3-211ENSMUST00000225438 Fam241bQ9D882 120 aa13.52□□□□□ -0.25
Shroom3-211ENSMUST00000225438 Trav12-3A0A075B648 115 aa13.52□□□□□ -0.25
Shroom3-211ENSMUST00000225438 BB014433Q8C5R5 389 aa13.51□□□□□ -0.25
Shroom3-211ENSMUST00000225438 P01756 117 aa13.51□□□□□ -0.25
Shroom3-211ENSMUST00000225438 P01757 117 aa13.51□□□□□ -0.25
Shroom3-211ENSMUST00000225438 Klhdc3Q8VEM9 382 aa13.51□□□□□ -0.25
Shroom3-211ENSMUST00000225438 Atp6v0e2Q91XE7 81 aa13.51□□□□□ -0.25
Shroom3-211ENSMUST00000225438 Atp5g3P56384 141 aa13.5□□□□□ -0.25
Shroom3-211ENSMUST00000225438 Atp5g1Q9CR84 136 aa13.5□□□□□ -0.25
Shroom3-211ENSMUST00000225438 Igkv1-122A0A140T8M9 119 aa13.5□□□□□ -0.25
Shroom3-211ENSMUST00000225438 Q99M08 65 aa13.5□□□□□ -0.25
Shroom3-211ENSMUST00000225438 P01753 117 aa13.49□□□□□ -0.25
Shroom3-211ENSMUST00000225438 Odf1Q61999 247 aa13.49□□□□□ -0.25
Shroom3-211ENSMUST00000225438 Dmrtc1c1Q9D410 238 aa13.49□□□□□ -0.25
Shroom3-211ENSMUST00000225438 Nbl1Q61477 178 aa13.49□□□□□ -0.25
Shroom3-211ENSMUST00000225438 Bex1Q9R224 128 aa13.49□□□□□ -0.25
Shroom3-211ENSMUST00000225438 P04942 107 aa13.49□□□□□ -0.25
Shroom3-211ENSMUST00000225438 Plxna4Q80UG2 1893 aa13.48□□□□□ -0.25
Shroom3-211ENSMUST00000225438 PrcdQ00LT2 53 aa13.48□□□□□ -0.25
Shroom3-211ENSMUST00000225438 Gp9O88186 177 aa13.48□□□□□ -0.25
Shroom3-211ENSMUST00000225438 Prh1P05142 261 aa13.48□□□□□ -0.25
Shroom3-211ENSMUST00000225438 Hoxb4P10284 250 aa13.48□□□□□ -0.25
Shroom3-211ENSMUST00000225438 P01745 121 aa13.48□□□□□ -0.25
Shroom3-211ENSMUST00000225438 Tm2d2Q8R0I4 213 aa13.47□□□□□ -0.25
Shroom3-211ENSMUST00000225438 BlcapP62951 87 aa13.47□□□□□ -0.25
Shroom3-211ENSMUST00000225438 Tm2d1Q99MB3 208 aa13.47□□□□□ -0.25
Shroom3-211ENSMUST00000225438 Prpf8Q99PV0 2335 aaKnown RBP13.47□□□□□ -0.25
Shroom3-211ENSMUST00000225438 Ighv3-1A0A075B5S6 116 aa13.47□□□□□ -0.25
Shroom3-211ENSMUST00000225438 Atg2aQ6P4T0 1914 aa13.47□□□□□ -0.25
Shroom3-211ENSMUST00000225438 Adamts9E9PUN6 1931 aa13.47□□□□□ -0.25
Shroom3-211ENSMUST00000225438 Lst1O08843 95 aa13.46□□□□□ -0.25
Shroom3-211ENSMUST00000225438 Fam240bJ3QMB3 78 aa13.46□□□□□ -0.25
Shroom3-211ENSMUST00000225438 Trav6n-6A0A075B6B2 114 aa13.46□□□□□ -0.26
Shroom3-211ENSMUST00000225438 Gm9913Q8BQQ2 135 aa13.46□□□□□ -0.26
Shroom3-211ENSMUST00000225438 Cox7a1P56392 80 aa13.46□□□□□ -0.26
Shroom3-211ENSMUST00000225438 Tnrc6aQ3UHK8 1896 aaKnown RBP13.46□□□□□ -0.26
Shroom3-211ENSMUST00000225438 Obsl1D3YYU8 1804 aaKnown RBP13.45□□□□□ -0.26
Shroom3-211ENSMUST00000225438 1500011B03RikQ3TTH7 73 aa13.45□□□□□ -0.26
Shroom3-211ENSMUST00000225438 Arfgef3Q3UGY8 2170 aa13.45□□□□□ -0.26
Shroom3-211ENSMUST00000225438 Ucn2Q99ML8 113 aa13.44□□□□□ -0.26
Shroom3-211ENSMUST00000225438 Gm17455G3UW87 128 aa13.44□□□□□ -0.26
Shroom3-211ENSMUST00000225438 Nxph4G3X9N5 304 aa13.44□□□□□ -0.26
Shroom3-211ENSMUST00000225438 Ndufb4Q9CQC7 129 aa13.44□□□□□ -0.26
Shroom3-211ENSMUST00000225438 Spry4Q9WTP2 300 aa13.44□□□□□ -0.26
Shroom3-211ENSMUST00000225438 Cfap126Q6P8X9 189 aa13.43□□□□□ -0.26
Shroom3-211ENSMUST00000225438 PtprfA2A8L5 1898 aa13.43□□□□□ -0.26
Shroom3-211ENSMUST00000225438 1700012A03RikQ9DAF1 130 aa13.43□□□□□ -0.26
Shroom3-211ENSMUST00000225438 Gm15217A2CG07 155 aa13.43□□□□□ -0.26
Shroom3-211ENSMUST00000225438 Plscr4P58196 326 aa13.43□□□□□ -0.26
Shroom3-211ENSMUST00000225438 Igkv8-18A0A0B4J1J3 123 aa13.43□□□□□ -0.26
Shroom3-211ENSMUST00000225438 Gata1P17679 413 aa13.43□□□□□ -0.26
Shroom3-211ENSMUST00000225438 Znrf2Q71FD5 238 aa13.43□□□□□ -0.26
Shroom3-211ENSMUST00000225438 Gm10251J3QPM5 127 aa13.42□□□□□ -0.26
Shroom3-211ENSMUST00000225438 Gm9936Q8C864 160 aa13.42□□□□□ -0.26
Shroom3-211ENSMUST00000225438 Gm2916Q9D9B9 127 aa13.42□□□□□ -0.26
Shroom3-211ENSMUST00000225438 Gm6034E9Q101 117 aa13.41□□□□□ -0.26
Shroom3-211ENSMUST00000225438 Gm19684G3UZ45 117 aa13.41□□□□□ -0.26
Shroom3-211ENSMUST00000225438 9230109A22RikQ8BHE6 111 aa13.41□□□□□ -0.26
Shroom3-211ENSMUST00000225438 MifP34884 115 aaKnown RBP13.41□□□□□ -0.26
Shroom3-211ENSMUST00000225438 OdaphJ3QNT8 126 aa13.41□□□□□ -0.26
Shroom3-211ENSMUST00000225438 Glrp1E9Q9S8 174 aa13.4□□□□□ -0.26
Shroom3-211ENSMUST00000225438 Rbm3O89086 153 aaKnown RBP13.4□□□□□ -0.26
Shroom3-211ENSMUST00000225438 Znf672Q99LH4 468 aa13.4□□□□□ -0.26
Shroom3-211ENSMUST00000225438 Tmem258P61166 79 aa13.4□□□□□ -0.26
Shroom3-211ENSMUST00000225438 Tmem243B2RVB9 118 aa13.4□□□□□ -0.26
Shroom3-211ENSMUST00000225438 B9d2Q3UK10 175 aa13.4□□□□□ -0.26
Shroom3-211ENSMUST00000225438 Gm10518F6UQQ9 182 aa13.39□□□□□ -0.27
Shroom3-211ENSMUST00000225438 Defb47Q30KN1 79 aa13.39□□□□□ -0.27
Shroom3-211ENSMUST00000225438 Cox7b2Q9D2H1 82 aa13.39□□□□□ -0.27
Shroom3-211ENSMUST00000225438 Ang3P97802 145 aa13.39□□□□□ -0.27
Shroom3-211ENSMUST00000225438 Clec4b2Q67DU8 208 aa13.39□□□□□ -0.27
Shroom3-211ENSMUST00000225438 Sec16aA2AIX1 2377 aa13.39□□□□□ -0.27
Shroom3-211ENSMUST00000225438 Gm15128A2ADW8 449 aa13.39□□□□□ -0.27
Shroom3-211ENSMUST00000225438 Gm15093A2BI72 449 aa13.39□□□□□ -0.27
Shroom3-211ENSMUST00000225438 Gm15557A6PWY0 234 aa13.39□□□□□ -0.27
Shroom3-211ENSMUST00000225438 Luzp4B1AV09 449 aa13.39□□□□□ -0.27
Shroom3-211ENSMUST00000225438 Gm15127B1AVZ5 449 aa13.39□□□□□ -0.27
Shroom3-211ENSMUST00000225438 Gm15107B1B0X0 449 aa13.39□□□□□ -0.27
Shroom3-211ENSMUST00000225438 Gm15097E9QA14 449 aa13.39□□□□□ -0.27
Shroom3-211ENSMUST00000225438 Gm15085Q62012 449 aa13.39□□□□□ -0.27
Shroom3-211ENSMUST00000225438 Foxi2Q3I5G5 311 aa13.38□□□□□ -0.27
Shroom3-211ENSMUST00000225438 Trbv13-1A0A0B4J1P8 112 aa13.38□□□□□ -0.27
Shroom3-211ENSMUST00000225438 Crybg1A0A0G2JG52 2065 aa13.38□□□□□ -0.27
Shroom3-211ENSMUST00000225438 Ighv2-7A0A075B5Q8 116 aa13.38□□□□□ -0.27
Shroom3-211ENSMUST00000225438 Ighv12-3A0A075B5T1 117 aa13.38□□□□□ -0.27
Shroom3-211ENSMUST00000225438 Trav4d-3A0A075B625 110 aa13.38□□□□□ -0.27
Shroom3-211ENSMUST00000225438 Trav12d-3A0A075B6A4 115 aa13.38□□□□□ -0.27
Shroom3-211ENSMUST00000225438 Sigmar1O55242 223 aa13.38□□□□□ -0.27
Shroom3-211ENSMUST00000225438 Camk2n2Q78WH7 79 aa13.38□□□□□ -0.27
Shroom3-211ENSMUST00000225438 Wfdc2Q9DAU7 174 aa13.38□□□□□ -0.27
Shroom3-211ENSMUST00000225438 Igkv3-5A0A140T8M6 119 aa13.38□□□□□ -0.27
Shroom3-211ENSMUST00000225438 Nsun4C4P6S0 806 aaKnown RBP13.38□□□□□ -0.27
Shroom3-211ENSMUST00000225438 E030018B13RikJ3QMS9 113 aa13.38□□□□□ -0.27
Shroom3-211ENSMUST00000225438 Wfdc15bQ9JHY4 80 aa13.38□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 54.7 ms