RNA–Protein interactions for RNA: ENSMUST00000209611.1

Sh3rf1-202, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

TSL 1 (best) BASIC

Gene Sh3rf1, Length 4,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-202ENSMUST00000209611 Chchd5Q9CQP3 110 aa7.33□□□□□ -1.24
Sh3rf1-202ENSMUST00000209611 Tmem160Q9D938 188 aa7.33□□□□□ -1.24
Sh3rf1-202ENSMUST00000209611 Usp24B1AY13 2617 aaKnown RBP7.33□□□□□ -1.24
Sh3rf1-202ENSMUST00000209611 Igkv20-101-2A0A0G2JDU3 113 aa7.32□□□□□ -1.24
Sh3rf1-202ENSMUST00000209611 Trbv17A0A140T8P8 114 aa7.32□□□□□ -1.24
Sh3rf1-202ENSMUST00000209611 Gm11733Q8BQP1 125 aa7.32□□□□□ -1.24
Sh3rf1-202ENSMUST00000209611 Itpr3P70227 2670 aa7.32□□□□□ -1.24
Sh3rf1-202ENSMUST00000209611 Ighv1-53A0A075B5W3 117 aa7.32□□□□□ -1.24
Sh3rf1-202ENSMUST00000209611 AW146154Q3TPQ7 468 aa7.32□□□□□ -1.24
Sh3rf1-202ENSMUST00000209611 Tcrg-C1A0A075B5Z0 172 aa7.32□□□□□ -1.24
Sh3rf1-202ENSMUST00000209611 KprpB2RUR4 657 aa7.32□□□□□ -1.24
Sh3rf1-202ENSMUST00000209611 Erdr1J3QMM0 206 aa7.32□□□□□ -1.24
Sh3rf1-202ENSMUST00000209611 Ighv1-62-3P01754 117 aa7.32□□□□□ -1.24
Sh3rf1-202ENSMUST00000209611 A130051J06RikQ8CAU1 227 aa7.32□□□□□ -1.24
Sh3rf1-202ENSMUST00000209611 Ighv14-1A0A075B5R4 117 aa7.32□□□□□ -1.24
Sh3rf1-202ENSMUST00000209611 Trav14d-1A0A075B6B1 121 aa7.32□□□□□ -1.24
Sh3rf1-202ENSMUST00000209611 Trav19A0A0B4J1K4 119 aa7.32□□□□□ -1.24
Sh3rf1-202ENSMUST00000209611 Tcf24V9GWT9 166 aa7.32□□□□□ -1.24
Sh3rf1-202ENSMUST00000209611 Igkv4-57-1A0A075B5M4 119 aa7.31□□□□□ -1.24
Sh3rf1-202ENSMUST00000209611 PolP10400 120 aa7.31□□□□□ -1.24
Sh3rf1-202ENSMUST00000209611 Trav7-2Q5R1I3 112 aa7.31□□□□□ -1.24
Sh3rf1-202ENSMUST00000209611 Pygo2Q80V76 405 aa7.31□□□□□ -1.24
Sh3rf1-202ENSMUST00000209611 Ash1lQ99MY8 2958 aa7.31□□□□□ -1.24
Sh3rf1-202ENSMUST00000209611 Atp5lQ9CPQ8 103 aa7.31□□□□□ -1.24
Sh3rf1-202ENSMUST00000209611 Gnb1lQ9EQ15 326 aa7.31□□□□□ -1.24
Sh3rf1-202ENSMUST00000209611 Adgrg4B7ZCC9 3073 aa7.31□□□□□ -1.24
Sh3rf1-202ENSMUST00000209611 Gm5089A1L3C8 106 aa7.31□□□□□ -1.24
Sh3rf1-202ENSMUST00000209611 Gm5878E9PUB3 99 aa7.31□□□□□ -1.24
Sh3rf1-202ENSMUST00000209611 Ighv1-9A0A0A6YW37 117 aa7.31□□□□□ -1.24
Sh3rf1-202ENSMUST00000209611 H2al2bA9Z055 111 aa7.31□□□□□ -1.24
Sh3rf1-202ENSMUST00000209611 MalO09198 153 aa7.31□□□□□ -1.24
Sh3rf1-202ENSMUST00000209611 Socs3O35718 225 aa7.31□□□□□ -1.24
Sh3rf1-202ENSMUST00000209611 Tmem170bP86050 132 aa7.31□□□□□ -1.24
Sh3rf1-202ENSMUST00000209611 Gm10188Q3V432 135 aa7.31□□□□□ -1.24
Sh3rf1-202ENSMUST00000209611 Nbeal1E9PYP2 2688 aa7.31□□□□□ -1.24
Sh3rf1-202ENSMUST00000209611 P01802 115 aa7.3□□□□□ -1.24
Sh3rf1-202ENSMUST00000209611 Znf239P24399 201 aa7.3□□□□□ -1.24
Sh3rf1-202ENSMUST00000209611 Ang5Q5GAN1 145 aa7.3□□□□□ -1.24
Sh3rf1-202ENSMUST00000209611 Il22ra1Q80XZ4 581 aa7.3□□□□□ -1.24
Sh3rf1-202ENSMUST00000209611 Defa27F2Z403 93 aa7.3□□□□□ -1.24
Sh3rf1-202ENSMUST00000209611 Defb2P82020 71 aa7.3□□□□□ -1.24
Sh3rf1-202ENSMUST00000209611 Pglyrp4Q0VB07 374 aa7.3□□□□□ -1.24
Sh3rf1-202ENSMUST00000209611 Rasl10aQ8K5A4 203 aa7.3□□□□□ -1.24
Sh3rf1-202ENSMUST00000209611 Shisa9Q9CZN4 424 aa7.3□□□□□ -1.24
Sh3rf1-202ENSMUST00000209611 Trav14-3A0A075B607 120 aa7.3□□□□□ -1.24
Sh3rf1-202ENSMUST00000209611 P01793 123 aa7.3□□□□□ -1.24
Sh3rf1-202ENSMUST00000209611 S100a4P07091 101 aa7.3□□□□□ -1.24
Sh3rf1-202ENSMUST00000209611 Snrpd3P62320 126 aaKnown RBP7.3□□□□□ -1.24
Sh3rf1-202ENSMUST00000209611 Brk1Q91VR8 75 aa7.3□□□□□ -1.24
Sh3rf1-202ENSMUST00000209611 Fmc1Q9CR13 113 aa7.3□□□□□ -1.24
Sh3rf1-202ENSMUST00000209611 Abca2P41234 2434 aa7.3□□□□□ -1.24
Sh3rf1-202ENSMUST00000209611 Ighv8-6A0A0A6YXA3 118 aa7.3□□□□□ -1.24
Sh3rf1-202ENSMUST00000209611 Mrpl53Q9D1H8 118 aaKnown RBP7.3□□□□□ -1.24
Sh3rf1-202ENSMUST00000209611 Hcfc2Q9D968 241 aa7.3□□□□□ -1.24
Sh3rf1-202ENSMUST00000209611 Dusp14Q9JLY7 198 aa7.3□□□□□ -1.24
Sh3rf1-202ENSMUST00000209611 Dkk2Q9QYZ8 259 aa7.3□□□□□ -1.24
Sh3rf1-202ENSMUST00000209611 DspE9Q557 2883 aaKnown RBP7.29□□□□□ -1.24
Sh3rf1-202ENSMUST00000209611 Bahcc1Q3UHR0 2643 aa7.29□□□□□ -1.24
Sh3rf1-202ENSMUST00000209611 Igkv4-59A0A0B4J1I8 117 aa7.29□□□□□ -1.24
Sh3rf1-202ENSMUST00000209611 Defb26Q30KN7 186 aa7.29□□□□□ -1.24
Sh3rf1-202ENSMUST00000209611 Gm9944Q8C559 102 aa7.29□□□□□ -1.24
Sh3rf1-202ENSMUST00000209611 Obox1Q9D350 204 aa7.29□□□□□ -1.24
Sh3rf1-202ENSMUST00000209611 Spata25Q9DA57 226 aa7.29□□□□□ -1.24
Sh3rf1-202ENSMUST00000209611 Svep1A2AVA0 3567 aa7.29□□□□□ -1.24
Sh3rf1-202ENSMUST00000209611 RetnQ99P87 114 aa7.29□□□□□ -1.24
Sh3rf1-202ENSMUST00000209611 Rabac1Q9Z0S9 185 aa7.29□□□□□ -1.24
Sh3rf1-202ENSMUST00000209611 Gm10553J3QPF1 123 aa7.29□□□□□ -1.24
Sh3rf1-202ENSMUST00000209611 Sec61gP60060 68 aa7.29□□□□□ -1.24
Sh3rf1-202ENSMUST00000209611 Runx1Q03347 451 aa7.29□□□□□ -1.24
Sh3rf1-202ENSMUST00000209611 RhohQ9D3G9 191 aa7.29□□□□□ -1.24
Sh3rf1-202ENSMUST00000209611 Igkv4-71A0A0G2JEH0 117 aa7.28□□□□□ -1.24
Sh3rf1-202ENSMUST00000209611 Cacng7P62956 275 aa7.28□□□□□ -1.24
Sh3rf1-202ENSMUST00000209611 Lgals4Q8K419 326 aa7.28□□□□□ -1.24
Sh3rf1-202ENSMUST00000209611 BB014433Q8C5R5 389 aa7.28□□□□□ -1.24
Sh3rf1-202ENSMUST00000209611 TtrP07309 147 aa7.28□□□□□ -1.24
Sh3rf1-202ENSMUST00000209611 Ighv1-52A0A0A6YXC3 117 aa7.28□□□□□ -1.24
Sh3rf1-202ENSMUST00000209611 Ang6Q5GAN0 147 aa7.28□□□□□ -1.24
Sh3rf1-202ENSMUST00000209611 Gpr82Q8BZR0 328 aa7.28□□□□□ -1.24
Sh3rf1-202ENSMUST00000209611 Usp9xP70398 2559 aaKnown RBP7.27□□□□□ -1.25
Sh3rf1-202ENSMUST00000209611 Ighv3-8A0A075B5T0 131 aa7.27□□□□□ -1.25
Sh3rf1-202ENSMUST00000209611 Fxyd7P59648 80 aa7.27□□□□□ -1.25
Sh3rf1-202ENSMUST00000209611 Gm11020F6ZGD5 61 aa7.27□□□□□ -1.25
Sh3rf1-202ENSMUST00000209611 P01727 129 aa7.27□□□□□ -1.25
Sh3rf1-202ENSMUST00000209611 Ankhd1E9PUR0 2548 aaKnown RBP7.27□□□□□ -1.25
Sh3rf1-202ENSMUST00000209611 Ighv1-64A0A075B5X3 117 aa7.27□□□□□ -1.25
Sh3rf1-202ENSMUST00000209611 Gm12845A0A0N4SUM5 588 aa7.27□□□□□ -1.25
Sh3rf1-202ENSMUST00000209611 Gm45717A0A1B0GT68 152 aa7.27□□□□□ -1.25
Sh3rf1-202ENSMUST00000209611 Klk1b4P00757 256 aa7.27□□□□□ -1.25
Sh3rf1-202ENSMUST00000209611 Thy1P01831 162 aa7.27□□□□□ -1.25
Sh3rf1-202ENSMUST00000209611 Ifitm10Q8BR26 201 aa7.27□□□□□ -1.25
Sh3rf1-202ENSMUST00000209611 CrxO54751 299 aa7.26□□□□□ -1.25
Sh3rf1-202ENSMUST00000209611 Ca1P13634 261 aa7.26□□□□□ -1.25
Sh3rf1-202ENSMUST00000209611 8030423J24RikQ9CX45 142 aa7.26□□□□□ -1.25
Sh3rf1-202ENSMUST00000209611 Mrpl32Q9DCI9 187 aaKnown RBP7.26□□□□□ -1.25
Sh3rf1-202ENSMUST00000209611 Ighv1-23A0A0A6YVW3 117 aa7.26□□□□□ -1.25
Sh3rf1-202ENSMUST00000209611 P01750 117 aa7.26□□□□□ -1.25
Sh3rf1-202ENSMUST00000209611 Prss58Q8BW11 241 aa7.26□□□□□ -1.25
Sh3rf1-202ENSMUST00000209611 Chac1Q8R3J5 223 aa7.26□□□□□ -1.25
Sh3rf1-202ENSMUST00000209611 Ube2e2Q91W82 201 aa7.26□□□□□ -1.25
Sh3rf1-202ENSMUST00000209611 Gm12888Q3UW77 119 aa7.26□□□□□ -1.25
Retrieved 100 of 22,080 RNA–protein pairs in 27.6 ms