RNA–Protein interactions for RNA: ENSMUST00000165165.2

Col6a5-201, Transcript of Collagen alpha-5(VI) chain, mousemouse

TSL 5 BASIC

Gene Col6a5, Length 8,046 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5-201ENSMUST00000165165 Gm9881Q8BR56 211 aa7.45□□□□□ -1.22
Col6a5-201ENSMUST00000165165 Gm20219A0A1B0GRQ3 87 aa7.45□□□□□ -1.22
Col6a5-201ENSMUST00000165165 P01794 123 aa7.45□□□□□ -1.22
Col6a5-201ENSMUST00000165165 Ighv1-36A0A0A6YXT2 117 aa7.45□□□□□ -1.22
Col6a5-201ENSMUST00000165165 Igkv4-86A0A0G2JGE7 114 aa7.45□□□□□ -1.22
Col6a5-201ENSMUST00000165165 Foxi2Q3I5G5 311 aa7.45□□□□□ -1.22
Col6a5-201ENSMUST00000165165 4930447F04RikA2AFR2 126 aa7.45□□□□□ -1.22
Col6a5-201ENSMUST00000165165 Prr15lQ8JZM2 100 aa7.45□□□□□ -1.22
Col6a5-201ENSMUST00000165165 Colca2F8VPY8 239 aa7.45□□□□□ -1.22
Col6a5-201ENSMUST00000165165 P06330 118 aa7.45□□□□□ -1.22
Col6a5-201ENSMUST00000165165 Igkv2-109A0A075B5K6 120 aa7.45□□□□□ -1.22
Col6a5-201ENSMUST00000165165 P0C1Z5 52 aa7.45□□□□□ -1.22
Col6a5-201ENSMUST00000165165 Klk9Q32M27 251 aa7.45□□□□□ -1.22
Col6a5-201ENSMUST00000165165 Mapk1ip1lQ8BH93 242 aa7.45□□□□□ -1.22
Col6a5-201ENSMUST00000165165 Gm10295Q8CCF3 114 aa7.45□□□□□ -1.22
Col6a5-201ENSMUST00000165165 Notch3Q61982 2318 aa7.45□□□□□ -1.22
Col6a5-201ENSMUST00000165165 Igkv8-21A0A140T8P7 120 aa7.44□□□□□ -1.22
Col6a5-201ENSMUST00000165165 Csrp2P97314 193 aaKnown RBP7.44□□□□□ -1.22
Col6a5-201ENSMUST00000165165 Ros1Q78DX7 2340 aa7.44□□□□□ -1.22
Col6a5-201ENSMUST00000165165 Gm20499D3Z4G5 72 aa7.44□□□□□ -1.22
Col6a5-201ENSMUST00000165165 Glrp1E9Q9S8 174 aa7.44□□□□□ -1.22
Col6a5-201ENSMUST00000165165 A0A1Y7VLU2 103 aa7.44□□□□□ -1.22
Col6a5-201ENSMUST00000165165 Klk12B2RVZ0 247 aa7.44□□□□□ -1.22
Col6a5-201ENSMUST00000165165 Atp5eP56382 52 aa7.44□□□□□ -1.22
Col6a5-201ENSMUST00000165165 Cox17P56394 63 aa7.44□□□□□ -1.22
Col6a5-201ENSMUST00000165165 Wfdc10Q3V2J9 124 aa7.44□□□□□ -1.22
Col6a5-201ENSMUST00000165165 Dpm3Q9D1Q4 92 aa7.44□□□□□ -1.22
Col6a5-201ENSMUST00000165165 Tmem14cQ9CQN6 114 aa7.44□□□□□ -1.22
Col6a5-201ENSMUST00000165165 Trav7-6A0A075B640 112 aa7.44□□□□□ -1.22
Col6a5-201ENSMUST00000165165 TprF6ZDS4 2431 aaKnown RBP7.43□□□□□ -1.22
Col6a5-201ENSMUST00000165165 Minos1Q7TNS2 76 aa7.43□□□□□ -1.22
Col6a5-201ENSMUST00000165165 Tm2d2Q8R0I4 213 aa7.43□□□□□ -1.22
Col6a5-201ENSMUST00000165165 NmbQ9CR53 121 aa7.43□□□□□ -1.22
Col6a5-201ENSMUST00000165165 LenepQ9WVB6 61 aa7.43□□□□□ -1.22
Col6a5-201ENSMUST00000165165 H2al1kJ3QP08 105 aa7.43□□□□□ -1.22
Col6a5-201ENSMUST00000165165 Atp5g3P56384 141 aa7.43□□□□□ -1.22
Col6a5-201ENSMUST00000165165 Ndufb4Q9CQC7 129 aa7.43□□□□□ -1.22
Col6a5-201ENSMUST00000165165 Atp5g1Q9CR84 136 aa7.43□□□□□ -1.22
Col6a5-201ENSMUST00000165165 Ighv8-12A0A0G2JDE1 119 aa7.43□□□□□ -1.22
Col6a5-201ENSMUST00000165165 Gm10518F6UQQ9 182 aa7.43□□□□□ -1.22
Col6a5-201ENSMUST00000165165 P01792 123 aa7.43□□□□□ -1.22
Col6a5-201ENSMUST00000165165 Vpreb1P13372 142 aa7.43□□□□□ -1.22
Col6a5-201ENSMUST00000165165 Gm10735Q3US96 136 aa7.43□□□□□ -1.22
Col6a5-201ENSMUST00000165165 Cdkn2aQ64364 169 aa7.43□□□□□ -1.22
Col6a5-201ENSMUST00000165165 PifoQ9D9W1 207 aa7.43□□□□□ -1.22
Col6a5-201ENSMUST00000165165 Pglyrp1O88593 182 aa7.43□□□□□ -1.22
Col6a5-201ENSMUST00000165165 P01657 111 aa7.43□□□□□ -1.22
Col6a5-201ENSMUST00000165165 Sptan1P16546 2472 aaKnown RBP7.43□□□□□ -1.22
Col6a5-201ENSMUST00000165165 Gm5129F6YHA9 99 aa7.42□□□□□ -1.22
Col6a5-201ENSMUST00000165165 Atp23Q9CWQ3 201 aa7.42□□□□□ -1.22
Col6a5-201ENSMUST00000165165 Iglv1A0A075B663 117 aa7.42□□□□□ -1.22
Col6a5-201ENSMUST00000165165 Igkv6-32A0A140T8N9 115 aa7.42□□□□□ -1.22
Col6a5-201ENSMUST00000165165 Ube2e1P52482 193 aa7.42□□□□□ -1.22
Col6a5-201ENSMUST00000165165 CrygcQ61597 174 aa7.42□□□□□ -1.22
Col6a5-201ENSMUST00000165165 Ighv8-8A0A0A6YXQ0 119 aa7.42□□□□□ -1.22
Col6a5-201ENSMUST00000165165 Gm17577J3QNF7 156 aa7.42□□□□□ -1.22
Col6a5-201ENSMUST00000165165 P01790 122 aa7.42□□□□□ -1.22
Col6a5-201ENSMUST00000165165 PrcdQ00LT2 53 aa7.42□□□□□ -1.22
Col6a5-201ENSMUST00000165165 Mlst8Q9DCJ1 326 aa7.42□□□□□ -1.22
Col6a5-201ENSMUST00000165165 Prok1Q14A28 105 aa7.42□□□□□ -1.22
Col6a5-201ENSMUST00000165165 Ighv3-1A0A075B5S6 116 aa7.42□□□□□ -1.22
Col6a5-201ENSMUST00000165165 Ypel3P61237 119 aa7.42□□□□□ -1.22
Col6a5-201ENSMUST00000165165 Zic4Q61467 341 aa7.42□□□□□ -1.22
Col6a5-201ENSMUST00000165165 Igkv1-35A0A0G2JDE5 120 aa7.41□□□□□ -1.22
Col6a5-201ENSMUST00000165165 P01793 123 aa7.41□□□□□ -1.22
Col6a5-201ENSMUST00000165165 Pnrc2Q9CR73 140 aa7.41□□□□□ -1.22
Col6a5-201ENSMUST00000165165 Gm6034E9Q101 117 aa7.41□□□□□ -1.22
Col6a5-201ENSMUST00000165165 Kiaa1549Q68FD9 1940 aa7.41□□□□□ -1.22
Col6a5-201ENSMUST00000165165 Gm43517E9PYS1 339 aa7.41□□□□□ -1.22
Col6a5-201ENSMUST00000165165 ColqO35348 457 aa7.41□□□□□ -1.22
Col6a5-201ENSMUST00000165165 Cela2aP05208 271 aa7.41□□□□□ -1.22
Col6a5-201ENSMUST00000165165 Sorl1O88307 2215 aaKnown RBP7.41□□□□□ -1.22
Col6a5-201ENSMUST00000165165 Ebi3O35228 228 aa7.41□□□□□ -1.22
Col6a5-201ENSMUST00000165165 P01791 123 aa7.41□□□□□ -1.22
Col6a5-201ENSMUST00000165165 Cd24P24807 76 aa7.41□□□□□ -1.22
Col6a5-201ENSMUST00000165165 Gm9936Q8C864 160 aa7.41□□□□□ -1.22
Col6a5-201ENSMUST00000165165 Col6a4A2AX52 2309 aa7.41□□□□□ -1.22
Col6a5-201ENSMUST00000165165 Zmat4Q8BZ94 229 aa7.41□□□□□ -1.22
Col6a5-201ENSMUST00000165165 Trav4-3A0A0B4J1K1 110 aa7.4□□□□□ -1.22
Col6a5-201ENSMUST00000165165 Tnfrsf26P83626 204 aa7.4□□□□□ -1.22
Col6a5-201ENSMUST00000165165 Trav6-6A0A075B603 114 aa7.4□□□□□ -1.22
Col6a5-201ENSMUST00000165165 Ighv3-4A0A0A6YXF1 117 aa7.4□□□□□ -1.22
Col6a5-201ENSMUST00000165165 P84750 121 aa7.4□□□□□ -1.22
Col6a5-201ENSMUST00000165165 Defb13Q8R2I4 64 aa7.4□□□□□ -1.22
Col6a5-201ENSMUST00000165165 Trav9d-3A0A075B695 113 aa7.4□□□□□ -1.22
Col6a5-201ENSMUST00000165165 Spag11Q8K4N2 71 aa7.4□□□□□ -1.22
Col6a5-201ENSMUST00000165165 Cryba4Q9JJV0 196 aa7.4□□□□□ -1.22
Col6a5-201ENSMUST00000165165 MgamB5THE2 1827 aa7.4□□□□□ -1.23
Col6a5-201ENSMUST00000165165 Lrp4Q8VI56 1905 aa7.4□□□□□ -1.23
Col6a5-201ENSMUST00000165165 Mrps12O35680 139 aa7.39□□□□□ -1.23
Col6a5-201ENSMUST00000165165 Tmem254aP0DN89 123 aa7.39□□□□□ -1.23
Col6a5-201ENSMUST00000165165 Tmem254bP0DN90 123 aa7.39□□□□□ -1.23
Col6a5-201ENSMUST00000165165 Tmem254cP0DN91 123 aa7.39□□□□□ -1.23
Col6a5-201ENSMUST00000165165 Gm11733Q8BQP1 125 aa7.39□□□□□ -1.23
Col6a5-201ENSMUST00000165165 AcacaQ5SWU9 2345 aa7.39□□□□□ -1.23
Col6a5-201ENSMUST00000165165 Cysrt1Q9D1E4 142 aa7.39□□□□□ -1.23
Col6a5-201ENSMUST00000165165 P01789 122 aa7.39□□□□□ -1.23
Col6a5-201ENSMUST00000165165 Zfp11P10751 647 aa7.39□□□□□ -1.23
Col6a5-201ENSMUST00000165165 Trav14-1A0A0G2JF94 121 aa7.39□□□□□ -1.23
Col6a5-201ENSMUST00000165165 Igkv3-12A0A140T8P0 119 aa7.39□□□□□ -1.23
Retrieved 100 of 22,080 RNA–protein pairs in 79.5 ms