RNA–Protein interactions for RNA: ENSMUST00000159405.2

Pcdh1-202, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 5 BASIC

Gene Pcdh1, Length 3,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-202ENSMUST00000159405 Higd1cQ76I25 96 aa9.56□□□□□ -0.88
Pcdh1-202ENSMUST00000159405 Gkn1Q9CR36 201 aa9.56□□□□□ -0.88
Pcdh1-202ENSMUST00000159405 Ighv8-5A0A0A6YY60 119 aa9.56□□□□□ -0.88
Pcdh1-202ENSMUST00000159405 Lypd1Q8BLC3 141 aa9.56□□□□□ -0.88
Pcdh1-202ENSMUST00000159405 C920008G01RikA0A0B4J1N1 112 aa9.56□□□□□ -0.88
Pcdh1-202ENSMUST00000159405 Ormdl2Q9CQZ0 153 aa9.56□□□□□ -0.88
Pcdh1-202ENSMUST00000159405 Ndufb3Q9CQZ6 104 aa9.56□□□□□ -0.88
Pcdh1-202ENSMUST00000159405 Fancd2osQ9D4K4 178 aa9.56□□□□□ -0.88
Pcdh1-202ENSMUST00000159405 P01630 113 aa9.56□□□□□ -0.88
Pcdh1-202ENSMUST00000159405 Tmem213Q08EA8 116 aa9.56□□□□□ -0.88
Pcdh1-202ENSMUST00000159405 Gm33815A0A087WNV3 176 aa9.55□□□□□ -0.88
Pcdh1-202ENSMUST00000159405 Foxi2Q3I5G5 311 aa9.55□□□□□ -0.88
Pcdh1-202ENSMUST00000159405 Ube2wQ8VDW4 151 aa9.55□□□□□ -0.88
Pcdh1-202ENSMUST00000159405 Prrc2cQ3TLH4 2846 aaKnown RBP9.55□□□□□ -0.88
Pcdh1-202ENSMUST00000159405 1700084M14RikB1AT01 78 aa9.55□□□□□ -0.88
Pcdh1-202ENSMUST00000159405 Ube2d3P61079 147 aa9.55□□□□□ -0.88
Pcdh1-202ENSMUST00000159405 Ube2d2P62838 147 aa9.55□□□□□ -0.88
Pcdh1-202ENSMUST00000159405 Trav7n-5A0A075B604 112 aa9.55□□□□□ -0.88
Pcdh1-202ENSMUST00000159405 Igkv19-93A0A0G2JFZ3 115 aa9.55□□□□□ -0.88
Pcdh1-202ENSMUST00000159405 Ins2P01326 110 aa9.55□□□□□ -0.88
Pcdh1-202ENSMUST00000159405 Atp5g3P56384 141 aa9.55□□□□□ -0.88
Pcdh1-202ENSMUST00000159405 Olfr553Q7TRS6 326 aa9.55□□□□□ -0.88
Pcdh1-202ENSMUST00000159405 Gm10295Q8CCF3 114 aa9.55□□□□□ -0.88
Pcdh1-202ENSMUST00000159405 Arhgap32Q811P8 2089 aa9.54□□□□□ -0.88
Pcdh1-202ENSMUST00000159405 Trav7-6A0A075B640 112 aa9.54□□□□□ -0.88
Pcdh1-202ENSMUST00000159405 Gm17660B9UIU9 90 aa9.54□□□□□ -0.88
Pcdh1-202ENSMUST00000159405 P01724 129 aa9.54□□□□□ -0.88
Pcdh1-202ENSMUST00000159405 P01727 129 aa9.54□□□□□ -0.88
Pcdh1-202ENSMUST00000159405 Ube2d1P61080 147 aaKnown RBP9.54□□□□□ -0.88
Pcdh1-202ENSMUST00000159405 Dmrt3Q80WT2 476 aa9.54□□□□□ -0.88
Pcdh1-202ENSMUST00000159405 Mrpl16Q99N93 251 aa9.54□□□□□ -0.88
Pcdh1-202ENSMUST00000159405 Snai3Q9QY31 287 aa9.54□□□□□ -0.88
Pcdh1-202ENSMUST00000159405 Ankrd11E9Q4F7 2643 aa9.53□□□□□ -0.88
Pcdh1-202ENSMUST00000159405 SrarpQ3ULG3 163 aa9.53□□□□□ -0.88
Pcdh1-202ENSMUST00000159405 Rasl11bQ922H7 247 aa9.53□□□□□ -0.88
Pcdh1-202ENSMUST00000159405 Zc2hc1bQ9D534 172 aa9.53□□□□□ -0.88
Pcdh1-202ENSMUST00000159405 Znf239P24399 201 aa9.53□□□□□ -0.88
Pcdh1-202ENSMUST00000159405 Sumo2P61957 95 aaKnown RBP9.53□□□□□ -0.88
Pcdh1-202ENSMUST00000159405 Crip2Q9DCT8 208 aaKnown RBP9.53□□□□□ -0.88
Pcdh1-202ENSMUST00000159405 Nbeal1E9PYP2 2688 aa9.53□□□□□ -0.88
Pcdh1-202ENSMUST00000159405 Gm16223Q8CBM3 117 aa9.53□□□□□ -0.88
Pcdh1-202ENSMUST00000159405 Rnf183Q8QZS5 190 aa9.53□□□□□ -0.88
Pcdh1-202ENSMUST00000159405 CstadQ9D245 104 aa9.53□□□□□ -0.88
Pcdh1-202ENSMUST00000159405 Arpc1aQ9R0Q6 370 aa9.53□□□□□ -0.88
Pcdh1-202ENSMUST00000159405 AdipoqQ60994 247 aa9.52□□□□□ -0.89
Pcdh1-202ENSMUST00000159405 Pde6hP61249 83 aa9.52□□□□□ -0.89
Pcdh1-202ENSMUST00000159405 Trav21-dv12A0A075B6C4 109 aa9.52□□□□□ -0.89
Pcdh1-202ENSMUST00000159405 Rpl32-psP17932 135 aa9.52□□□□□ -0.89
Pcdh1-202ENSMUST00000159405 Ighv3-6P18531 116 aa9.52□□□□□ -0.89
Pcdh1-202ENSMUST00000159405 Gm17455G3UW87 128 aa9.51□□□□□ -0.89
Pcdh1-202ENSMUST00000159405 Cdkn1aP39689 159 aa9.51□□□□□ -0.89
Pcdh1-202ENSMUST00000159405 Olfr313Q5NC55 308 aa9.51□□□□□ -0.89
Pcdh1-202ENSMUST00000159405 Cyyr1Q8VIH7 165 aa9.51□□□□□ -0.89
Pcdh1-202ENSMUST00000159405 Gm10135F6TEE5 83 aa9.51□□□□□ -0.89
Pcdh1-202ENSMUST00000159405 Atp5eP56382 52 aa9.51□□□□□ -0.89
Pcdh1-202ENSMUST00000159405 Tmem101Q91VP7 257 aa9.51□□□□□ -0.89
Pcdh1-202ENSMUST00000159405 Gm15128A2ADW8 449 aa9.51□□□□□ -0.89
Pcdh1-202ENSMUST00000159405 Gm15097E9QA14 449 aa9.51□□□□□ -0.89
Pcdh1-202ENSMUST00000159405 Wipf1Q8K1I7 493 aa9.51□□□□□ -0.89
Pcdh1-202ENSMUST00000159405 Trbv13-1A0A0B4J1P8 112 aa9.5□□□□□ -0.89
Pcdh1-202ENSMUST00000159405 Ighv1-69A0A0G2JFS5 117 aa9.5□□□□□ -0.89
Pcdh1-202ENSMUST00000159405 Sdhaf1Q3U276 118 aa9.5□□□□□ -0.89
Pcdh1-202ENSMUST00000159405 Cep192E9Q4Y4 2514 aaKnown RBP9.5□□□□□ -0.89
Pcdh1-202ENSMUST00000159405 Usp9yF8VPU6 2556 aa9.5□□□□□ -0.89
Pcdh1-202ENSMUST00000159405 Cxcl13O55038 109 aa9.5□□□□□ -0.89
Pcdh1-202ENSMUST00000159405 Gm10645Q3UPY1 145 aa9.5□□□□□ -0.89
Pcdh1-202ENSMUST00000159405 Ndufa4Q62425 82 aaKnown RBP9.5□□□□□ -0.89
Pcdh1-202ENSMUST00000159405 Prr3Q811B5 190 aaKnown RBP9.5□□□□□ -0.89
Pcdh1-202ENSMUST00000159405 Mrpl36Q99N90 102 aa9.5□□□□□ -0.89
Pcdh1-202ENSMUST00000159405 Igkv4-81A0A0G2JEY5 119 aa9.5□□□□□ -0.89
Pcdh1-202ENSMUST00000159405 Rnf5O35445 180 aa9.5□□□□□ -0.89
Pcdh1-202ENSMUST00000159405 Ss18l1Q8BW22 402 aa9.5□□□□□ -0.89
Pcdh1-202ENSMUST00000159405 Csdc2Q91YQ3 154 aa9.5□□□□□ -0.89
Pcdh1-202ENSMUST00000159405 Lypd8Q9D7S0 255 aa9.5□□□□□ -0.89
Pcdh1-202ENSMUST00000159405 Gm2174F6ZVF2 133 aa9.49□□□□□ -0.89
Pcdh1-202ENSMUST00000159405 Parm1Q923D3 296 aa9.49□□□□□ -0.89
Pcdh1-202ENSMUST00000159405 Mfap4Q9D1H9 257 aa9.49□□□□□ -0.89
Pcdh1-202ENSMUST00000159405 NrgnP60761 78 aa9.49□□□□□ -0.89
Pcdh1-202ENSMUST00000159405 Ndufa4l2Q4FZG9 87 aa9.49□□□□□ -0.89
Pcdh1-202ENSMUST00000159405 Ang5Q5GAN1 145 aa9.49□□□□□ -0.89
Pcdh1-202ENSMUST00000159405 Olfr311Q5NC59 308 aa9.49□□□□□ -0.89
Pcdh1-202ENSMUST00000159405 Q9D8Q6 235 aa9.49□□□□□ -0.89
Pcdh1-202ENSMUST00000159405 Slc25a15Q9WVD5 301 aa9.49□□□□□ -0.89
Pcdh1-202ENSMUST00000159405 P01812 117 aa9.49□□□□□ -0.89
Pcdh1-202ENSMUST00000159405 AvpP35455 168 aa9.49□□□□□ -0.89
Pcdh1-202ENSMUST00000159405 Prok1Q14A28 105 aa9.49□□□□□ -0.89
Pcdh1-202ENSMUST00000159405 Lect2O88803 151 aa9.48□□□□□ -0.89
Pcdh1-202ENSMUST00000159405 P04946 108 aa9.48□□□□□ -0.89
Pcdh1-202ENSMUST00000159405 Defb45Q3V490 66 aa9.48□□□□□ -0.89
Pcdh1-202ENSMUST00000159405 Morn5Q9DAI9 170 aa9.48□□□□□ -0.89
Pcdh1-202ENSMUST00000159405 Gm26661M0QWV4 156 aa9.48□□□□□ -0.89
Pcdh1-202ENSMUST00000159405 Tmem95P0DJF3 176 aa9.48□□□□□ -0.89
Pcdh1-202ENSMUST00000159405 Prss58Q8BW11 241 aa9.48□□□□□ -0.89
Pcdh1-202ENSMUST00000159405 Gm17727E9Q4V7 109 aa9.48□□□□□ -0.89
Pcdh1-202ENSMUST00000159405 Apoc4Q61268 124 aa9.48□□□□□ -0.89
Pcdh1-202ENSMUST00000159405 Fhl4Q8CDC8 279 aa9.48□□□□□ -0.89
Pcdh1-202ENSMUST00000159405 Igkv6-15A0A140T8M5 115 aa9.47□□□□□ -0.89
Pcdh1-202ENSMUST00000159405 P04944 107 aa9.47□□□□□ -0.89
Pcdh1-202ENSMUST00000159405 Cox6cQ9CPQ1 76 aa9.47□□□□□ -0.89
Pcdh1-202ENSMUST00000159405 Trav4n-4A0A075B615 110 aa9.47□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 65.2 ms