RNA–Protein interactions for RNA: ENSMUST00000116492.2

Ubp1-203, Transcript of Upstream-binding protein 1, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Ubp1, Length 2,111 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1-203ENSMUST00000116492 Srsf12Q8C8K3 266 aa17.97■□□□□ 0.47
Ubp1-203ENSMUST00000116492 OtogO55225 2910 aa17.97■□□□□ 0.47
Ubp1-203ENSMUST00000116492 Smim13E9Q942 88 aa17.96■□□□□ 0.47
Ubp1-203ENSMUST00000116492 P01794 123 aa17.96■□□□□ 0.47
Ubp1-203ENSMUST00000116492 Lrcol1Q3URS3 161 aa17.96■□□□□ 0.47
Ubp1-203ENSMUST00000116492 Klhdc1Q80YG3 406 aa17.96■□□□□ 0.47
Ubp1-203ENSMUST00000116492 Ccl21aP84444 133 aa17.96■□□□□ 0.47
Ubp1-203ENSMUST00000116492 Ccl21bP86792 133 aa17.96■□□□□ 0.47
Ubp1-203ENSMUST00000116492 Ccl21cP86793 133 aa17.96■□□□□ 0.47
Ubp1-203ENSMUST00000116492 Tmem88bQ3TYP4 173 aa17.96■□□□□ 0.47
Ubp1-203ENSMUST00000116492 Cyyr1Q8VIH7 165 aa17.96■□□□□ 0.47
Ubp1-203ENSMUST00000116492 Vps25Q9CQ80 176 aa17.96■□□□□ 0.47
Ubp1-203ENSMUST00000116492 Gm9913Q8BQQ2 135 aa17.95■□□□□ 0.46
Ubp1-203ENSMUST00000116492 SelenokQ9JLJ1 94 aa17.95■□□□□ 0.46
Ubp1-203ENSMUST00000116492 Abca2P41234 2434 aa17.95■□□□□ 0.46
Ubp1-203ENSMUST00000116492 Gm5464Q3UY29 175 aa17.95■□□□□ 0.46
Ubp1-203ENSMUST00000116492 Utp20Q5XG71 2788 aaKnown RBP17.94■□□□□ 0.46
Ubp1-203ENSMUST00000116492 Trbv17A0A140T8P8 114 aa17.94■□□□□ 0.46
Ubp1-203ENSMUST00000116492 Ube2e2Q91W82 201 aa17.94■□□□□ 0.46
Ubp1-203ENSMUST00000116492 PpdpfQ9CR37 115 aa17.93■□□□□ 0.46
Ubp1-203ENSMUST00000116492 1500011B03RikQ3TTH7 73 aa17.93■□□□□ 0.46
Ubp1-203ENSMUST00000116492 G0s2Q61585 103 aa17.93■□□□□ 0.46
Ubp1-203ENSMUST00000116492 Ovol2Q8CIV7 274 aa17.93■□□□□ 0.46
Ubp1-203ENSMUST00000116492 Znhit3Q9CQK1 151 aa17.93■□□□□ 0.46
Ubp1-203ENSMUST00000116492 Fam216aQ9DB54 251 aa17.93■□□□□ 0.46
Ubp1-203ENSMUST00000116492 Ighv2-3A0A075B696 115 aa17.92■□□□□ 0.46
Ubp1-203ENSMUST00000116492 Gm10271F6WY25 52 aa17.92■□□□□ 0.46
Ubp1-203ENSMUST00000116492 Rpl32P62911 135 aaKnown RBP17.92■□□□□ 0.46
Ubp1-203ENSMUST00000116492 Trbv16A0A0B4J1H3 115 aa17.92■□□□□ 0.46
Ubp1-203ENSMUST00000116492 Rpl36-ps4A0A140T8U4 117 aa17.92■□□□□ 0.46
Ubp1-203ENSMUST00000116492 Gm20499D3Z4G5 72 aa17.92■□□□□ 0.46
Ubp1-203ENSMUST00000116492 Emp2O88662 172 aa17.92■□□□□ 0.46
Ubp1-203ENSMUST00000116492 Gm5629P06327 117 aa17.92■□□□□ 0.46
Ubp1-203ENSMUST00000116492 Fam222aQ6PGH4 453 aa17.92■□□□□ 0.46
Ubp1-203ENSMUST00000116492 Spcs1Q9D958 161 aa17.92■□□□□ 0.46
Ubp1-203ENSMUST00000116492 Dynlrb2Q9DAJ5 96 aa17.92■□□□□ 0.46
Ubp1-203ENSMUST00000116492 Ighv2-7A0A075B5Q8 116 aa17.91■□□□□ 0.46
Ubp1-203ENSMUST00000116492 A730046J19RikA0A1B0GSN8 89 aa17.9■□□□□ 0.46
Ubp1-203ENSMUST00000116492 Fgf6P21658 208 aa17.9■□□□□ 0.46
Ubp1-203ENSMUST00000116492 Olfr313Q5NC55 308 aa17.9■□□□□ 0.46
Ubp1-203ENSMUST00000116492 Nbeal1E9PYP2 2688 aa17.9■□□□□ 0.46
Ubp1-203ENSMUST00000116492 Hbb-bsA8DUK4 147 aa17.9■□□□□ 0.46
Ubp1-203ENSMUST00000116492 Ndufa1O35683 70 aa17.9■□□□□ 0.46
Ubp1-203ENSMUST00000116492 Hbb-b1P02088 147 aa17.9■□□□□ 0.46
Ubp1-203ENSMUST00000116492 Prss29Q99MS4 279 aa17.9■□□□□ 0.46
Ubp1-203ENSMUST00000116492 Thy1P01831 162 aa17.89■□□□□ 0.45
Ubp1-203ENSMUST00000116492 Defa9P50707 93 aa17.89■□□□□ 0.45
Ubp1-203ENSMUST00000116492 Wfdc21Q8BTE6 63 aa17.89■□□□□ 0.45
Ubp1-203ENSMUST00000116492 4930564D02RikQ9D4S4 103 aa17.89■□□□□ 0.45
Ubp1-203ENSMUST00000116492 Gm5819E9PZ96 154 aa17.88■□□□□ 0.45
Ubp1-203ENSMUST00000116492 A930009A15RikG3UYI6 118 aa17.88■□□□□ 0.45
Ubp1-203ENSMUST00000116492 Rbx1P62878 108 aa17.88■□□□□ 0.45
Ubp1-203ENSMUST00000116492 Cdpf1Q8R3A2 119 aa17.87■□□□□ 0.45
Ubp1-203ENSMUST00000116492 Erg28Q9ERY9 140 aa17.87■□□□□ 0.45
Ubp1-203ENSMUST00000116492 Ighv5-9-1A0A0A6YVS4 126 aa17.87■□□□□ 0.45
Ubp1-203ENSMUST00000116492 Chd8Q09XV5 2582 aaKnown RBP17.86■□□□□ 0.45
Ubp1-203ENSMUST00000116492 Polr2kQ63871 58 aa17.86■□□□□ 0.45
Ubp1-203ENSMUST00000116492 PmvkQ9D1G2 192 aa17.86■□□□□ 0.45
Ubp1-203ENSMUST00000116492 Gm17732E9Q5I2 61 aa17.86■□□□□ 0.45
Ubp1-203ENSMUST00000116492 C1qcQ02105 246 aa17.86■□□□□ 0.45
Ubp1-203ENSMUST00000116492 Gphb5Q812B2 130 aa17.86■□□□□ 0.45
Ubp1-203ENSMUST00000116492 Egr2P08152 470 aa17.85■□□□□ 0.45
Ubp1-203ENSMUST00000116492 P18527 97 aa17.85■□□□□ 0.45
Ubp1-203ENSMUST00000116492 Ang3P97802 145 aa17.85■□□□□ 0.45
Ubp1-203ENSMUST00000116492 Gng7Q61016 68 aa17.85■□□□□ 0.45
Ubp1-203ENSMUST00000116492 Cd33Q63994 403 aa17.85■□□□□ 0.45
Ubp1-203ENSMUST00000116492 Sorl1O88307 2215 aaKnown RBP17.84■□□□□ 0.45
Ubp1-203ENSMUST00000116492 Trav9-2A0A075B647 113 aa17.84■□□□□ 0.45
Ubp1-203ENSMUST00000116492 Trav9-4A0A0B4J1K2 113 aa17.84■□□□□ 0.45
Ubp1-203ENSMUST00000116492 Gm45213A0A0U1RNZ6 101 aa17.84■□□□□ 0.45
Ubp1-203ENSMUST00000116492 Psmb8P28063 276 aa17.84■□□□□ 0.45
Ubp1-203ENSMUST00000116492 Snx22Q8C084 192 aa17.84■□□□□ 0.45
Ubp1-203ENSMUST00000116492 Clec5aQ9R007 190 aa17.83■□□□□ 0.45
Ubp1-203ENSMUST00000116492 Ptpn13Q64512 2453 aa17.83■□□□□ 0.44
Ubp1-203ENSMUST00000116492 Pglyrp1O88593 182 aa17.83■□□□□ 0.44
Ubp1-203ENSMUST00000116492 Tal2Q62282 108 aa17.83■□□□□ 0.44
Ubp1-203ENSMUST00000116492 Usp24B1AY13 2617 aaKnown RBP17.82■□□□□ 0.44
Ubp1-203ENSMUST00000116492 1810032O08RikE9PZV8 113 aa17.82■□□□□ 0.44
Ubp1-203ENSMUST00000116492 Fhl2O70433 279 aa17.81■□□□□ 0.44
Ubp1-203ENSMUST00000116492 Prr3Q811B5 190 aaKnown RBP17.81■□□□□ 0.44
Ubp1-203ENSMUST00000116492 Foxi1Q922I5 372 aa17.81■□□□□ 0.44
Ubp1-203ENSMUST00000116492 Abca12E9Q876 2595 aa17.81■□□□□ 0.44
Ubp1-203ENSMUST00000116492 Lyzl4Q9D925 145 aa17.81■□□□□ 0.44
Ubp1-203ENSMUST00000116492 Hoxd3P09027 433 aa17.8■□□□□ 0.44
Ubp1-203ENSMUST00000116492 Fxyd7P59648 80 aa17.8■□□□□ 0.44
Ubp1-203ENSMUST00000116492 AI854703Q8BIN3 203 aa17.8■□□□□ 0.44
Ubp1-203ENSMUST00000116492 Rs1Q9Z1L4 224 aa17.8■□□□□ 0.44
Ubp1-203ENSMUST00000116492 Tmem170bP86050 132 aa17.8■□□□□ 0.44
Ubp1-203ENSMUST00000116492 Mustn1Q99JI1 82 aa17.8■□□□□ 0.44
Ubp1-203ENSMUST00000116492 Trbv13-1A0A0B4J1P8 112 aa17.79■□□□□ 0.44
Ubp1-203ENSMUST00000116492 AamdcQ8R0P4 122 aa17.79■□□□□ 0.44
Ubp1-203ENSMUST00000116492 Bak1O08734 209 aa17.78■□□□□ 0.44
Ubp1-203ENSMUST00000116492 ColqO35348 457 aa17.78■□□□□ 0.44
Ubp1-203ENSMUST00000116492 P01837 106 aa17.77■□□□□ 0.44
Ubp1-203ENSMUST00000116492 BC025920Q3US60 128 aa17.77■□□□□ 0.44
Ubp1-203ENSMUST00000116492 FlncQ8VHX6 2726 aaKnown RBP17.77■□□□□ 0.43
Ubp1-203ENSMUST00000116492 Csn3P06796 181 aa17.77■□□□□ 0.43
Ubp1-203ENSMUST00000116492 Brd3osA0A1B0GRB6 84 aa17.76■□□□□ 0.43
Ubp1-203ENSMUST00000116492 Runx1Q03347 451 aa17.76■□□□□ 0.43
Ubp1-203ENSMUST00000116492 8030423J24RikQ9CX45 142 aa17.76■□□□□ 0.43
Retrieved 100 of 22,080 RNA–protein pairs in 51.7 ms