RNA–Protein interactions for RNA: ENSMUST00000088355.11

Col2a1-202, Transcript of Collagen alpha-1(II) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col2a1, Length 4,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1-202ENSMUST00000088355 Wdr90Q6ZPG2 1874 aa11.08□□□□□ -0.64
Col2a1-202ENSMUST00000088355 Defa2P28309 93 aa11.08□□□□□ -0.64
Col2a1-202ENSMUST00000088355 Foxi1Q922I5 372 aa11.08□□□□□ -0.64
Col2a1-202ENSMUST00000088355 Znhit3Q9CQK1 151 aa11.08□□□□□ -0.64
Col2a1-202ENSMUST00000088355 Trbv14A0A140T8L9 115 aa11.08□□□□□ -0.64
Col2a1-202ENSMUST00000088355 Mrps12O35680 139 aa11.08□□□□□ -0.64
Col2a1-202ENSMUST00000088355 Ighv1-77A0A0G2JGS9 117 aa11.07□□□□□ -0.64
Col2a1-202ENSMUST00000088355 MsmbO08540 113 aa11.07□□□□□ -0.64
Col2a1-202ENSMUST00000088355 Zfand3Q497H0 227 aa11.07□□□□□ -0.64
Col2a1-202ENSMUST00000088355 Ighv12-3A0A075B5T1 117 aa11.07□□□□□ -0.64
Col2a1-202ENSMUST00000088355 P04944 107 aa11.07□□□□□ -0.64
Col2a1-202ENSMUST00000088355 Lmo4P61969 165 aa11.07□□□□□ -0.64
Col2a1-202ENSMUST00000088355 Samd13D3YUG0 102 aa11.07□□□□□ -0.64
Col2a1-202ENSMUST00000088355 Ndufc2Q9CQ54 120 aa11.07□□□□□ -0.64
Col2a1-202ENSMUST00000088355 Ifitm1Q9D103 106 aa11.07□□□□□ -0.64
Col2a1-202ENSMUST00000088355 Ss18l2Q9D174 77 aa11.07□□□□□ -0.64
Col2a1-202ENSMUST00000088355 Reg3dQ9QUS9 175 aa11.07□□□□□ -0.64
Col2a1-202ENSMUST00000088355 HelzQ6DFV5 1964 aaKnown RBP11.07□□□□□ -0.64
Col2a1-202ENSMUST00000088355 Trav6-6A0A075B603 114 aa11.06□□□□□ -0.64
Col2a1-202ENSMUST00000088355 Gp9O88186 177 aa11.06□□□□□ -0.64
Col2a1-202ENSMUST00000088355 Dand5Q76LW6 185 aa11.06□□□□□ -0.64
Col2a1-202ENSMUST00000088355 SpinklQ8CEK3 90 aa11.06□□□□□ -0.64
Col2a1-202ENSMUST00000088355 Dmrtc1c1Q9D410 238 aa11.06□□□□□ -0.64
Col2a1-202ENSMUST00000088355 Pglyrp4Q0VB07 374 aa11.06□□□□□ -0.64
Col2a1-202ENSMUST00000088355 Golgb1E9PVZ8 3238 aa11.06□□□□□ -0.64
Col2a1-202ENSMUST00000088355 Igkv4-59A0A0B4J1I8 117 aa11.06□□□□□ -0.64
Col2a1-202ENSMUST00000088355 Defa16P50714 93 aa11.06□□□□□ -0.64
Col2a1-202ENSMUST00000088355 Klk11Q9QYN3 276 aa11.06□□□□□ -0.64
Col2a1-202ENSMUST00000088355 Trav14d-1A0A075B6B1 121 aa11.05□□□□□ -0.64
Col2a1-202ENSMUST00000088355 Smlr1J3QMJ4 66 aa11.05□□□□□ -0.64
Col2a1-202ENSMUST00000088355 Prp2P05143 317 aa11.05□□□□□ -0.64
Col2a1-202ENSMUST00000088355 Isg15Q64339 161 aaKnown RBP11.05□□□□□ -0.64
Col2a1-202ENSMUST00000088355 Gm9949Q8C9F4 104 aa11.05□□□□□ -0.64
Col2a1-202ENSMUST00000088355 Gemin7Q9CWY4 129 aa11.05□□□□□ -0.64
Col2a1-202ENSMUST00000088355 Trav9n-2A0A0G2JDP3 113 aa11.05□□□□□ -0.64
Col2a1-202ENSMUST00000088355 Igkv4-61A0A0G2JH00 117 aa11.05□□□□□ -0.64
Col2a1-202ENSMUST00000088355 MalO09198 153 aa11.05□□□□□ -0.64
Col2a1-202ENSMUST00000088355 Q99M08 65 aa11.05□□□□□ -0.64
Col2a1-202ENSMUST00000088355 Tm2d1Q99MB3 208 aa11.05□□□□□ -0.64
Col2a1-202ENSMUST00000088355 Lamtor3O88653 124 aa11.04□□□□□ -0.64
Col2a1-202ENSMUST00000088355 MdfiP70331 251 aa11.04□□□□□ -0.64
Col2a1-202ENSMUST00000088355 Znf740Q6NZQ6 180 aa11.04□□□□□ -0.64
Col2a1-202ENSMUST00000088355 BC048502Q80Y74 154 aa11.04□□□□□ -0.64
Col2a1-202ENSMUST00000088355 4930442H23RikQ9D5G7 103 aa11.04□□□□□ -0.64
Col2a1-202ENSMUST00000088355 Trav9d-3A0A075B695 113 aa11.04□□□□□ -0.64
Col2a1-202ENSMUST00000088355 Cited2O35740 269 aa11.04□□□□□ -0.64
Col2a1-202ENSMUST00000088355 Rnase1P00683 149 aa11.04□□□□□ -0.64
Col2a1-202ENSMUST00000088355 P01794 123 aa11.04□□□□□ -0.64
Col2a1-202ENSMUST00000088355 Ppp1r32Q148A4 427 aa11.04□□□□□ -0.64
Col2a1-202ENSMUST00000088355 LbhQ9CX60 105 aa11.04□□□□□ -0.64
Col2a1-202ENSMUST00000088355 Gm28269A0A087WSG3 125 aa11.04□□□□□ -0.64
Col2a1-202ENSMUST00000088355 Olfr311Q5NC59 308 aa11.04□□□□□ -0.64
Col2a1-202ENSMUST00000088355 Hist1h4aP62806 103 aaKnown RBP11.04□□□□□ -0.64
Col2a1-202ENSMUST00000088355 Igkv2-137A0A0B4J1H6 120 aa11.03□□□□□ -0.64
Col2a1-202ENSMUST00000088355 CrygbP04344 175 aa11.03□□□□□ -0.64
Col2a1-202ENSMUST00000088355 Pglyrp1O88593 182 aa11.03□□□□□ -0.64
Col2a1-202ENSMUST00000088355 LeprotO89013 131 aa11.03□□□□□ -0.64
Col2a1-202ENSMUST00000088355 P01753 117 aa11.03□□□□□ -0.64
Col2a1-202ENSMUST00000088355 Igll1P20764 209 aa11.03□□□□□ -0.64
Col2a1-202ENSMUST00000088355 Ighv13-2A0A0A6YWN3 119 aa11.02□□□□□ -0.64
Col2a1-202ENSMUST00000088355 Atp5g3P56384 141 aa11.02□□□□□ -0.64
Col2a1-202ENSMUST00000088355 Atp5g1Q9CR84 136 aa11.02□□□□□ -0.64
Col2a1-202ENSMUST00000088355 Piezo2Q8CD54 2822 aa11.02□□□□□ -0.64
Col2a1-202ENSMUST00000088355 Myo9aQ8C170 2542 aa11.02□□□□□ -0.64
Col2a1-202ENSMUST00000088355 Ube2v1Q9CZY3 147 aa11.02□□□□□ -0.65
Col2a1-202ENSMUST00000088355 Ptpn13Q64512 2453 aa11.02□□□□□ -0.65
Col2a1-202ENSMUST00000088355 Ighv8-8A0A0A6YXQ0 119 aa11.02□□□□□ -0.65
Col2a1-202ENSMUST00000088355 Ndufa1O35683 70 aa11.02□□□□□ -0.65
Col2a1-202ENSMUST00000088355 Ca1P13634 261 aa11.02□□□□□ -0.65
Col2a1-202ENSMUST00000088355 Olfr313Q5NC55 308 aa11.02□□□□□ -0.65
Col2a1-202ENSMUST00000088355 Lect2O88803 151 aa11.01□□□□□ -0.65
Col2a1-202ENSMUST00000088355 P01745 121 aa11.01□□□□□ -0.65
Col2a1-202ENSMUST00000088355 Morn3Q8C5T4 241 aa11.01□□□□□ -0.65
Col2a1-202ENSMUST00000088355 Ighv2-7A0A075B5Q8 116 aa11.01□□□□□ -0.65
Col2a1-202ENSMUST00000088355 Gm10638F6QEG2 257 aa11.01□□□□□ -0.65
Col2a1-202ENSMUST00000088355 Cyyr1Q8VIH7 165 aa11.01□□□□□ -0.65
Col2a1-202ENSMUST00000088355 MrapQ9D159 127 aa11.01□□□□□ -0.65
Col2a1-202ENSMUST00000088355 Odf1Q61999 247 aa11.01□□□□□ -0.65
Col2a1-202ENSMUST00000088355 Gm4861Q8C5A4 106 aa11.01□□□□□ -0.65
Col2a1-202ENSMUST00000088355 Vwc2lQ505H4 222 aa11□□□□□ -0.65
Col2a1-202ENSMUST00000088355 Notch4P31695 1964 aa11□□□□□ -0.65
Col2a1-202ENSMUST00000088355 Igkv4-72A0A0B4J1I4 117 aa11□□□□□ -0.65
Col2a1-202ENSMUST00000088355 Gm9958Q8C9U4 106 aa11□□□□□ -0.65
Col2a1-202ENSMUST00000088355 Gm15294V9GXA7 121 aa11□□□□□ -0.65
Col2a1-202ENSMUST00000088355 Trav9d-4A0A0G2JG37 103 aa11□□□□□ -0.65
Col2a1-202ENSMUST00000088355 Defa26Q3L180 93 aa11□□□□□ -0.65
Col2a1-202ENSMUST00000088355 Gm11733Q8BQP1 125 aa11□□□□□ -0.65
Col2a1-202ENSMUST00000088355 Ndufb4Q9CQC7 129 aa11□□□□□ -0.65
Col2a1-202ENSMUST00000088355 Tomm6Q9CQN3 74 aa10.99□□□□□ -0.65
Col2a1-202ENSMUST00000088355 Rpl32-psP17932 135 aa10.99□□□□□ -0.65
Col2a1-202ENSMUST00000088355 Defa7P50705 93 aa10.99□□□□□ -0.65
Col2a1-202ENSMUST00000088355 E130116L18RikQ8BMV6 101 aa10.99□□□□□ -0.65
Col2a1-202ENSMUST00000088355 Crip1P63254 77 aa10.99□□□□□ -0.65
Col2a1-202ENSMUST00000088355 Sprr3O09116 238 aa10.98□□□□□ -0.65
Col2a1-202ENSMUST00000088355 Wfdc15bQ9JHY4 80 aa10.98□□□□□ -0.65
Col2a1-202ENSMUST00000088355 PemtQ61907 199 aa10.98□□□□□ -0.65
Col2a1-202ENSMUST00000088355 Trav14d-3-dv8A0A075B619 120 aa10.98□□□□□ -0.65
Col2a1-202ENSMUST00000088355 P01748 117 aa10.98□□□□□ -0.65
Col2a1-202ENSMUST00000088355 Gatd1Q8BFQ8 220 aa10.98□□□□□ -0.65
Col2a1-202ENSMUST00000088355 Shisa9Q9CZN4 424 aa10.97□□□□□ -0.65
Retrieved 100 of 22,080 RNA–protein pairs in 62.6 ms