RNA–Protein interactions for RNA: ENSMUST00000034713.8

Ldlr-201, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-201ENSMUST00000034713 Ccl21cP86793 133 aa7.77□□□□□ -1.17
Ldlr-201ENSMUST00000034713 Klf13Q9JJZ6 289 aa7.77□□□□□ -1.17
Ldlr-201ENSMUST00000034713 Gp9O88186 177 aa7.77□□□□□ -1.17
Ldlr-201ENSMUST00000034713 Cela2aP05208 271 aa7.77□□□□□ -1.17
Ldlr-201ENSMUST00000034713 SetxA2AKX3 2646 aa7.77□□□□□ -1.17
Ldlr-201ENSMUST00000034713 Igkv4-71A0A0G2JEH0 117 aa7.77□□□□□ -1.17
Ldlr-201ENSMUST00000034713 Edn1P22387 202 aa7.77□□□□□ -1.17
Ldlr-201ENSMUST00000034713 Gm10604Q3V0X7 143 aa7.77□□□□□ -1.17
Ldlr-201ENSMUST00000034713 Defb26Q30KN7 186 aa7.76□□□□□ -1.17
Ldlr-201ENSMUST00000034713 SpinklQ8CEK3 90 aa7.76□□□□□ -1.17
Ldlr-201ENSMUST00000034713 Arid1bE9Q4N7 2244 aa7.76□□□□□ -1.17
Ldlr-201ENSMUST00000034713 IgipA0A1B0GR74 53 aa7.76□□□□□ -1.17
Ldlr-201ENSMUST00000034713 NpyP57774 97 aa7.76□□□□□ -1.17
Ldlr-201ENSMUST00000034713 Igkv4-81A0A0G2JEY5 119 aa7.76□□□□□ -1.17
Ldlr-201ENSMUST00000034713 Ighv1-77A0A0G2JGS9 117 aa7.76□□□□□ -1.17
Ldlr-201ENSMUST00000034713 Znf672Q99LH4 468 aa7.76□□□□□ -1.17
Ldlr-201ENSMUST00000034713 Gm5941Q497P9 117 aa7.75□□□□□ -1.17
Ldlr-201ENSMUST00000034713 CrygcQ61597 174 aa7.75□□□□□ -1.17
Ldlr-201ENSMUST00000034713 Cox6b1P56391 86 aaKnown RBP7.75□□□□□ -1.17
Ldlr-201ENSMUST00000034713 ApomQ9Z1R3 190 aa7.75□□□□□ -1.17
Ldlr-201ENSMUST00000034713 Gm3285A0A1W2P7U0 201 aa7.75□□□□□ -1.17
Ldlr-201ENSMUST00000034713 Obox8V9GWY9 217 aa7.75□□□□□ -1.17
Ldlr-201ENSMUST00000034713 Lrrk2Q5S006 2527 aa7.75□□□□□ -1.17
Ldlr-201ENSMUST00000034713 Tmem86bQ497J1 226 aa7.75□□□□□ -1.17
Ldlr-201ENSMUST00000034713 Gm9936Q8C864 160 aa7.75□□□□□ -1.17
Ldlr-201ENSMUST00000034713 Trav3-4A0A075B654 114 aa7.74□□□□□ -1.17
Ldlr-201ENSMUST00000034713 Zmat4Q8BZ94 229 aa7.74□□□□□ -1.17
Ldlr-201ENSMUST00000034713 Tnfrsf23Q9ER63 176 aa7.74□□□□□ -1.17
Ldlr-201ENSMUST00000034713 Ighv1-64A0A075B5X3 117 aa7.74□□□□□ -1.17
Ldlr-201ENSMUST00000034713 Ighv1-74A0A0G2JGK2 117 aa7.74□□□□□ -1.17
Ldlr-201ENSMUST00000034713 Cd24P24807 76 aa7.74□□□□□ -1.17
Ldlr-201ENSMUST00000034713 Usp9xP70398 2559 aaKnown RBP7.74□□□□□ -1.17
Ldlr-201ENSMUST00000034713 Ighv5-9-1A0A0A6YVS4 126 aa7.74□□□□□ -1.17
Ldlr-201ENSMUST00000034713 Atp6v0e2Q91XE7 81 aa7.74□□□□□ -1.17
Ldlr-201ENSMUST00000034713 Lage3Q9CR70 148 aa7.74□□□□□ -1.17
Ldlr-201ENSMUST00000034713 Ighv1-49A0A0A6YWX2 117 aa7.74□□□□□ -1.17
Ldlr-201ENSMUST00000034713 Trbv14A0A140T8L9 115 aa7.74□□□□□ -1.17
Ldlr-201ENSMUST00000034713 Gm15127B1AVZ5 449 aa7.74□□□□□ -1.17
Ldlr-201ENSMUST00000034713 Lect2O88803 151 aa7.74□□□□□ -1.17
Ldlr-201ENSMUST00000034713 LeprotO89013 131 aa7.74□□□□□ -1.17
Ldlr-201ENSMUST00000034713 Cox17P56394 63 aa7.74□□□□□ -1.17
Ldlr-201ENSMUST00000034713 Smim26Q3V460 107 aa7.73□□□□□ -1.17
Ldlr-201ENSMUST00000034713 Ss18l2Q9D174 77 aa7.73□□□□□ -1.17
Ldlr-201ENSMUST00000034713 Clec5aQ9R007 190 aa7.73□□□□□ -1.17
Ldlr-201ENSMUST00000034713 Gm26602M0QWA4 95 aa7.73□□□□□ -1.17
Ldlr-201ENSMUST00000034713 Socs3O35718 225 aa7.73□□□□□ -1.17
Ldlr-201ENSMUST00000034713 Sap30O88574 220 aa7.73□□□□□ -1.17
Ldlr-201ENSMUST00000034713 Zc2hc1aQ8BJH1 324 aa7.73□□□□□ -1.17
Ldlr-201ENSMUST00000034713 A530064D06RikQ8BNV8 229 aa7.73□□□□□ -1.17
Ldlr-201ENSMUST00000034713 Fam216aQ9DB54 251 aa7.73□□□□□ -1.17
Ldlr-201ENSMUST00000034713 Gm7075D3Z497 112 aa7.73□□□□□ -1.17
Ldlr-201ENSMUST00000034713 Olfr311Q5NC59 308 aa7.73□□□□□ -1.17
Ldlr-201ENSMUST00000034713 9130230L23RikQ8CC80 163 aa7.73□□□□□ -1.17
Ldlr-201ENSMUST00000034713 Tanc2A2A690 1994 aa7.72□□□□□ -1.17
Ldlr-201ENSMUST00000034713 Sfta2E9PXB6 77 aa7.72□□□□□ -1.17
Ldlr-201ENSMUST00000034713 Hist1h4aP62806 103 aaKnown RBP7.72□□□□□ -1.17
Ldlr-201ENSMUST00000034713 Trav4d-3A0A075B625 110 aa7.72□□□□□ -1.17
Ldlr-201ENSMUST00000034713 Prok1Q14A28 105 aa7.72□□□□□ -1.17
Ldlr-201ENSMUST00000034713 Iglc1A0A0G2JE99 106 aa7.71□□□□□ -1.17
Ldlr-201ENSMUST00000034713 P01843 105 aa7.71□□□□□ -1.17
Ldlr-201ENSMUST00000034713 Spink1P09036 80 aa7.71□□□□□ -1.17
Ldlr-201ENSMUST00000034713 Ang5Q5GAN1 145 aa7.71□□□□□ -1.17
Ldlr-201ENSMUST00000034713 Gm10295Q8CCF3 114 aa7.71□□□□□ -1.17
Ldlr-201ENSMUST00000034713 Cfap54Q8C6S9 3106 aa7.71□□□□□ -1.17
Ldlr-201ENSMUST00000034713 Cyyr1Q8VIH7 165 aa7.71□□□□□ -1.18
Ldlr-201ENSMUST00000034713 Ndufa3Q9CQ91 84 aa7.71□□□□□ -1.18
Ldlr-201ENSMUST00000034713 Ighv3-8A0A075B5T0 131 aa7.71□□□□□ -1.18
Ldlr-201ENSMUST00000034713 CtrlQ9ER05 264 aa7.71□□□□□ -1.18
Ldlr-201ENSMUST00000034713 Col27a1Q5QNQ9 1845 aa7.71□□□□□ -1.18
Ldlr-201ENSMUST00000034713 Ttc28Q80XJ3 2450 aa7.71□□□□□ -1.18
Ldlr-201ENSMUST00000034713 Gm15128A2ADW8 449 aa7.71□□□□□ -1.18
Ldlr-201ENSMUST00000034713 Gm15093A2BI72 449 aa7.71□□□□□ -1.18
Ldlr-201ENSMUST00000034713 Luzp4B1AV09 449 aa7.71□□□□□ -1.18
Ldlr-201ENSMUST00000034713 Gm15107B1B0X0 449 aa7.71□□□□□ -1.18
Ldlr-201ENSMUST00000034713 Gm15097E9QA14 449 aa7.71□□□□□ -1.18
Ldlr-201ENSMUST00000034713 Crip1P63254 77 aa7.71□□□□□ -1.18
Ldlr-201ENSMUST00000034713 Gm15085Q62012 449 aa7.71□□□□□ -1.18
Ldlr-201ENSMUST00000034713 Bub3Q9WVA3 326 aa7.71□□□□□ -1.18
Ldlr-201ENSMUST00000034713 Ighv1-50A0A075B5W1 117 aa7.7□□□□□ -1.18
Ldlr-201ENSMUST00000034713 Nbl1Q61477 178 aa7.7□□□□□ -1.18
Ldlr-201ENSMUST00000034713 Timm17aQ9Z0V8 171 aa7.7□□□□□ -1.18
Ldlr-201ENSMUST00000034713 Ighv3-1A0A075B5S6 116 aa7.7□□□□□ -1.18
Ldlr-201ENSMUST00000034713 P01659 112 aa7.7□□□□□ -1.18
Ldlr-201ENSMUST00000034713 P01748 117 aa7.7□□□□□ -1.18
Ldlr-201ENSMUST00000034713 BB014433Q8C5R5 389 aa7.7□□□□□ -1.18
Ldlr-201ENSMUST00000034713 Rnf183Q8QZS5 190 aa7.7□□□□□ -1.18
Ldlr-201ENSMUST00000034713 Tmem210Q9D2F0 147 aa7.7□□□□□ -1.18
Ldlr-201ENSMUST00000034713 Ighv1-4A0A075B5T4 117 aa7.7□□□□□ -1.18
Ldlr-201ENSMUST00000034713 Igkv4-70A0A0B4J1I5 116 aa7.7□□□□□ -1.18
Ldlr-201ENSMUST00000034713 Mrps12O35680 139 aa7.7□□□□□ -1.18
Ldlr-201ENSMUST00000034713 Ndufa1O35683 70 aa7.7□□□□□ -1.18
Ldlr-201ENSMUST00000034713 Lypd6Q8BPP5 171 aa7.7□□□□□ -1.18
Ldlr-201ENSMUST00000034713 NpbQ8K4P1 119 aa7.7□□□□□ -1.18
Ldlr-201ENSMUST00000034713 Cdpf1Q8R3A2 119 aa7.7□□□□□ -1.18
Ldlr-201ENSMUST00000034713 Morn5Q9DAI9 170 aa7.7□□□□□ -1.18
Ldlr-201ENSMUST00000034713 Gm9925F6T2U3 160 aa7.69□□□□□ -1.18
Ldlr-201ENSMUST00000034713 P01739 132 aa7.69□□□□□ -1.18
Ldlr-201ENSMUST00000034713 P01837 106 aa7.69□□□□□ -1.18
Ldlr-201ENSMUST00000034713 Gm17324Q8C6J8 137 aa7.69□□□□□ -1.18
Ldlr-201ENSMUST00000034713 Notch2O35516 2470 aa7.69□□□□□ -1.18
Retrieved 100 of 22,080 RNA–protein pairs in 35.1 ms