RNA–Protein interactions for RNA: ENSMUST00000020911.13

Sdc1-201, Transcript of Syndecan-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc1, Length 3,157 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1-201ENSMUST00000020911 P01756 117 aa8.88□□□□□ -0.99
Sdc1-201ENSMUST00000020911 P01757 117 aa8.88□□□□□ -0.99
Sdc1-201ENSMUST00000020911 Ube2wQ8VDW4 151 aa8.88□□□□□ -0.99
Sdc1-201ENSMUST00000020911 Rnf185Q91YT2 192 aa8.88□□□□□ -0.99
Sdc1-201ENSMUST00000020911 Ebi3O35228 228 aa8.88□□□□□ -0.99
Sdc1-201ENSMUST00000020911 P06330 118 aa8.88□□□□□ -0.99
Sdc1-201ENSMUST00000020911 ErhP84089 104 aa8.88□□□□□ -0.99
Sdc1-201ENSMUST00000020911 Lypd8Q9D7S0 255 aa8.88□□□□□ -0.99
Sdc1-201ENSMUST00000020911 Esm1Q9QYY7 184 aa8.88□□□□□ -0.99
Sdc1-201ENSMUST00000020911 Pkd1l2Q7TN88 2461 aa8.88□□□□□ -0.99
Sdc1-201ENSMUST00000020911 Zfyve26Q5DU37 2529 aa8.88□□□□□ -0.99
Sdc1-201ENSMUST00000020911 P01837 106 aa8.87□□□□□ -0.99
Sdc1-201ENSMUST00000020911 Rpl27aP14115 148 aaKnown RBP8.87□□□□□ -0.99
Sdc1-201ENSMUST00000020911 Smr3aQ61900 147 aa8.87□□□□□ -0.99
Sdc1-201ENSMUST00000020911 P04941 107 aa8.87□□□□□ -0.99
Sdc1-201ENSMUST00000020911 4930518I15RikQ3V2W7 57 aa8.87□□□□□ -0.99
Sdc1-201ENSMUST00000020911 Ighv5-6A0A075B5Q0 117 aa8.87□□□□□ -0.99
Sdc1-201ENSMUST00000020911 Gm21974F6W3F3 119 aa8.87□□□□□ -0.99
Sdc1-201ENSMUST00000020911 Pglyrp4Q0VB07 374 aa8.87□□□□□ -0.99
Sdc1-201ENSMUST00000020911 Wisp2Q9Z0G4 251 aa8.87□□□□□ -0.99
Sdc1-201ENSMUST00000020911 Trbv17A0A140T8P8 114 aa8.86□□□□□ -0.99
Sdc1-201ENSMUST00000020911 Q08AU9 97 aa8.86□□□□□ -0.99
Sdc1-201ENSMUST00000020911 P01729 129 aa8.86□□□□□ -0.99
Sdc1-201ENSMUST00000020911 SbsponQ3UPR9 264 aa8.86□□□□□ -0.99
Sdc1-201ENSMUST00000020911 Gm17334Q8C6U3 126 aa8.86□□□□□ -0.99
Sdc1-201ENSMUST00000020911 Sub1P11031 127 aaKnown RBP8.85□□□□□ -0.99
Sdc1-201ENSMUST00000020911 Gatd1Q8BFQ8 220 aa8.85□□□□□ -0.99
Sdc1-201ENSMUST00000020911 Q8R092 253 aa8.85□□□□□ -0.99
Sdc1-201ENSMUST00000020911 Tac4Q99N14 128 aa8.85□□□□□ -0.99
Sdc1-201ENSMUST00000020911 Tmem167aQ9CR64 72 aa8.85□□□□□ -0.99
Sdc1-201ENSMUST00000020911 Ighv4-1A0A075B5R5 116 aa8.85□□□□□ -0.99
Sdc1-201ENSMUST00000020911 C920008G01RikA0A0B4J1N1 112 aa8.85□□□□□ -0.99
Sdc1-201ENSMUST00000020911 Gm5093E9PZB3 174 aa8.85□□□□□ -0.99
Sdc1-201ENSMUST00000020911 Tex26Q0VB26 296 aa8.85□□□□□ -0.99
Sdc1-201ENSMUST00000020911 Morn3Q8C5T4 241 aa8.85□□□□□ -0.99
Sdc1-201ENSMUST00000020911 Gm10295Q8CCF3 114 aa8.85□□□□□ -0.99
Sdc1-201ENSMUST00000020911 Chchd5Q9CQP3 110 aa8.85□□□□□ -0.99
Sdc1-201ENSMUST00000020911 Stpg1Q9D2F5 341 aa8.85□□□□□ -0.99
Sdc1-201ENSMUST00000020911 Spry2Q9QXV8 315 aa8.85□□□□□ -0.99
Sdc1-201ENSMUST00000020911 Fam208bQ5DTT3 2382 aa8.84□□□□□ -0.99
Sdc1-201ENSMUST00000020911 Ighv1-20A0A0A6YX66 117 aa8.84□□□□□ -0.99
Sdc1-201ENSMUST00000020911 Gm12888Q3UW77 119 aa8.84□□□□□ -0.99
Sdc1-201ENSMUST00000020911 Plekhb2Q9QZC7 221 aa8.84□□□□□ -0.99
Sdc1-201ENSMUST00000020911 P01724 129 aa8.83□□□□□ -1
Sdc1-201ENSMUST00000020911 P01725 110 aa8.83□□□□□ -1
Sdc1-201ENSMUST00000020911 P18530 117 aa8.83□□□□□ -1
Sdc1-201ENSMUST00000020911 Olfr553Q7TRS6 326 aa8.83□□□□□ -1
Sdc1-201ENSMUST00000020911 Trbv30A0A0B4J1P1 111 aa8.83□□□□□ -1
Sdc1-201ENSMUST00000020911 Samd13D3YUG0 102 aa8.83□□□□□ -1
Sdc1-201ENSMUST00000020911 Egr2P08152 470 aa8.83□□□□□ -1
Sdc1-201ENSMUST00000020911 Psmg4P0C7N9 123 aa8.83□□□□□ -1
Sdc1-201ENSMUST00000020911 IappP12968 93 aa8.83□□□□□ -1
Sdc1-201ENSMUST00000020911 Gm10192Q3V0S1 108 aa8.83□□□□□ -1
Sdc1-201ENSMUST00000020911 Atp5lQ9CPQ8 103 aa8.83□□□□□ -1
Sdc1-201ENSMUST00000020911 Q9CQ90 155 aa8.83□□□□□ -1
Sdc1-201ENSMUST00000020911 Igkv2-137A0A0B4J1H6 120 aa8.83□□□□□ -1
Sdc1-201ENSMUST00000020911 P04944 107 aa8.83□□□□□ -1
Sdc1-201ENSMUST00000020911 Defb33Q30KN3 62 aa8.83□□□□□ -1
Sdc1-201ENSMUST00000020911 Shisa2Q8QZV2 295 aa8.83□□□□□ -1
Sdc1-201ENSMUST00000020911 Fmc1Q9CR13 113 aa8.83□□□□□ -1
Sdc1-201ENSMUST00000020911 Gm29423A0A087WRM1 55 aa8.82□□□□□ -1
Sdc1-201ENSMUST00000020911 Gm17455G3UW87 128 aa8.82□□□□□ -1
Sdc1-201ENSMUST00000020911 Ifitm10Q8BR26 201 aa8.82□□□□□ -1
Sdc1-201ENSMUST00000020911 Fam19a5Q91WE9 132 aa8.82□□□□□ -1
Sdc1-201ENSMUST00000020911 Ighv1-7A0A075B5T7 117 aa8.82□□□□□ -1
Sdc1-201ENSMUST00000020911 Gsx1P31315 261 aa8.82□□□□□ -1
Sdc1-201ENSMUST00000020911 Khdc1cQ4KL78 166 aa8.82□□□□□ -1
Sdc1-201ENSMUST00000020911 Q9D8Q6 235 aa8.82□□□□□ -1
Sdc1-201ENSMUST00000020911 Morn5Q9DAI9 170 aa8.82□□□□□ -1
Sdc1-201ENSMUST00000020911 Olfr312Q7TRZ9 308 aa8.81□□□□□ -1
Sdc1-201ENSMUST00000020911 Gm35549A0A0N4SUS7 141 aa8.81□□□□□ -1
Sdc1-201ENSMUST00000020911 Gm6793B2RXM2 351 aa8.81□□□□□ -1
Sdc1-201ENSMUST00000020911 Defa21Q8C1P2 93 aa8.81□□□□□ -1
Sdc1-201ENSMUST00000020911 BokO35425 213 aa8.81□□□□□ -1
Sdc1-201ENSMUST00000020911 Gata1P17679 413 aa8.81□□□□□ -1
Sdc1-201ENSMUST00000020911 Gm28374F6SG70 93 aa8.8□□□□□ -1
Sdc1-201ENSMUST00000020911 Cdkn1aP39689 159 aa8.8□□□□□ -1
Sdc1-201ENSMUST00000020911 Foxi2Q3I5G5 311 aa8.8□□□□□ -1
Sdc1-201ENSMUST00000020911 Ighv1-37A0A0A6YW32 117 aa8.8□□□□□ -1
Sdc1-201ENSMUST00000020911 Defa7P50705 93 aa8.8□□□□□ -1
Sdc1-201ENSMUST00000020911 Defa23Q5G866 93 aa8.8□□□□□ -1
Sdc1-201ENSMUST00000020911 Zfp248Q640N4 576 aa8.8□□□□□ -1
Sdc1-201ENSMUST00000020911 Ighv7-3A0A075B5R2 120 aa8.79□□□□□ -1
Sdc1-201ENSMUST00000020911 Gata4Q08369 441 aa8.79□□□□□ -1
Sdc1-201ENSMUST00000020911 P01811 117 aa8.79□□□□□ -1
Sdc1-201ENSMUST00000020911 B430305J03RikQ8BQQ8 176 aa8.79□□□□□ -1
Sdc1-201ENSMUST00000020911 Vmn1r62Q8R2C0 300 aa8.79□□□□□ -1
Sdc1-201ENSMUST00000020911 Phlda3Q9WV95 125 aa8.79□□□□□ -1
Sdc1-201ENSMUST00000020911 Gm9195A0A140LHT4 2805 aa8.79□□□□□ -1
Sdc1-201ENSMUST00000020911 Gm16223Q8CBM3 117 aa8.79□□□□□ -1
Sdc1-201ENSMUST00000020911 Cysrt1Q9D1E4 142 aa8.79□□□□□ -1
Sdc1-201ENSMUST00000020911 Snai3Q9QY31 287 aa8.78□□□□□ -1
Sdc1-201ENSMUST00000020911 Ovol1Q9WTJ2 267 aa8.78□□□□□ -1
Sdc1-201ENSMUST00000020911 Gm933J3QPC1 141 aa8.78□□□□□ -1
Sdc1-201ENSMUST00000020911 Mrps21P58059 87 aa8.78□□□□□ -1
Sdc1-201ENSMUST00000020911 Arhgap32Q811P8 2089 aa8.78□□□□□ -1
Sdc1-201ENSMUST00000020911 Ptpn13Q64512 2453 aa8.78□□□□□ -1
Sdc1-201ENSMUST00000020911 Vma21-psA0A140T8R2 101 aa8.77□□□□□ -1
Sdc1-201ENSMUST00000020911 4930447F04RikA2AFR2 126 aa8.77□□□□□ -1
Sdc1-201ENSMUST00000020911 Gm15217A2CG07 155 aa8.77□□□□□ -1
Retrieved 100 of 22,080 RNA–protein pairs in 49 ms