RNA–Protein interactions for RNA: YNL086W

SNN1, Transcript of Subunit of the BLOC-1 complex involved in endosomal maturation, yeastyeast

Gene SNN1, Length 309 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNN1YNL086W DOT6P40059 670 aaKnown RBP6.43□□□□□ -1.38
SNN1YNL086W SDS3P40505 327 aa6.43□□□□□ -1.38
SNN1YNL086W VPS25P47142 202 aa6.43□□□□□ -1.38
SNN1YNL086W SEC5P89102 971 aa6.43□□□□□ -1.38
SNN1YNL086W NHX1Q04121 633 aa6.43□□□□□ -1.38
SNN1YNL086W ADY4Q05955 493 aa6.43□□□□□ -1.38
SNN1YNL086W ATG33Q06485 197 aa6.43□□□□□ -1.38
SNN1YNL086W CDD1Q06549 142 aa6.43□□□□□ -1.38
SNN1YNL086W YOR378WQ08902 515 aa6.43□□□□□ -1.38
SNN1YNL086W GUP2Q08929 609 aa6.43□□□□□ -1.38
SNN1YNL086W YVC1Q12324 675 aa6.43□□□□□ -1.38
SNN1YNL086W AI3P03877 415 aa6.42□□□□□ -1.38
SNN1YNL086W SAM35P14693 329 aa6.42□□□□□ -1.38
SNN1YNL086W GBP2P25555 427 aaKnown RBP RIP-Chip data6.42□□□□□ -1.38not detected
SNN1YNL086W NAM7P30771 971 aaKnown RBP6.42□□□□□ -1.38
SNN1YNL086W RAD16P31244 790 aa6.42□□□□□ -1.38
SNN1YNL086W PRS1P32895 427 aaKnown RBP6.42□□□□□ -1.38
SNN1YNL086W OPY1P38271 328 aa6.42□□□□□ -1.38
SNN1YNL086W BTT1P40314 149 aaPredicted RBP6.42□□□□□ -1.38
SNN1YNL086W SPO22P40511 975 aa6.42□□□□□ -1.38
SNN1YNL086W MMM1P41800 426 aa6.42□□□□□ -1.38
SNN1YNL086W GZF3P42944 551 aaKnown RBP6.42□□□□□ -1.38
SNN1YNL086W DUG1P43616 481 aaKnown RBP6.42□□□□□ -1.38
SNN1YNL086W AIM14P53109 570 aa6.42□□□□□ -1.38
SNN1YNL086W NOG2P53742 486 aaKnown RBP6.42□□□□□ -1.38
SNN1YNL086W TOF1P53840 1238 aa6.42□□□□□ -1.38
SNN1YNL086W CBK1P53894 756 aa6.42□□□□□ -1.38
SNN1YNL086W YAT1P80235 687 aa6.42□□□□□ -1.38
SNN1YNL086W VMS1Q04311 632 aaKnown RBP6.42□□□□□ -1.38
SNN1YNL086W PRM6Q04705 352 aa6.42□□□□□ -1.38
SNN1YNL086W FUS2Q05670 677 aa6.42□□□□□ -1.38
SNN1YNL086W YOR059CQ08448 450 aaKnown RBP6.42□□□□□ -1.38
SNN1YNL086W TAF10Q12030 206 aa6.42□□□□□ -1.38
SNN1YNL086W TIP41Q12199 356 aa6.42□□□□□ -1.38
SNN1YNL086W LAA1P39526 2014 aa6.42□□□□□ -1.38
SNN1YNL086W MTF1P14908 341 aaKnown RBP6.41□□□□□ -1.38
SNN1YNL086W PFK1P16861 987 aaKnown RBP6.41□□□□□ -1.38
SNN1YNL086W RMD8P43620 662 aa6.41□□□□□ -1.38
SNN1YNL086W ALY2P47029 1046 aa6.41□□□□□ -1.38
SNN1YNL086W JSN1P47135 1091 aaKnown RBP RIP-Chip data6.41□□□□□ -1.38not detected
SNN1YNL086W WAR1Q03631 944 aa6.41□□□□□ -1.38
SNN1YNL086W BSP1Q06604 576 aa6.41□□□□□ -1.38
SNN1YNL086W RSC58Q07979 502 aa6.41□□□□□ -1.38
SNN1YNL086W SVS1Q12254 260 aa6.41□□□□□ -1.38
SNN1YNL086W MATALPHA2P0CY08 210 aa6.4□□□□□ -1.38
SNN1YNL086W HMLALPHA2P0CY09 210 aa6.4□□□□□ -1.38
SNN1YNL086W HMG1P12683 1054 aa6.4□□□□□ -1.38
SNN1YNL086W DAL7P21826 554 aa6.4□□□□□ -1.38
SNN1YNL086W AEP2P22136 580 aa6.4□□□□□ -1.38
SNN1YNL086W TRK2P28584 889 aa6.4□□□□□ -1.38
SNN1YNL086W PLC1P32383 869 aa6.4□□□□□ -1.38
SNN1YNL086W YSC83P32792 385 aa6.4□□□□□ -1.38
SNN1YNL086W YHR054CP38780 354 aa6.4□□□□□ -1.38
SNN1YNL086W OAF1P39720 1047 aaPredicted RBP6.4□□□□□ -1.38
SNN1YNL086W SBE2P42223 864 aaKnown RBP6.4□□□□□ -1.38
SNN1YNL086W ASN1P49089 572 aaKnown RBP6.4□□□□□ -1.38
SNN1YNL086W TAD1P53065 400 aa6.4□□□□□ -1.38
SNN1YNL086W NDJ1Q12366 352 aa6.4□□□□□ -1.38
SNN1YNL086W NBL1Q3E7Y6 73 aa6.4□□□□□ -1.38
SNN1YNL086W HSP82P02829 709 aaKnown RBP6.39□□□□□ -1.39
SNN1YNL086W YEL076C-AP0CX16 216 aa6.39□□□□□ -1.39
SNN1YNL086W YLR464WP0CX17 216 aa6.39□□□□□ -1.39
SNN1YNL086W ASP3-2P0CX77 362 aa6.39□□□□□ -1.39
SNN1YNL086W ASP3-3P0CX78 362 aa6.39□□□□□ -1.39
SNN1YNL086W ASP3-4P0CX79 362 aa6.39□□□□□ -1.39
SNN1YNL086W ASP3-1P0CZ17 362 aa6.39□□□□□ -1.39
SNN1YNL086W KAR1P11927 433 aa6.39□□□□□ -1.39
SNN1YNL086W HIR1P32479 840 aa6.39□□□□□ -1.39
SNN1YNL086W VPS24P36095 224 aaKnown RBP6.39□□□□□ -1.39
SNN1YNL086W YKR051WP36142 418 aa6.39□□□□□ -1.39
SNN1YNL086W YEL076CP39971 216 aa6.39□□□□□ -1.39
SNN1YNL086W RLP7P40693 322 aaKnown RBP6.39□□□□□ -1.39
SNN1YNL086W YGR153WP48238 217 aa6.39□□□□□ -1.39
SNN1YNL086W SHE10P53075 577 aa6.39□□□□□ -1.39
SNN1YNL086W ARI1P53111 347 aaKnown RBP6.39□□□□□ -1.39
SNN1YNL086W SDH1Q00711 640 aa6.39□□□□□ -1.39
SNN1YNL086W SMA1Q02651 245 aa6.39□□□□□ -1.39
SNN1YNL086W GCN5Q03330 439 aa6.39□□□□□ -1.39
SNN1YNL086W CEF1Q03654 590 aaPredicted RBP6.39□□□□□ -1.39
SNN1YNL086W YDL057WQ07379 328 aa6.39□□□□□ -1.39
SNN1YNL086W TFB1P32776 642 aa6.38□□□□□ -1.39
SNN1YNL086W UTH1P36135 365 aa6.38□□□□□ -1.39
SNN1YNL086W HSL7P38274 827 aa6.38□□□□□ -1.39
SNN1YNL086W TIF5P38431 405 aaKnown RBP6.38□□□□□ -1.39
SNN1YNL086W MNN11P46985 422 aaKnown RBP6.38□□□□□ -1.39
SNN1YNL086W HFM1P51979 1187 aa6.38□□□□□ -1.39
SNN1YNL086W NOP13P53883 403 aaKnown RBP RIP-Chip data6.38□□□□□ -1.39not detected
SNN1YNL086W SEG1Q04279 960 aa6.38□□□□□ -1.39
SNN1YNL086W EIS1Q05050 843 aaKnown RBP6.38□□□□□ -1.39
SNN1YNL086W HEL2Q05580 639 aaKnown RBP6.38□□□□□ -1.39
SNN1YNL086W TSR1Q07381 788 aaKnown RBP6.38□□□□□ -1.39
SNN1YNL086W GET3Q12154 354 aaKnown RBP6.38□□□□□ -1.39
SNN1YNL086W IRA1P18963 3092 aa6.37□□□□□ -1.39
SNN1YNL086W DIF1O13577 133 aa6.37□□□□□ -1.39
SNN1YNL086W DPB3P27344 201 aa6.37□□□□□ -1.39
SNN1YNL086W URA1P28272 314 aaPredicted RBP6.37□□□□□ -1.39
SNN1YNL086W MNN4P36044 1178 aa6.37□□□□□ -1.39
SNN1YNL086W SAP190P36123 1033 aa6.37□□□□□ -1.39
SNN1YNL086W AGP2P38090 596 aa6.37□□□□□ -1.39
SNN1YNL086W UBP13P38187 747 aa6.37□□□□□ -1.39
Retrieved 100 of 5,963 RNA–protein pairs in 16 ms