RNA–Protein interactions for RNA: YNL049C

SFB2, Transcript of Component of the Sec23p-Sfb2p heterodimer of the COPII vesicle coat, yeastyeast

Gene SFB2, Length 2,631 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFB2YNL049C SGO1Q08490 590 aa1.92□□□□□ -2.1
SFB2YNL049C HMI1Q12039 706 aa1.92□□□□□ -2.1
SFB2YNL049C CET1O13297 549 aaPredicted RBP1.91□□□□□ -2.1
SFB2YNL049C RPS17AP02407 136 aaKnown RBP1.91□□□□□ -2.1
SFB2YNL049C MAS2P11914 482 aa1.91□□□□□ -2.1
SFB2YNL049C RPS17BP14127 136 aaKnown RBP1.91□□□□□ -2.1
SFB2YNL049C EMC1P25574 760 aa1.91□□□□□ -2.1
SFB2YNL049C UBS1P38290 277 aa1.91□□□□□ -2.1
SFB2YNL049C PZF1P39933 429 aa1.91□□□□□ -2.1
SFB2YNL049C QRI7P43122 407 aa1.91□□□□□ -2.1
SFB2YNL049C CHA4P43634 648 aa1.91□□□□□ -2.1
SFB2YNL049C SET2P46995 733 aaKnown RBP1.91□□□□□ -2.1
SFB2YNL049C ORC4P54791 529 aa1.91□□□□□ -2.1
SFB2YNL049C NGL1Q08213 363 aaKnown RBP1.91□□□□□ -2.1
SFB2YNL049C APC5Q08683 685 aa1.91□□□□□ -2.1
SFB2YNL049C CWC2Q12046 339 aaPredicted RBP1.91□□□□□ -2.1
SFB2YNL049C PGK1P00560 416 aaKnown RBP1.91□□□□□ -2.1
SFB2YNL049C POL12P38121 705 aaPredicted RBP1.91□□□□□ -2.1
SFB2YNL049C REG2P38232 338 aa1.91□□□□□ -2.1
SFB2YNL049C EXO84P38261 753 aa1.91□□□□□ -2.1
SFB2YNL049C YHL026CP38740 315 aa1.91□□□□□ -2.1
SFB2YNL049C LAM1P38851 1228 aa1.91□□□□□ -2.1
SFB2YNL049C UME6P39001 836 aa1.91□□□□□ -2.1
SFB2YNL049C CCT3P39077 534 aaKnown RBP1.91□□□□□ -2.1
SFB2YNL049C MEF2P39677 819 aa1.91□□□□□ -2.1
SFB2YNL049C GID8P40208 455 aa1.91□□□□□ -2.1
SFB2YNL049C YIL092WP40497 633 aa1.91□□□□□ -2.1
SFB2YNL049C IES1P43579 692 aa1.91□□□□□ -2.1
SFB2YNL049C IRC5P43610 853 aa1.91□□□□□ -2.1
SFB2YNL049C ALT2P52892 507 aa1.91□□□□□ -2.1
SFB2YNL049C YGL242CP53066 181 aa1.91□□□□□ -2.1
SFB2YNL049C SHE10P53075 577 aa1.91□□□□□ -2.1
SFB2YNL049C PIB2P53191 635 aa1.91□□□□□ -2.1
SFB2YNL049C MOT3P54785 490 aaKnown RBP1.91□□□□□ -2.1
SFB2YNL049C RCR2Q03446 210 aaKnown RBP1.91□□□□□ -2.1
SFB2YNL049C MYO5Q04439 1219 aaKnown RBP1.91□□□□□ -2.1
SFB2YNL049C STP4Q07351 490 aa1.91□□□□□ -2.1
SFB2YNL049C DNL4Q08387 944 aaPredicted RBP1.91□□□□□ -2.1
SFB2YNL049C YOL114CQ12322 202 aa1.91□□□□□ -2.1
SFB2YNL049C LAA1P39526 2014 aa1.91□□□□□ -2.1
SFB2YNL049C YLR415CO13578 112 aa1.9□□□□□ -2.1
SFB2YNL049C TCP1P12612 559 aaKnown RBP1.9□□□□□ -2.1
SFB2YNL049C MTF1P14908 341 aaKnown RBP1.9□□□□□ -2.1
SFB2YNL049C TPM1P17536 199 aaKnown RBP1.9□□□□□ -2.1
SFB2YNL049C KGD2P19262 463 aaPredicted RBP1.9□□□□□ -2.1
SFB2YNL049C IME1P21190 360 aa1.9□□□□□ -2.1
SFB2YNL049C PGS1P25578 521 aa1.9□□□□□ -2.1
SFB2YNL049C DBF20P32328 564 aa1.9□□□□□ -2.1
SFB2YNL049C PUB1P32588 453 aaKnown RBP RIP-Chip data1.9□□□□□ -2.1not detected
SFB2YNL049C RAD24P32641 659 aa1.9□□□□□ -2.1
SFB2YNL049C RFS1P38234 210 aaKnown RBP1.9□□□□□ -2.1
SFB2YNL049C CRG1P38892 291 aaRIP-Chip data1.9□□□□□ -2.1not detected
SFB2YNL049C YNL195CP40168 261 aa1.9□□□□□ -2.1
SFB2YNL049C RPT2P40327 437 aaKnown RBP1.9□□□□□ -2.1
SFB2YNL049C PRP31P49704 494 aaPredicted RBP1.9□□□□□ -2.1
SFB2YNL049C MRPS35P53292 345 aa1.9□□□□□ -2.1
SFB2YNL049C ZPR1P53303 486 aaKnown RBP1.9□□□□□ -2.1
SFB2YNL049C SNO2P53823 222 aa1.9□□□□□ -2.1
SFB2YNL049C YMR210WQ03649 449 aa1.9□□□□□ -2.1
SFB2YNL049C YAP6Q03935 383 aa1.9□□□□□ -2.1
SFB2YNL049C BRE4Q07660 1125 aa1.9□□□□□ -2.1
SFB2YNL049C GPB1Q08886 897 aa1.9□□□□□ -2.1
SFB2YNL049C NUR1Q12066 484 aa1.9□□□□□ -2.1
SFB2YNL049C SNF1P06782 633 aaKnown RBP1.9□□□□□ -2.11
SFB2YNL049C PYC1P11154 1178 aaKnown RBP1.9□□□□□ -2.11
SFB2YNL049C STE4P18851 423 aa1.9□□□□□ -2.11
SFB2YNL049C HOP1P20050 605 aa1.9□□□□□ -2.11
SFB2YNL049C MF(ALPHA)2P32435 120 aa1.9□□□□□ -2.11
SFB2YNL049C ECM32P32644 1121 aaKnown RBP1.9□□□□□ -2.11
SFB2YNL049C MRS6P32864 603 aaKnown RBP1.9□□□□□ -2.11
SFB2YNL049C SIC1P38634 284 aa1.9□□□□□ -2.11
SFB2YNL049C DUN1P39009 513 aa1.9□□□□□ -2.11
SFB2YNL049C ERR3P42222 437 aa1.9□□□□□ -2.11
SFB2YNL049C TAF1P46677 1066 aa1.9□□□□□ -2.11
SFB2YNL049C ASK10P48361 1146 aa1.9□□□□□ -2.11
SFB2YNL049C EXG2P52911 562 aa1.9□□□□□ -2.11
SFB2YNL049C TAN1P53072 289 aaPredicted RBP1.9□□□□□ -2.11
SFB2YNL049C HOL1P53389 586 aa1.9□□□□□ -2.11
SFB2YNL049C NOP13P53883 403 aaKnown RBP RIP-Chip data1.9□□□□□ -2.11not detected
SFB2YNL049C YNL134CP53912 376 aaKnown RBP1.9□□□□□ -2.11
SFB2YNL049C ARG5,6Q01217 863 aa1.9□□□□□ -2.11
SFB2YNL049C RPS15Q01855 142 aaKnown RBP1.9□□□□□ -2.11
SFB2YNL049C MTD1Q02046 320 aaKnown RBP1.9□□□□□ -2.11
SFB2YNL049C YPL014WQ02606 381 aa1.9□□□□□ -2.11
SFB2YNL049C YDR132CQ03900 495 aa1.9□□□□□ -2.11
SFB2YNL049C VPS36Q06696 566 aa1.9□□□□□ -2.11
SFB2YNL049C PEX19Q07418 342 aa1.9□□□□□ -2.11
SFB2YNL049C VHS3Q08438 674 aa1.9□□□□□ -2.11
SFB2YNL049C DSE3Q08729 430 aa1.9□□□□□ -2.11
SFB2YNL049C YOR389WQ08912 624 aa1.9□□□□□ -2.11
SFB2YNL049C YPL278CQ08990 100 aa1.9□□□□□ -2.11
SFB2YNL049C SWM1Q12379 170 aa1.9□□□□□ -2.11
SFB2YNL049C NPC2Q12408 173 aa1.9□□□□□ -2.11
SFB2YNL049C PDH1Q12428 516 aaKnown RBP1.9□□□□□ -2.11
SFB2YNL049C KCS1Q12494 1050 aa1.9□□□□□ -2.11
SFB2YNL049C RIP1P08067 215 aa1.89□□□□□ -2.11
SFB2YNL049C CDC16P09798 840 aa1.89□□□□□ -2.11
SFB2YNL049C YEL076C-AP0CX16 216 aa1.89□□□□□ -2.11
SFB2YNL049C YLR464WP0CX17 216 aa1.89□□□□□ -2.11
SFB2YNL049C PHO3P24031 467 aa1.89□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms