RNA–Protein interactions for RNA: YMR304W

UBP15, Transcript of Ubiquitin-specific protease involved in protein deubiquitination, yeastyeast

Gene UBP15, Length 3,693 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP15YMR304W SUI1P32911 108 aaKnown RBP2.52□□□□□ -2.01
UBP15YMR304W JEN1P36035 616 aa2.52□□□□□ -2.01
UBP15YMR304W CCZ1P38273 704 aa2.52□□□□□ -2.01
UBP15YMR304W OCA5P38738 679 aa2.52□□□□□ -2.01
UBP15YMR304W AGX1P43567 385 aa2.52□□□□□ -2.01
UBP15YMR304W YJR079WP47126 109 aa2.52□□□□□ -2.01
UBP15YMR304W RRP46P53256 223 aaPredicted RBP2.52□□□□□ -2.01
UBP15YMR304W PAP2P53632 584 aaKnown RBP2.52□□□□□ -2.01
UBP15YMR304W YPL109CQ02981 657 aa2.52□□□□□ -2.01
UBP15YMR304W RAD33Q04231 177 aa2.52□□□□□ -2.01
UBP15YMR304W GTB1Q04924 702 aa2.52□□□□□ -2.01
UBP15YMR304W YDR278CQ05612 105 aa2.52□□□□□ -2.01
UBP15YMR304W MRL1Q06815 381 aa2.52□□□□□ -2.01
UBP15YMR304W YDL114WQ07530 308 aa2.52□□□□□ -2.01
UBP15YMR304W ESA1Q08649 445 aa2.52□□□□□ -2.01
UBP15YMR304W TMA16Q08687 178 aa2.52□□□□□ -2.01
UBP15YMR304W DDC1Q08949 612 aa2.52□□□□□ -2.01
UBP15YMR304W FLC1Q08967 793 aa2.52□□□□□ -2.01
UBP15YMR304W YOR097CQ12274 175 aaPredicted RBP2.52□□□□□ -2.01
UBP15YMR304W RRD2Q12461 358 aa2.52□□□□□ -2.01
UBP15YMR304W CHO2P05374 869 aaKnown RBP2.52□□□□□ -2.01
UBP15YMR304W URA4P20051 364 aa2.52□□□□□ -2.01
UBP15YMR304W GSY1P23337 708 aa2.52□□□□□ -2.01
UBP15YMR304W PPZ1P26570 692 aa2.52□□□□□ -2.01
UBP15YMR304W NAB2P32505 525 aaKnown RBP RIP-Chip data2.52□□□□□ -2.01not detected
UBP15YMR304W APM3P38153 483 aa2.52□□□□□ -2.01
UBP15YMR304W APM2P38700 605 aa2.52□□□□□ -2.01
UBP15YMR304W VMA22P38784 181 aa2.52□□□□□ -2.01
UBP15YMR304W RVS167P39743 482 aaKnown RBP2.52□□□□□ -2.01
UBP15YMR304W SCS2P40075 244 aaKnown RBP2.52□□□□□ -2.01
UBP15YMR304W SAP4P53036 818 aa2.52□□□□□ -2.01
UBP15YMR304W TIM11P81449 96 aaPredicted RBP2.52□□□□□ -2.01
UBP15YMR304W SSL2Q00578 843 aa2.52□□□□□ -2.01
UBP15YMR304W SDH1Q00711 640 aa2.52□□□□□ -2.01
UBP15YMR304W RPT6Q01939 405 aaKnown RBP2.52□□□□□ -2.01
UBP15YMR304W USA1Q03714 838 aa2.52□□□□□ -2.01
UBP15YMR304W ESF1Q06344 628 aaKnown RBP2.52□□□□□ -2.01
UBP15YMR304W PIN2Q12057 282 aa2.52□□□□□ -2.01
UBP15YMR304W YPR053CQ6Q5F3 151 aa2.52□□□□□ -2.01
UBP15YMR304W PRB1P09232 635 aa2.52□□□□□ -2.01
UBP15YMR304W CDC16P09798 840 aa2.52□□□□□ -2.01
UBP15YMR304W CDC24P11433 854 aaPredicted RBP2.52□□□□□ -2.01
UBP15YMR304W COQ1P18900 473 aa2.52□□□□□ -2.01
UBP15YMR304W APN1P22936 367 aa2.52□□□□□ -2.01
UBP15YMR304W CNB1P25296 175 aa2.52□□□□□ -2.01
UBP15YMR304W UBC6P33296 250 aaPredicted RBP2.52□□□□□ -2.01
UBP15YMR304W SEC66P33754 206 aa2.52□□□□□ -2.01
UBP15YMR304W MRPL40P36534 297 aa2.52□□□□□ -2.01
UBP15YMR304W UBX7P38349 436 aa2.52□□□□□ -2.01
UBP15YMR304W BOI2P39969 1040 aa2.52□□□□□ -2.01
UBP15YMR304W JLP2P40206 208 aa2.52□□□□□ -2.01
UBP15YMR304W RFC2P40348 353 aa2.52□□□□□ -2.01
UBP15YMR304W PHO86P46956 311 aa2.52□□□□□ -2.01
UBP15YMR304W MNN11P46985 422 aaKnown RBP2.52□□□□□ -2.01
UBP15YMR304W YNL144CP53907 740 aa2.52□□□□□ -2.01
UBP15YMR304W LAP3Q01532 483 aaKnown RBP RIP-Chip data2.52□□□□□ -2.01not detected
UBP15YMR304W YDR249CQ03787 373 aa2.52□□□□□ -2.01
UBP15YMR304W DLT1Q04216 342 aa2.52□□□□□ -2.01
UBP15YMR304W NNT1Q05874 261 aa2.52□□□□□ -2.01
UBP15YMR304W TDA6Q06466 467 aa2.52□□□□□ -2.01
UBP15YMR304W YDL124WQ07551 312 aaKnown RBP2.52□□□□□ -2.01
UBP15YMR304W GPM1P00950 247 aaKnown RBP2.51□□□□□ -2.01
UBP15YMR304W SCP160P06105 1222 aaKnown RBP RIP-Chip data2.51□□□□□ -2.01 RIP-Chip
UBP15YMR304W DMC1P25453 334 aa2.51□□□□□ -2.01
UBP15YMR304W RRT2P38332 387 aa2.51□□□□□ -2.01
UBP15YMR304W SSZ1P38788 538 aaKnown RBP2.51□□□□□ -2.01
UBP15YMR304W SAE2P46946 345 aa2.51□□□□□ -2.01
UBP15YMR304W YJL049WP47048 450 aa2.51□□□□□ -2.01
UBP15YMR304W GCV2P49095 1034 aa2.51□□□□□ -2.01
UBP15YMR304W CLU1Q03690 1277 aaKnown RBP2.51□□□□□ -2.01
UBP15YMR304W TAF12Q03761 539 aa2.51□□□□□ -2.01
UBP15YMR304W YLR257WQ06146 321 aaKnown RBP2.51□□□□□ -2.01
UBP15YMR304W RRP9Q06506 573 aaKnown RBP2.51□□□□□ -2.01
UBP15YMR304W GPI13Q07830 1017 aa2.51□□□□□ -2.01
UBP15YMR304W OSW1Q08692 278 aa2.51□□□□□ -2.01
UBP15YMR304W YBL113CQ7M4S9 792 aa2.51□□□□□ -2.01
UBP15YMR304W DFG16Q99234 619 aa2.51□□□□□ -2.01
UBP15YMR304W RPP1AP05318 106 aaPredicted RBP2.51□□□□□ -2.01
UBP15YMR304W RPS31P05759 152 aaKnown RBP2.51□□□□□ -2.01
UBP15YMR304W TPK2P06245 380 aa2.51□□□□□ -2.01
UBP15YMR304W MATALPHA1P0CY06 175 aa2.51□□□□□ -2.01
UBP15YMR304W HMLALPHA1P0CY07 175 aa2.51□□□□□ -2.01
UBP15YMR304W KSS1P14681 368 aa2.51□□□□□ -2.01
UBP15YMR304W PDC5P16467 563 aaKnown RBP2.51□□□□□ -2.01
UBP15YMR304W FUS3P16892 353 aaKnown RBP2.51□□□□□ -2.01
UBP15YMR304W VPS3P23643 1011 aa2.51□□□□□ -2.01
UBP15YMR304W PRP19P32523 503 aaKnown RBP2.51□□□□□ -2.01
UBP15YMR304W MRP4P32902 394 aa2.51□□□□□ -2.01
UBP15YMR304W RIB7P33312 244 aa2.51□□□□□ -2.01
UBP15YMR304W LST4P34239 828 aa2.51□□□□□ -2.01
UBP15YMR304W PHO11P35842 467 aa2.51□□□□□ -2.01
UBP15YMR304W UBP11P36026 717 aa2.51□□□□□ -2.01
UBP15YMR304W RSM22P36056 628 aa2.51□□□□□ -2.01
UBP15YMR304W HEL1P36113 551 aa2.51□□□□□ -2.01
UBP15YMR304W AGP2P38090 596 aa2.51□□□□□ -2.01
UBP15YMR304W BMT2P38278 337 aa2.51□□□□□ -2.01
UBP15YMR304W PHO12P38693 467 aa2.51□□□□□ -2.01
UBP15YMR304W NEM1P38757 446 aa2.51□□□□□ -2.01
UBP15YMR304W THO1P40040 218 aaKnown RBP2.51□□□□□ -2.01
UBP15YMR304W KHA1P40309 873 aa2.51□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms