RNA–Protein interactions for RNA: YMR247C

RKR1, Transcript of RING domain E3 ubiquitin ligase, yeastyeast

Gene RKR1, Length 4,689 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RKR1YMR247C BEM3P32873 1128 aa0.97□□□□□ -2.25
RKR1YMR247C MOT2P34909 587 aaKnown RBP0.97□□□□□ -2.25
RKR1YMR247C PCL5P38794 229 aa0.97□□□□□ -2.25
RKR1YMR247C DIM1P41819 318 aaKnown RBP0.97□□□□□ -2.25
RKR1YMR247C STB2P46679 850 aa0.97□□□□□ -2.25
RKR1YMR247C MPS3P47069 682 aa0.97□□□□□ -2.25
RKR1YMR247C SRB7P47822 140 aa0.97□□□□□ -2.25
RKR1YMR247C ALT2P52892 507 aa0.97□□□□□ -2.25
RKR1YMR247C YGR066CP53242 292 aa0.97□□□□□ -2.25
RKR1YMR247C NNF2P53253 936 aa0.97□□□□□ -2.25
RKR1YMR247C BTN2P53286 410 aa0.97□□□□□ -2.25
RKR1YMR247C SUB1P54000 292 aaKnown RBP0.97□□□□□ -2.25
RKR1YMR247C FCP1Q03254 732 aa0.97□□□□□ -2.25
RKR1YMR247C CAC2Q04199 468 aa0.97□□□□□ -2.25
RKR1YMR247C ARR3Q06598 404 aa0.97□□□□□ -2.25
RKR1YMR247C UBX5Q06682 500 aa0.97□□□□□ -2.25
RKR1YMR247C CDC45Q08032 650 aa0.97□□□□□ -2.25
RKR1YMR247C MLH3Q12083 715 aa0.97□□□□□ -2.25
RKR1YMR247C MED2Q12124 431 aa0.97□□□□□ -2.25
RKR1YMR247C GET3Q12154 354 aaKnown RBP0.97□□□□□ -2.25
RKR1YMR247C NOP58Q12499 511 aaKnown RBP0.97□□□□□ -2.25
RKR1YMR247C GUK1P15454 187 aaKnown RBP0.97□□□□□ -2.25
RKR1YMR247C PRI2P20457 528 aa0.97□□□□□ -2.25
RKR1YMR247C RPA135P22138 1203 aaKnown RBP0.97□□□□□ -2.25
RKR1YMR247C ARO2P28777 376 aaKnown RBP0.97□□□□□ -2.25
RKR1YMR247C PRE4P30657 266 aa0.97□□□□□ -2.25
RKR1YMR247C PRP19P32523 503 aaKnown RBP0.97□□□□□ -2.25
RKR1YMR247C SAC6P32599 642 aaKnown RBP0.97□□□□□ -2.25
RKR1YMR247C HOT13P36078 116 aa0.97□□□□□ -2.25
RKR1YMR247C YKL069WP36088 180 aa0.97□□□□□ -2.25
RKR1YMR247C VBA2P38358 474 aaKnown RBP0.97□□□□□ -2.25
RKR1YMR247C CBR1P38626 284 aaKnown RBP0.97□□□□□ -2.25
RKR1YMR247C ARN1P38731 627 aa0.97□□□□□ -2.25
RKR1YMR247C HRB1P38922 454 aaKnown RBP RIP-Chip data0.97□□□□□ -2.25not detected
RKR1YMR247C NPR2P39923 615 aa0.97□□□□□ -2.25
RKR1YMR247C IST3P40565 148 aaPredicted RBP0.97□□□□□ -2.25
RKR1YMR247C STB4P50104 949 aa0.97□□□□□ -2.25
RKR1YMR247C RPS15Q01855 142 aaKnown RBP0.97□□□□□ -2.25
RKR1YMR247C ECM9Q02202 377 aa0.97□□□□□ -2.25
RKR1YMR247C YDR338CQ05497 695 aa0.97□□□□□ -2.25
RKR1YMR247C RTP1Q12751 981 aa0.97□□□□□ -2.25
RKR1YMR247C TY1B-BRQ12193 1756 aa0.96□□□□□ -2.26
RKR1YMR247C ESP1Q03018 1630 aa0.96□□□□□ -2.26
RKR1YMR247C PIF1P07271 859 aa0.96□□□□□ -2.26
RKR1YMR247C SEC65P29478 273 aa0.96□□□□□ -2.26
RKR1YMR247C MRPL9P31334 269 aa0.96□□□□□ -2.26
RKR1YMR247C MGM1P32266 881 aa0.96□□□□□ -2.26
RKR1YMR247C IMP2'P32351 346 aa0.96□□□□□ -2.26
RKR1YMR247C TMT1P32643 299 aa0.96□□□□□ -2.26
RKR1YMR247C PHO11P35842 467 aa0.96□□□□□ -2.26
RKR1YMR247C HES1P35843 434 aa0.96□□□□□ -2.26
RKR1YMR247C VPS24P36095 224 aaKnown RBP0.96□□□□□ -2.26
RKR1YMR247C PHO12P38693 467 aa0.96□□□□□ -2.26
RKR1YMR247C YHR202WP38887 602 aa0.96□□□□□ -2.26
RKR1YMR247C UME6P39001 836 aa0.96□□□□□ -2.26
RKR1YMR247C BUD8P41698 603 aa0.96□□□□□ -2.26
RKR1YMR247C ALK1P43633 760 aaKnown RBP0.96□□□□□ -2.26
RKR1YMR247C NET1P47035 1189 aa0.96□□□□□ -2.26
RKR1YMR247C PAN2P53010 1115 aaPredicted RBP0.96□□□□□ -2.26
RKR1YMR247C CPR6P53691 371 aaKnown RBP0.96□□□□□ -2.26
RKR1YMR247C YAT1P80235 687 aa0.96□□□□□ -2.26
RKR1YMR247C EFR3Q03653 782 aaKnown RBP0.96□□□□□ -2.26
RKR1YMR247C ARG7Q04728 441 aa0.96□□□□□ -2.26
RKR1YMR247C YLR407WQ06070 228 aa0.96□□□□□ -2.26
RKR1YMR247C AIM6Q07716 390 aa0.96□□□□□ -2.26
RKR1YMR247C CEX1Q12453 761 aa0.96□□□□□ -2.26
RKR1YMR247C HRP1Q99383 534 aaKnown RBP0.96□□□□□ -2.26
RKR1YMR247C YPR089WO13585 888 aa0.96□□□□□ -2.26
RKR1YMR247C LEU2P04173 364 aaPredicted RBP0.96□□□□□ -2.26
RKR1YMR247C MTF2P10849 440 aa0.96□□□□□ -2.26
RKR1YMR247C HMG1P12683 1054 aa0.96□□□□□ -2.26
RKR1YMR247C PFK2P16862 959 aaKnown RBP RIP-Chip data0.96□□□□□ -2.26not detected
RKR1YMR247C COX11P19516 300 aaKnown RBP0.96□□□□□ -2.26
RKR1YMR247C PAP1P29468 568 aaKnown RBP0.96□□□□□ -2.26
RKR1YMR247C SAC1P32368 623 aaKnown RBP0.96□□□□□ -2.26
RKR1YMR247C TIM23P32897 222 aa0.96□□□□□ -2.26
RKR1YMR247C YKR051WP36142 418 aa0.96□□□□□ -2.26
RKR1YMR247C COS111P38308 924 aa0.96□□□□□ -2.26
RKR1YMR247C ACA1P39970 489 aa0.96□□□□□ -2.26
RKR1YMR247C NPP2P39997 493 aa0.96□□□□□ -2.26
RKR1YMR247C VFA1P40080 203 aa0.96□□□□□ -2.26
RKR1YMR247C CAB2P40506 365 aa0.96□□□□□ -2.26
RKR1YMR247C GPP1P41277 250 aaKnown RBP0.96□□□□□ -2.26
RKR1YMR247C IRC7P43623 340 aa0.96□□□□□ -2.26
RKR1YMR247C YJR008WP47085 338 aa0.96□□□□□ -2.26
RKR1YMR247C GND2P53319 492 aa0.96□□□□□ -2.26
RKR1YMR247C OGG1P53397 376 aaPredicted RBP0.96□□□□□ -2.26
RKR1YMR247C CSL4P53859 292 aaPredicted RBP0.96□□□□□ -2.26
RKR1YMR247C BOP3P53958 396 aa0.96□□□□□ -2.26
RKR1YMR247C SLU7Q02775 382 aaKnown RBP0.96□□□□□ -2.26
RKR1YMR247C MUB1Q03162 620 aa0.96□□□□□ -2.26
RKR1YMR247C YLR352WQ06479 807 aa0.96□□□□□ -2.26
RKR1YMR247C YCG1Q06680 1035 aa0.96□□□□□ -2.26
RKR1YMR247C POS5Q06892 414 aa0.96□□□□□ -2.26
RKR1YMR247C YEH2Q07950 538 aa0.96□□□□□ -2.26
RKR1YMR247C LEA1Q08963 238 aaPredicted RBP0.96□□□□□ -2.26
RKR1YMR247C SWT1Q12104 458 aa0.96□□□□□ -2.26
RKR1YMR247C BUG1Q12191 341 aa0.96□□□□□ -2.26
RKR1YMR247C PDR5P33302 1511 aaKnown RBP0.96□□□□□ -2.26
RKR1YMR247C TY1B-HO13535 1793 aa0.96□□□□□ -2.26
Retrieved 100 of 5,963 RNA–protein pairs in 68.1 ms