RNA–Protein interactions for RNA: YMR044W

IOC4, Transcript of Member of a complex (Isw1b) with Isw1p and Ioc2p, yeast

Gene IOC4, Length 1,428 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
IOC4	YMR044W	NOP9	P47077	666 aa	Known RBP	4.61	□□□□□ -1.67
IOC4	YMR044W	MRX6	P48564	524 aa		4.61	□□□□□ -1.67
IOC4	YMR044W	DSD1	P53095	428 aa		4.61	□□□□□ -1.67
IOC4	YMR044W	SPO1	P53541	631 aa		4.61	□□□□□ -1.67
IOC4	YMR044W	CIK1	Q01649	594 aa		4.61	□□□□□ -1.67
IOC4	YMR044W	YDR132C	Q03900	495 aa		4.61	□□□□□ -1.67
IOC4	YMR044W	RCO1	Q04779	684 aa		4.61	□□□□□ -1.67
IOC4	YMR044W	ADY4	Q05955	493 aa		4.61	□□□□□ -1.67
IOC4	YMR044W	ACK1	Q07622	623 aa	Predicted RBP	4.61	□□□□□ -1.67
IOC4	YMR044W	DIA2	Q08496	732 aa	Predicted RBP	4.61	□□□□□ -1.67
IOC4	YMR044W	PGC1	Q08959	321 aa		4.61	□□□□□ -1.67
IOC4	YMR044W	NUS1	Q12063	375 aa		4.61	□□□□□ -1.67
IOC4	YMR044W	HRP1	Q99383	534 aa	Known RBP	4.61	□□□□□ -1.67
IOC4	YMR044W	ATP2	P00830	511 aa	Known RBP	4.6	□□□□□ -1.67
IOC4	YMR044W	ILS1	P09436	1072 aa	Known RBP	4.6	□□□□□ -1.67
IOC4	YMR044W	PET122	P10355	254 aa		4.6	□□□□□ -1.67
IOC4	YMR044W	KAR4	P25583	335 aa		4.6	□□□□□ -1.67
IOC4	YMR044W	RPS7A	P26786	190 aa	Known RBP	4.6	□□□□□ -1.67
IOC4	YMR044W	MDL1	P33310	695 aa		4.6	□□□□□ -1.67
IOC4	YMR044W	POL12	P38121	705 aa	Predicted RBP	4.6	□□□□□ -1.67
IOC4	YMR044W	RFC1	P38630	861 aa	Known RBP	4.6	□□□□□ -1.67
IOC4	YMR044W	ECM1	P39715	212 aa		4.6	□□□□□ -1.67
IOC4	YMR044W	FLC2	P39719	783 aa		4.6	□□□□□ -1.67
IOC4	YMR044W	GET2	P40056	285 aa		4.6	□□□□□ -1.67
IOC4	YMR044W	SKP2	P42843	763 aa		4.6	□□□□□ -1.67
IOC4	YMR044W	REG1	Q00816	1014 aa		4.6	□□□□□ -1.67
IOC4	YMR044W	YPL108W	Q02872	168 aa	Predicted RBP	4.6	□□□□□ -1.67
IOC4	YMR044W	TRS31	Q03337	283 aa		4.6	□□□□□ -1.67
IOC4	YMR044W	YDR131C	Q03899	556 aa		4.6	□□□□□ -1.67
IOC4	YMR044W	RAD30	Q04049	632 aa		4.6	□□□□□ -1.67
IOC4	YMR044W	YLR224W	Q05947	369 aa		4.6	□□□□□ -1.67
IOC4	YMR044W	ENT4	Q07872	247 aa		4.6	□□□□□ -1.67
IOC4	YMR044W	NMD4	Q12129	218 aa		4.6	□□□□□ -1.67
IOC4	YMR044W	SUL2	Q12325	893 aa		4.6	□□□□□ -1.67
IOC4	YMR044W	POM34	Q12445	299 aa		4.6	□□□□□ -1.67
IOC4	YMR044W	ERG27	Q12452	347 aa	Known RBP	4.6	□□□□□ -1.67
IOC4	YMR044W	TRM11	Q12463	433 aa		4.6	□□□□□ -1.67
IOC4	YMR044W	NOP58	Q12499	511 aa	Known RBP	4.6	□□□□□ -1.67
IOC4	YMR044W	DFG16	Q99234	619 aa		4.6	□□□□□ -1.67
IOC4	YMR044W	TY2A-LR1	P0C2J4	438 aa		4.59	□□□□□ -1.67
IOC4	YMR044W	TY2A-F	P0CX61	438 aa		4.59	□□□□□ -1.67
IOC4	YMR044W	TY2A-GR2	P0CX62	438 aa		4.59	□□□□□ -1.67
IOC4	YMR044W	TY2A-C	P25383	438 aa		4.59	□□□□□ -1.67
IOC4	YMR044W	LIP5	P32875	414 aa		4.59	□□□□□ -1.67
IOC4	YMR044W	CDS1	P38221	457 aa		4.59	□□□□□ -1.67
IOC4	YMR044W	GDI1	P39958	451 aa	Known RBP	4.59	□□□□□ -1.67
IOC4	YMR044W	OGG1	P53397	376 aa	Predicted RBP	4.59	□□□□□ -1.67
IOC4	YMR044W	SSL2	Q00578	843 aa		4.59	□□□□□ -1.67
IOC4	YMR044W	TY2A-DR2	Q03483	438 aa		4.59	□□□□□ -1.67
IOC4	YMR044W	GAD1	Q04792	585 aa		4.59	□□□□□ -1.67
IOC4	YMR044W	RGC1	Q06108	1083 aa	Known RBP	4.59	□□□□□ -1.67
IOC4	YMR044W	SMF3	Q12078	473 aa	Predicted RBP	4.59	□□□□□ -1.67
IOC4	YMR044W	TY2A-B	Q12260	438 aa		4.59	□□□□□ -1.67
IOC4	YMR044W	TY2A-OR2	Q12293	438 aa		4.59	□□□□□ -1.67
IOC4	YMR044W	TY2A-DR1	Q12392	438 aa		4.59	□□□□□ -1.67
IOC4	YMR044W	TY2A-OR1	Q12439	438 aa		4.59	□□□□□ -1.67
IOC4	YMR044W	TY2A-DR3	Q99303	438 aa		4.59	□□□□□ -1.67
IOC4	YMR044W	STF1	P01098	86 aa		4.58	□□□□□ -1.68
IOC4	YMR044W	RPB2	P08518	1224 aa	Known RBP	4.58	□□□□□ -1.68
IOC4	YMR044W	CBS1	P14066	229 aa		4.58	□□□□□ -1.68
IOC4	YMR044W	CAD1	P24813	409 aa	Known RBP	4.58	□□□□□ -1.68
IOC4	YMR044W	STE50	P25344	346 aa		4.58	□□□□□ -1.68
IOC4	YMR044W	KTR3	P38130	404 aa	Predicted RBP	4.58	□□□□□ -1.68
IOC4	YMR044W	LYS9	P38999	446 aa		4.58	□□□□□ -1.68
IOC4	YMR044W	FTR1	P40088	404 aa		4.58	□□□□□ -1.68
IOC4	YMR044W	FKH2	P41813	862 aa		4.58	□□□□□ -1.68
IOC4	YMR044W	SPT20	P50875	604 aa		4.58	□□□□□ -1.68
IOC4	YMR044W	VPS4	P52917	437 aa		4.58	□□□□□ -1.68
IOC4	YMR044W	HOS2	P53096	452 aa	Predicted RBP	4.58	□□□□□ -1.68
IOC4	YMR044W	MTL1	P53214	551 aa		4.58	□□□□□ -1.68
IOC4	YMR044W	ART5	P53244	586 aa	Known RBP	4.58	□□□□□ -1.68
IOC4	YMR044W	NNF2	P53253	936 aa		4.58	□□□□□ -1.68
IOC4	YMR044W	CSL4	P53859	292 aa	Predicted RBP	4.58	□□□□□ -1.68
IOC4	YMR044W	ERG5	P54781	538 aa		4.58	□□□□□ -1.68
IOC4	YMR044W	CLU1	Q03690	1277 aa	Known RBP	4.58	□□□□□ -1.68
IOC4	YMR044W	AIM6	Q07716	390 aa		4.58	□□□□□ -1.68
IOC4	YMR044W	PAR32	Q12515	295 aa	Known RBP	4.58	□□□□□ -1.68
IOC4	YMR044W	ERG8	P24521	451 aa		4.57	□□□□□ -1.68
IOC4	YMR044W	ADK2	P26364	225 aa		4.57	□□□□□ -1.68
IOC4	YMR044W	GPI10	P30777	616 aa		4.57	□□□□□ -1.68
IOC4	YMR044W	EFT1	P32324	842 aa	Known RBP	4.57	□□□□□ -1.68
IOC4	YMR044W	STB5	P38699	743 aa		4.57	□□□□□ -1.68
IOC4	YMR044W	CRG1	P38892	291 aa	RIP-Chip data	4.57	□□□□□ -1.68	RIP-Chip
IOC4	YMR044W	RTS1	P38903	757 aa		4.57	□□□□□ -1.68
IOC4	YMR044W	PSD1	P39006	500 aa		4.57	□□□□□ -1.68
IOC4	YMR044W	MEP1	P40260	492 aa		4.57	□□□□□ -1.68
IOC4	YMR044W	LTP1	P40347	161 aa		4.57	□□□□□ -1.68
IOC4	YMR044W	SSU1	P41930	458 aa		4.57	□□□□□ -1.68
IOC4	YMR044W	YDL183C	P48569	320 aa		4.57	□□□□□ -1.68
IOC4	YMR044W	NGL3	Q03210	505 aa		4.57	□□□□□ -1.68
IOC4	YMR044W	YDR341C	Q05506	607 aa	Known RBP	4.57	□□□□□ -1.68
IOC4	YMR044W	VAM6	Q07468	1049 aa		4.57	□□□□□ -1.68
IOC4	YMR044W	TMA16	Q08687	178 aa		4.57	□□□□□ -1.68
IOC4	YMR044W	CIR2	Q08822	631 aa		4.57	□□□□□ -1.68
IOC4	YMR044W	GET3	Q12154	354 aa	Known RBP	4.57	□□□□□ -1.68
IOC4	YMR044W	LAS17	Q12446	633 aa		4.57	□□□□□ -1.68
IOC4	YMR044W	PWP1	P21304	576 aa	Known RBP	4.56	□□□□□ -1.68
IOC4	YMR044W	TRX1	P22217	103 aa	Known RBP	4.56	□□□□□ -1.68
IOC4	YMR044W	ALY1	P36117	915 aa		4.56	□□□□□ -1.68
IOC4	YMR044W	APE3	P37302	537 aa	Known RBP	4.56	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 146.2 ms