RNA–Protein interactions for RNA: YMR026C

PEX12, Transcript of C3HC4-type RING-finger peroxin and E3 ubiquitin ligase, yeastyeast

Gene PEX12, Length 1,200 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEX12YMR026C UBP16Q02863 499 aa5.86□□□□□ -1.47
PEX12YMR026C EIS1Q05050 843 aaKnown RBP5.86□□□□□ -1.47
PEX12YMR026C ICL2Q12031 575 aa5.86□□□□□ -1.47
PEX12YMR026C YER175W-AQ8TGU4 54 aa5.86□□□□□ -1.47
PEX12YMR026C POL3P15436 1097 aa5.85□□□□□ -1.47
PEX12YMR026C MCM3P24279 971 aaKnown RBP5.85□□□□□ -1.47
PEX12YMR026C VPS27P40343 622 aaKnown RBP5.85□□□□□ -1.47
PEX12YMR026C COG2P53271 262 aa5.85□□□□□ -1.47
PEX12YMR026C IWR1Q07532 353 aaPredicted RBP5.85□□□□□ -1.47
PEX12YMR026C PGK1P00560 416 aaKnown RBP5.84□□□□□ -1.47
PEX12YMR026C SEC18P18759 758 aaKnown RBP5.84□□□□□ -1.47
PEX12YMR026C KGD2P19262 463 aaPredicted RBP5.84□□□□□ -1.47
PEX12YMR026C NUP1P20676 1076 aa5.84□□□□□ -1.47
PEX12YMR026C GSY2P27472 705 aa5.84□□□□□ -1.47
PEX12YMR026C APD1P38281 316 aa5.84□□□□□ -1.47
PEX12YMR026C SPC72P39723 622 aa5.84□□□□□ -1.47
PEX12YMR026C CAB2P40506 365 aa5.84□□□□□ -1.47
PEX12YMR026C SAE2P46946 345 aa5.84□□□□□ -1.47
PEX12YMR026C PAP2P53632 584 aaKnown RBP5.84□□□□□ -1.47
PEX12YMR026C HRD3Q05787 833 aa5.84□□□□□ -1.47
PEX12YMR026C YDL242WQ07746 117 aa5.84□□□□□ -1.47
PEX12YMR026C LCB4Q12246 624 aa5.84□□□□□ -1.47
PEX12YMR026C Q0010Q9ZZX9 128 aa5.84□□□□□ -1.47
PEX12YMR026C APN1P22936 367 aa5.83□□□□□ -1.48
PEX12YMR026C CPR6P53691 371 aaKnown RBP5.83□□□□□ -1.48
PEX12YMR026C RIM13Q03792 727 aa5.83□□□□□ -1.48
PEX12YMR026C SEG1Q04279 960 aa5.83□□□□□ -1.48
PEX12YMR026C ADE3P07245 946 aaKnown RBP5.82□□□□□ -1.48
PEX12YMR026C MBR1P23493 339 aa5.82□□□□□ -1.48
PEX12YMR026C RIT1P23796 513 aa5.82□□□□□ -1.48
PEX12YMR026C RRP43P25359 394 aaPredicted RBP5.82□□□□□ -1.48
PEX12YMR026C BST1P43571 1029 aa5.82□□□□□ -1.48
PEX12YMR026C ARA2Q04212 335 aa5.82□□□□□ -1.48
PEX12YMR026C YML053CQ04978 212 aa5.82□□□□□ -1.48
PEX12YMR026C CYK3Q07533 885 aa5.82□□□□□ -1.48
PEX12YMR026C RDL1Q12305 139 aaKnown RBP5.82□□□□□ -1.48
PEX12YMR026C MIS1P09440 975 aaKnown RBP5.81□□□□□ -1.48
PEX12YMR026C MDM10P18409 493 aa5.81□□□□□ -1.48
PEX12YMR026C SWI4P25302 1093 aaKnown RBP5.81□□□□□ -1.48
PEX12YMR026C SAP1P39955 897 aaKnown RBP5.81□□□□□ -1.48
PEX12YMR026C ATP23P53722 227 aa5.81□□□□□ -1.48
PEX12YMR026C UBX4P54730 416 aa5.81□□□□□ -1.48
PEX12YMR026C YPL108WQ02872 168 aaPredicted RBP5.81□□□□□ -1.48
PEX12YMR026C ATG21Q02887 496 aa5.81□□□□□ -1.48
PEX12YMR026C SPN1Q06505 410 aaPredicted RBP5.81□□□□□ -1.48
PEX12YMR026C YBR255C-AQ3E776 120 aa5.81□□□□□ -1.48
PEX12YMR026C PHO81P17442 1178 aa5.8□□□□□ -1.48
PEX12YMR026C ACA1P39970 489 aa5.8□□□□□ -1.48
PEX12YMR026C TPM2P40414 161 aa5.8□□□□□ -1.48
PEX12YMR026C PLM2Q04383 521 aa5.8□□□□□ -1.48
PEX12YMR026C ORM2Q06144 216 aa5.8□□□□□ -1.48
PEX12YMR026C BSP1Q06604 576 aa5.8□□□□□ -1.48
PEX12YMR026C IRC3Q06683 689 aa5.8□□□□□ -1.48
PEX12YMR026C FRE7Q12333 620 aa5.8□□□□□ -1.48
PEX12YMR026C BIK1P11709 440 aa5.79□□□□□ -1.48
PEX12YMR026C PGI1P12709 554 aaKnown RBP5.79□□□□□ -1.48
PEX12YMR026C PDE1P22434 369 aa5.79□□□□□ -1.48
PEX12YMR026C CIR1P42940 261 aa5.79□□□□□ -1.48
PEX12YMR026C IMA1P53051 589 aa5.79□□□□□ -1.48
PEX12YMR026C BI2P03873 423 aa5.78□□□□□ -1.48
PEX12YMR026C ARP2P32381 391 aaKnown RBP5.78□□□□□ -1.48
PEX12YMR026C KES1P35844 434 aaKnown RBP5.78□□□□□ -1.48
PEX12YMR026C RPT2P40327 437 aaKnown RBP5.78□□□□□ -1.48
PEX12YMR026C YNL058CP53947 316 aa5.78□□□□□ -1.48
PEX12YMR026C SUL2Q12325 893 aa5.78□□□□□ -1.48
PEX12YMR026C YLR111WQ12528 110 aa5.78□□□□□ -1.48
PEX12YMR026C PNO1Q99216 274 aaKnown RBP5.78□□□□□ -1.48
PEX12YMR026C BEM3P32873 1128 aa5.77□□□□□ -1.49
PEX12YMR026C RPF2P36160 344 aaKnown RBP5.77□□□□□ -1.49
PEX12YMR026C YBR138CP38277 524 aa5.77□□□□□ -1.49
PEX12YMR026C PUG1P40100 303 aa5.77□□□□□ -1.49
PEX12YMR026C BPL1P48445 690 aaPredicted RBP5.77□□□□□ -1.49
PEX12YMR026C AAT1Q01802 451 aa5.77□□□□□ -1.49
PEX12YMR026C APA1P16550 321 aaKnown RBP5.76□□□□□ -1.49
PEX12YMR026C SWC3P31376 625 aa5.76□□□□□ -1.49
PEX12YMR026C SIP1P32578 815 aa5.76□□□□□ -1.49
PEX12YMR026C VBA2P38358 474 aaKnown RBP5.76□□□□□ -1.49
PEX12YMR026C ERC1P38767 581 aa5.76□□□□□ -1.49
PEX12YMR026C NMD5P46970 1048 aa5.76□□□□□ -1.49
PEX12YMR026C YPL191CQ08930 360 aa5.76□□□□□ -1.49
PEX12YMR026C RTC1Q08281 1341 aa5.75□□□□□ -1.49
PEX12YMR026C SES1P07284 462 aaKnown RBP5.75□□□□□ -1.49
PEX12YMR026C PET122P10355 254 aa5.75□□□□□ -1.49
PEX12YMR026C MSM1P22438 575 aa5.75□□□□□ -1.49
PEX12YMR026C MAK32P23060 363 aa5.75□□□□□ -1.49
PEX12YMR026C CLB4P24871 460 aa5.75□□□□□ -1.49
PEX12YMR026C FSH1P38777 243 aaKnown RBP5.75□□□□□ -1.49
PEX12YMR026C LTP1P40347 161 aa5.75□□□□□ -1.49
PEX12YMR026C XBP1P40489 647 aa5.75□□□□□ -1.49
PEX12YMR026C FAF1P40546 346 aaPredicted RBP5.75□□□□□ -1.49
PEX12YMR026C BNA3P47039 444 aaKnown RBP5.75□□□□□ -1.49
PEX12YMR026C RAD34Q06665 692 aa5.75□□□□□ -1.49
PEX12YMR026C URE2P23202 354 aaKnown RBP5.74□□□□□ -1.49
PEX12YMR026C URK1P27515 501 aa5.74□□□□□ -1.49
PEX12YMR026C IMD2P38697 523 aaKnown RBP5.74□□□□□ -1.49
PEX12YMR026C NPA3P47122 385 aa5.74□□□□□ -1.49
PEX12YMR026C IMD3P50095 523 aaKnown RBP5.74□□□□□ -1.49
PEX12YMR026C TAM41P53230 385 aa5.74□□□□□ -1.49
PEX12YMR026C YAT1P80235 687 aa5.74□□□□□ -1.49
PEX12YMR026C YPL071CQ02864 156 aa5.74□□□□□ -1.49
Retrieved 100 of 5,963 RNA–protein pairs in 28.6 ms