RNA–Protein interactions for RNA: YML107C

PML39, Transcript of Protein required for nuclear retention of unspliced pre-mRNAs, yeast

Gene PML39, Length 1,005 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PML39	YML107C	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	4.57	□□□□□ -1.68	not detected
PML39	YML107C	RIT1	P23796	513 aa		4.56	□□□□□ -1.68
PML39	YML107C	MCM3	P24279	971 aa	Known RBP	4.56	□□□□□ -1.68
PML39	YML107C	UBP16	Q02863	499 aa		4.56	□□□□□ -1.68
PML39	YML107C	AIM6	Q07716	390 aa		4.56	□□□□□ -1.68
PML39	YML107C	YNL162W-A	Q3E7A8	72 aa		4.56	□□□□□ -1.68
PML39	YML107C	BI2	P03873	423 aa		4.55	□□□□□ -1.68
PML39	YML107C	LEU2	P04173	364 aa	Predicted RBP	4.55	□□□□□ -1.68
PML39	YML107C	SIP1	P32578	815 aa		4.55	□□□□□ -1.68
PML39	YML107C	GDA1	P32621	518 aa		4.55	□□□□□ -1.68
PML39	YML107C	EXO1	P39875	702 aa		4.55	□□□□□ -1.68
PML39	YML107C	ESF2	P53743	316 aa	Known RBP	4.55	□□□□□ -1.68
PML39	YML107C	YPL108W	Q02872	168 aa	Predicted RBP	4.55	□□□□□ -1.68
PML39	YML107C	COQ11	Q05892	277 aa		4.55	□□□□□ -1.68
PML39	YML107C	OSW1	Q08692	278 aa		4.55	□□□□□ -1.68
PML39	YML107C	PCL8	Q08966	492 aa		4.55	□□□□□ -1.68
PML39	YML107C	ICL2	Q12031	575 aa		4.55	□□□□□ -1.68
PML39	YML107C	ADE3	P07245	946 aa	Known RBP	4.54	□□□□□ -1.68
PML39	YML107C	PGI1	P12709	554 aa	Known RBP	4.54	□□□□□ -1.68
PML39	YML107C	NUP1	P20676	1076 aa		4.54	□□□□□ -1.68
PML39	YML107C	HOT13	P36078	116 aa		4.54	□□□□□ -1.68
PML39	YML107C	APD1	P38281	316 aa		4.54	□□□□□ -1.68
PML39	YML107C	ARO9	P38840	513 aa	Predicted RBP	4.54	□□□□□ -1.68
PML39	YML107C	SKP2	P42843	763 aa		4.54	□□□□□ -1.68
PML39	YML107C	CPR6	P53691	371 aa	Known RBP	4.54	□□□□□ -1.68
PML39	YML107C	YML119W	Q03208	357 aa		4.54	□□□□□ -1.68
PML39	YML107C	ORM2	Q06144	216 aa		4.54	□□□□□ -1.68
PML39	YML107C	AQY1	P0CD91	305 aa		4.53	□□□□□ -1.68
PML39	YML107C	PDE1	P22434	369 aa		4.53	□□□□□ -1.68
PML39	YML107C	CLB4	P24871	460 aa		4.53	□□□□□ -1.68
PML39	YML107C	GCD7	P32502	381 aa	Predicted RBP	4.53	□□□□□ -1.68
PML39	YML107C	FRD1	P32614	470 aa	Known RBP	4.53	□□□□□ -1.68
PML39	YML107C	PTH2	P34222	208 aa		4.53	□□□□□ -1.68
PML39	YML107C	MRPL36	P36531	177 aa		4.53	□□□□□ -1.68
PML39	YML107C	SPC72	P39723	622 aa		4.53	□□□□□ -1.68
PML39	YML107C	ACA1	P39970	489 aa		4.53	□□□□□ -1.68
PML39	YML107C	TDA10	P42938	290 aa		4.53	□□□□□ -1.68
PML39	YML107C	YNL092W	P53934	400 aa		4.53	□□□□□ -1.68
PML39	YML107C	VMS1	Q04311	632 aa	Known RBP	4.53	□□□□□ -1.68
PML39	YML107C	YML053C	Q04978	212 aa		4.53	□□□□□ -1.68
PML39	YML107C	IRC3	Q06683	689 aa		4.53	□□□□□ -1.68
PML39	YML107C	YDL242W	Q07746	117 aa		4.53	□□□□□ -1.68
PML39	YML107C	CHO2	P05374	869 aa	Known RBP	4.52	□□□□□ -1.69
PML39	YML107C	AMD2	P22580	549 aa		4.52	□□□□□ -1.69
PML39	YML107C	SWI4	P25302	1093 aa	Known RBP	4.52	□□□□□ -1.69
PML39	YML107C	RPF2	P36160	344 aa	Known RBP	4.52	□□□□□ -1.69
PML39	YML107C	ATP23	P53722	227 aa		4.52	□□□□□ -1.69
PML39	YML107C	YNL058C	P53947	316 aa		4.52	□□□□□ -1.69
PML39	YML107C	RAD33	Q04231	177 aa		4.52	□□□□□ -1.69
PML39	YML107C	PLM2	Q04383	521 aa		4.52	□□□□□ -1.69
PML39	YML107C	EIS1	Q05050	843 aa	Known RBP	4.52	□□□□□ -1.69
PML39	YML107C	THI7	Q05998	598 aa		4.52	□□□□□ -1.69
PML39	YML107C	PET122	P10355	254 aa		4.51	□□□□□ -1.69
PML39	YML107C	MSM1	P22438	575 aa		4.51	□□□□□ -1.69
PML39	YML107C	RAD26	P40352	1085 aa		4.51	□□□□□ -1.69
PML39	YML107C	CIR1	P42940	261 aa		4.51	□□□□□ -1.69
PML39	YML107C	APA1	P16550	321 aa	Known RBP	4.5	□□□□□ -1.69
PML39	YML107C	KGD2	P19262	463 aa	Predicted RBP	4.5	□□□□□ -1.69
PML39	YML107C	ARP2	P32381	391 aa	Known RBP	4.5	□□□□□ -1.69
PML39	YML107C	MRS6	P32864	603 aa	Known RBP	4.5	□□□□□ -1.69
PML39	YML107C	FUN12	P39730	1002 aa	Known RBP	4.5	□□□□□ -1.69
PML39	YML107C	SAP1	P39955	897 aa	Known RBP	4.5	□□□□□ -1.69
PML39	YML107C	PUG1	P40100	303 aa		4.5	□□□□□ -1.69
PML39	YML107C	PSF2	P40359	213 aa		4.5	□□□□□ -1.69
PML39	YML107C	YPL071C	Q02864	156 aa		4.5	□□□□□ -1.69
PML39	YML107C	ATG16	Q03818	150 aa		4.5	□□□□□ -1.69
PML39	YML107C	SEG1	Q04279	960 aa		4.5	□□□□□ -1.69
PML39	YML107C	BLS1	Q06071	122 aa		4.5	□□□□□ -1.69
PML39	YML107C	CYK3	Q07533	885 aa		4.5	□□□□□ -1.69
PML39	YML107C	YOR389W	Q08912	624 aa		4.5	□□□□□ -1.69
PML39	YML107C	LCB4	Q12246	624 aa		4.5	□□□□□ -1.69
PML39	YML107C	RDL1	Q12305	139 aa	Known RBP	4.5	□□□□□ -1.69
PML39	YML107C	NUC1	P08466	329 aa		4.49	□□□□□ -1.69
PML39	YML107C	GSY2	P27472	705 aa		4.49	□□□□□ -1.69
PML39	YML107C	DBF20	P32328	564 aa		4.49	□□□□□ -1.69
PML39	YML107C	FSH1	P38777	243 aa	Known RBP	4.49	□□□□□ -1.69
PML39	YML107C	ZAP1	P47043	880 aa		4.49	□□□□□ -1.69
PML39	YML107C	UBX6	P47049	396 aa		4.49	□□□□□ -1.69
PML39	YML107C	RIM13	Q03792	727 aa		4.49	□□□□□ -1.69
PML39	YML107C	RVB2	Q12464	471 aa	Known RBP	4.49	□□□□□ -1.69
PML39	YML107C	YBR255C-A	Q3E776	120 aa		4.49	□□□□□ -1.69
PML39	YML107C	PNO1	Q99216	274 aa	Known RBP	4.49	□□□□□ -1.69
PML39	YML107C	PGK1	P00560	416 aa	Known RBP	4.48	□□□□□ -1.69
PML39	YML107C	ILV2	P07342	687 aa	Known RBP	4.48	□□□□□ -1.69
PML39	YML107C	APN1	P22936	367 aa		4.48	□□□□□ -1.69
PML39	YML107C	RRP43	P25359	394 aa	Predicted RBP	4.48	□□□□□ -1.69
PML39	YML107C	YJU2	P28320	278 aa	Predicted RBP	4.48	□□□□□ -1.69
PML39	YML107C	NUP120	P35729	1037 aa		4.48	□□□□□ -1.69
PML39	YML107C	RPT2	P40327	437 aa	Known RBP	4.48	□□□□□ -1.69
PML39	YML107C	IMA1	P53051	589 aa		4.48	□□□□□ -1.69
PML39	YML107C	MRPL13	Q02204	264 aa		4.48	□□□□□ -1.69
PML39	YML107C	TRS130	Q03660	1102 aa		4.48	□□□□□ -1.69
PML39	YML107C	HRD3	Q05787	833 aa		4.48	□□□□□ -1.69
PML39	YML107C	YPL191C	Q08930	360 aa		4.48	□□□□□ -1.69
PML39	YML107C	URE2	P23202	354 aa	Known RBP	4.47	□□□□□ -1.69
PML39	YML107C	VPS8	P39702	1274 aa		4.47	□□□□□ -1.69
PML39	YML107C	SAP185	P40856	1058 aa		4.47	□□□□□ -1.69
PML39	YML107C	SAE2	P46946	345 aa		4.47	□□□□□ -1.69
PML39	YML107C	MTG1	Q03151	367 aa	Predicted RBP	4.47	□□□□□ -1.69
PML39	YML107C	TPO3	Q06451	622 aa		4.47	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 32.5 ms