RNA–Protein interactions for RNA: YML029W

USA1, Transcript of Scaffold subunit of the Hrd1p ubiquitin ligase, yeastyeast

Gene USA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USA1YML029W EDC3P39998 551 aaKnown RBP3.99□□□□□ -1.77
USA1YML029W YMR134WP40207 237 aa3.99□□□□□ -1.77
USA1YML029W KHA1P40309 873 aa3.99□□□□□ -1.77
USA1YML029W IST3P40565 148 aaPredicted RBP3.99□□□□□ -1.77
USA1YML029W RGD2P43556 714 aa3.99□□□□□ -1.77
USA1YML029W SEG1Q04279 960 aa3.99□□□□□ -1.77
USA1YML029W SPG3Q04398 127 aaPredicted RBP3.99□□□□□ -1.77
USA1YML029W IMA2Q08295 589 aa3.99□□□□□ -1.77
USA1YML029W SGO1Q08490 590 aa3.99□□□□□ -1.77
USA1YML029W VPS13Q07878 3144 aa3.99□□□□□ -1.77
USA1YML029W RAD10P06838 210 aa3.98□□□□□ -1.77
USA1YML029W PRP9P19736 530 aaKnown RBP3.98□□□□□ -1.77
USA1YML029W HSP60P19882 572 aaKnown RBP3.98□□□□□ -1.77
USA1YML029W KIN3P22209 435 aa3.98□□□□□ -1.77
USA1YML029W MIH1P23748 554 aa3.98□□□□□ -1.77
USA1YML029W GPI10P30777 616 aa3.98□□□□□ -1.77
USA1YML029W GCD6P32501 712 aaKnown RBP3.98□□□□□ -1.77
USA1YML029W RPC37P36121 282 aa3.98□□□□□ -1.77
USA1YML029W LAS1P36146 502 aaPredicted RBP3.98□□□□□ -1.77
USA1YML029W SIF2P38262 535 aa3.98□□□□□ -1.77
USA1YML029W POP4P38336 279 aa3.98□□□□□ -1.77
USA1YML029W BIT2P38346 545 aa3.98□□□□□ -1.77
USA1YML029W MIC19P43594 170 aa3.98□□□□□ -1.77
USA1YML029W PRP24P49960 444 aaKnown RBP3.98□□□□□ -1.77
USA1YML029W ROM1P53046 1155 aa3.98□□□□□ -1.77
USA1YML029W ALG12P53730 551 aa3.98□□□□□ -1.77
USA1YML029W UTP6Q02354 440 aaKnown RBP3.98□□□□□ -1.77
USA1YML029W ELP3Q02908 557 aaKnown RBP3.98□□□□□ -1.77
USA1YML029W RLI1Q03195 608 aaKnown RBP3.98□□□□□ -1.77
USA1YML029W YSH1Q06224 779 aaPredicted RBP3.98□□□□□ -1.77
USA1YML029W ADY3Q07732 790 aa3.98□□□□□ -1.77
USA1YML029W EFG1Q3E705 233 aaKnown RBP3.98□□□□□ -1.77
USA1YML029W QCR6P00127 147 aa3.98□□□□□ -1.77
USA1YML029W SLY41P22215 453 aa3.98□□□□□ -1.77
USA1YML029W PUF4P25339 888 aaKnown RBP RIP-Chip data3.98□□□□□ -1.77not detected
USA1YML029W PUP3P25451 205 aaKnown RBP3.98□□□□□ -1.77
USA1YML029W PEX5P35056 612 aa3.98□□□□□ -1.77
USA1YML029W ADD66P36040 267 aa3.98□□□□□ -1.77
USA1YML029W MSG5P38590 489 aa3.98□□□□□ -1.77
USA1YML029W SRP68P38687 599 aaKnown RBP3.98□□□□□ -1.77
USA1YML029W YNL320WP42840 284 aa3.98□□□□□ -1.77
USA1YML029W LSB3P43603 459 aaKnown RBP3.98□□□□□ -1.77
USA1YML029W SNG1P46950 547 aa3.98□□□□□ -1.77
USA1YML029W NMD5P46970 1048 aa3.98□□□□□ -1.77
USA1YML029W LSC1P53598 329 aaKnown RBP3.98□□□□□ -1.77
USA1YML029W SLT2Q00772 484 aa3.98□□□□□ -1.77
USA1YML029W PML39Q03760 334 aa3.98□□□□□ -1.77
USA1YML029W PNP1Q05788 311 aa3.98□□□□□ -1.77
USA1YML029W CDC73Q06697 393 aa3.98□□□□□ -1.77
USA1YML029W CET1O13297 549 aaPredicted RBP3.97□□□□□ -1.77
USA1YML029W KEX2P13134 814 aa3.97□□□□□ -1.77
USA1YML029W PEX1P24004 1043 aa3.97□□□□□ -1.77
USA1YML029W TOA1P32773 286 aa3.97□□□□□ -1.77
USA1YML029W PEX2P32800 271 aa3.97□□□□□ -1.77
USA1YML029W TOM20P35180 183 aa3.97□□□□□ -1.77
USA1YML029W YKL151CP36059 337 aa3.97□□□□□ -1.77
USA1YML029W PBP2P38151 413 aaKnown RBP RIP-Chip data3.97□□□□□ -1.77not detected
USA1YML029W SPP381P38282 291 aaPredicted RBP3.97□□□□□ -1.77
USA1YML029W CKB2P38930 258 aa3.97□□□□□ -1.77
USA1YML029W YEL028WP39989 153 aa3.97□□□□□ -1.77
USA1YML029W DOT6P40059 670 aaKnown RBP3.97□□□□□ -1.77
USA1YML029W OSW5P40219 148 aa3.97□□□□□ -1.77
USA1YML029W CHS6P40955 746 aa3.97□□□□□ -1.77
USA1YML029W SAE2P46946 345 aa3.97□□□□□ -1.77
USA1YML029W YJR039WP47107 1121 aa3.97□□□□□ -1.77
USA1YML029W SFB2P53953 876 aa3.97□□□□□ -1.77
USA1YML029W TGL2P54857 326 aa3.97□□□□□ -1.77
USA1YML029W CLU1Q03690 1277 aaKnown RBP3.97□□□□□ -1.77
USA1YML029W IRC10Q08118 586 aa3.97□□□□□ -1.77
USA1YML029W TRE2Q08693 809 aa3.97□□□□□ -1.77
USA1YML029W TRM1P15565 570 aaKnown RBP3.97□□□□□ -1.77
USA1YML029W SPO16P17122 198 aa3.97□□□□□ -1.77
USA1YML029W MET16P18408 261 aaPredicted RBP3.97□□□□□ -1.77
USA1YML029W AAT2P23542 418 aaKnown RBP3.97□□□□□ -1.77
USA1YML029W ADY2P25613 283 aa3.97□□□□□ -1.77
USA1YML029W KIP2P28743 706 aa3.97□□□□□ -1.77
USA1YML029W SMI1P32566 505 aa3.97□□□□□ -1.77
USA1YML029W YME1P32795 747 aa3.97□□□□□ -1.77
USA1YML029W COY1P34237 679 aa3.97□□□□□ -1.77
USA1YML029W MUD2P36084 527 aaKnown RBP3.97□□□□□ -1.77
USA1YML029W YBR056WP38081 501 aa3.97□□□□□ -1.77
USA1YML029W KTR4P38131 464 aa3.97□□□□□ -1.77
USA1YML029W VHC1P38329 1120 aa3.97□□□□□ -1.77
USA1YML029W MSR1P38714 643 aa3.97□□□□□ -1.77
USA1YML029W NMD3P38861 518 aaKnown RBP3.97□□□□□ -1.77
USA1YML029W DUN1P39009 513 aa3.97□□□□□ -1.77
USA1YML029W FLC2P39719 783 aa3.97□□□□□ -1.77
USA1YML029W RPH1P39956 796 aa3.97□□□□□ -1.77
USA1YML029W DPH1P40487 425 aaKnown RBP3.97□□□□□ -1.77
USA1YML029W PXA1P41909 870 aa3.97□□□□□ -1.77
USA1YML029W BUD13P46947 266 aaPredicted RBP3.97□□□□□ -1.77
USA1YML029W PYK2P52489 506 aaKnown RBP3.97□□□□□ -1.77
USA1YML029W ACS2P52910 683 aaKnown RBP3.97□□□□□ -1.77
USA1YML029W NOP15P53927 220 aaPredicted RBP3.97□□□□□ -1.77
USA1YML029W ORC3P54790 616 aa3.97□□□□□ -1.77
USA1YML029W RSC4Q02206 625 aa3.97□□□□□ -1.77
USA1YML029W CCE1Q03702 353 aa3.97□□□□□ -1.77
USA1YML029W TMN2Q04562 672 aa3.97□□□□□ -1.77
USA1YML029W LDB18Q07887 179 aa3.97□□□□□ -1.77
USA1YML029W PUF2Q12221 1075 aaKnown RBP RIP-Chip data3.97□□□□□ -1.77not detected
Retrieved 100 of 5,963 RNA–protein pairs in 26.1 ms