RNA–Protein interactions for RNA: YLR417W

VPS36, Transcript of Component of the ESCRT-II complex, yeastyeast

Gene VPS36, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS36YLR417W KSP1P38691 1029 aaKnown RBP5.46□□□□□ -1.54
VPS36YLR417W UBP5P39944 805 aa5.46□□□□□ -1.54
VPS36YLR417W ARG2P40360 574 aa5.46□□□□□ -1.54
VPS36YLR417W COG1P53079 417 aa5.46□□□□□ -1.54
VPS36YLR417W NBP2Q12163 236 aa5.46□□□□□ -1.54
VPS36YLR417W CCL1P37366 393 aa5.45□□□□□ -1.54
VPS36YLR417W ESL1P40456 1118 aa5.45□□□□□ -1.54
VPS36YLR417W NMA2P53204 395 aa5.45□□□□□ -1.54
VPS36YLR417W CRF1Q04930 467 aa5.45□□□□□ -1.54
VPS36YLR417W SDH5Q08230 162 aa5.45□□□□□ -1.54
VPS36YLR417W YPL216WQ08964 1102 aa5.45□□□□□ -1.54
VPS36YLR417W ATP2P00830 511 aaKnown RBP5.45□□□□□ -1.54
VPS36YLR417W TY2A-LR1P0C2J4 438 aa5.45□□□□□ -1.54
VPS36YLR417W TY2A-FP0CX61 438 aa5.45□□□□□ -1.54
VPS36YLR417W TY2A-GR2P0CX62 438 aa5.45□□□□□ -1.54
VPS36YLR417W AAC3P18238 307 aa5.45□□□□□ -1.54
VPS36YLR417W TY2A-CP25383 438 aa5.45□□□□□ -1.54
VPS36YLR417W CNE1P27825 502 aa5.45□□□□□ -1.54
VPS36YLR417W YHL017WP38745 532 aa5.45□□□□□ -1.54
VPS36YLR417W NDC80P40460 691 aa5.45□□□□□ -1.54
VPS36YLR417W CTR1P49573 406 aa5.45□□□□□ -1.54
VPS36YLR417W BSC5P53755 489 aa5.45□□□□□ -1.54
VPS36YLR417W SMX3P54999 86 aaPredicted RBP5.45□□□□□ -1.54
VPS36YLR417W RPS15Q01855 142 aaKnown RBP5.45□□□□□ -1.54
VPS36YLR417W MTG1Q03151 367 aaPredicted RBP5.45□□□□□ -1.54
VPS36YLR417W TY2A-DR2Q03483 438 aa5.45□□□□□ -1.54
VPS36YLR417W GSF2Q04697 403 aaKnown RBP5.45□□□□□ -1.54
VPS36YLR417W TGS1Q12052 315 aa5.45□□□□□ -1.54
VPS36YLR417W TY2A-BQ12260 438 aa5.45□□□□□ -1.54
VPS36YLR417W TY2A-OR2Q12293 438 aa5.45□□□□□ -1.54
VPS36YLR417W TY2A-DR1Q12392 438 aa5.45□□□□□ -1.54
VPS36YLR417W TY2A-OR1Q12439 438 aa5.45□□□□□ -1.54
VPS36YLR417W YBR255C-AQ3E776 120 aa5.45□□□□□ -1.54
VPS36YLR417W TY2A-DR3Q99303 438 aa5.45□□□□□ -1.54
VPS36YLR417W YLR302CO13544 120 aa5.44□□□□□ -1.54
VPS36YLR417W CDC5P32562 705 aa5.44□□□□□ -1.54
VPS36YLR417W TAM41P53230 385 aa5.44□□□□□ -1.54
VPS36YLR417W BUD17P53727 317 aa5.44□□□□□ -1.54
VPS36YLR417W STE4P18851 423 aa5.43□□□□□ -1.54
VPS36YLR417W URK1P27515 501 aa5.43□□□□□ -1.54
VPS36YLR417W TRM2P33753 639 aa5.43□□□□□ -1.54
VPS36YLR417W LOT5P34234 306 aa5.43□□□□□ -1.54
VPS36YLR417W CBR1P38626 284 aaKnown RBP5.43□□□□□ -1.54
VPS36YLR417W ASE1P50275 885 aa5.43□□□□□ -1.54
VPS36YLR417W YIP4P53093 235 aa5.43□□□□□ -1.54
VPS36YLR417W RCO1Q04779 684 aa5.43□□□□□ -1.54
VPS36YLR417W SKM1Q12469 655 aa5.43□□□□□ -1.54
VPS36YLR417W MRP7P12687 371 aa5.43□□□□□ -1.54
VPS36YLR417W SPO16P17122 198 aa5.43□□□□□ -1.54
VPS36YLR417W PCL5P38794 229 aa5.43□□□□□ -1.54
VPS36YLR417W YJL206CP39529 758 aa5.43□□□□□ -1.54
VPS36YLR417W BUD16P39988 312 aa5.43□□□□□ -1.54
VPS36YLR417W YJR061WP40355 935 aa5.43□□□□□ -1.54
VPS36YLR417W SIP4P46954 829 aa5.43□□□□□ -1.54
VPS36YLR417W YKU80Q04437 629 aa5.43□□□□□ -1.54
VPS36YLR417W PNO1Q99216 274 aaKnown RBP5.43□□□□□ -1.54
VPS36YLR417W SPA2P23201 1466 aaKnown RBP5.42□□□□□ -1.54
VPS36YLR417W LAM4P38800 1345 aa5.42□□□□□ -1.54
VPS36YLR417W PDE1P22434 369 aa5.42□□□□□ -1.54
VPS36YLR417W GMH1P36125 273 aa5.42□□□□□ -1.54
VPS36YLR417W GLG1P36143 616 aa5.42□□□□□ -1.54
VPS36YLR417W UBS1P38290 277 aa5.42□□□□□ -1.54
VPS36YLR417W LNP1P38878 278 aa5.42□□□□□ -1.54
VPS36YLR417W ARC1P46672 376 aaKnown RBP5.42□□□□□ -1.54
VPS36YLR417W VPS4P52917 437 aa5.42□□□□□ -1.54
VPS36YLR417W KIN4Q01919 800 aa5.42□□□□□ -1.54
VPS36YLR417W NGL2Q03264 515 aaKnown RBP5.42□□□□□ -1.54
VPS36YLR417W ATG23Q06671 453 aa5.42□□□□□ -1.54
VPS36YLR417W ERG27Q12452 347 aaKnown RBP5.42□□□□□ -1.54
VPS36YLR417W RVB2Q12464 471 aaKnown RBP5.42□□□□□ -1.54
VPS36YLR417W RPB2P08518 1224 aaKnown RBP5.41□□□□□ -1.54
VPS36YLR417W MRP20P32387 263 aa5.41□□□□□ -1.54
VPS36YLR417W NOP4P37838 685 aaKnown RBP5.41□□□□□ -1.54
VPS36YLR417W YPT10P38146 199 aa5.41□□□□□ -1.54
VPS36YLR417W PIH1P38768 344 aa5.41□□□□□ -1.54
VPS36YLR417W YIL161WP40449 235 aaKnown RBP5.41□□□□□ -1.54
VPS36YLR417W GIR2Q03768 265 aaPredicted RBP5.41□□□□□ -1.54
VPS36YLR417W GTB1Q04924 702 aa5.41□□□□□ -1.54
VPS36YLR417W YDL073WQ07454 984 aa5.41□□□□□ -1.54
VPS36YLR417W TMA16Q08687 178 aa5.41□□□□□ -1.54
VPS36YLR417W NUS1Q12063 375 aa5.41□□□□□ -1.54
VPS36YLR417W YER175W-AQ8TGU4 54 aa5.41□□□□□ -1.54
VPS36YLR417W AAC1P04710 309 aa5.4□□□□□ -1.54
VPS36YLR417W KGD2P19262 463 aaPredicted RBP5.4□□□□□ -1.54
VPS36YLR417W CMK1P27466 446 aaKnown RBP5.4□□□□□ -1.54
VPS36YLR417W SGS1P35187 1447 aa5.4□□□□□ -1.54
VPS36YLR417W ESL2P36168 1195 aa5.4□□□□□ -1.54
VPS36YLR417W GEX2P36173 615 aa5.4□□□□□ -1.54
VPS36YLR417W TDP1P38319 544 aa5.4□□□□□ -1.54
VPS36YLR417W REG1Q00816 1014 aa5.4□□□□□ -1.54
VPS36YLR417W TRS23Q03784 219 aa5.4□□□□□ -1.54
VPS36YLR417W SWT1Q12104 458 aa5.4□□□□□ -1.54
VPS36YLR417W CDC24P11433 854 aaPredicted RBP5.4□□□□□ -1.55
VPS36YLR417W YPK1P12688 680 aaKnown RBP5.4□□□□□ -1.55
VPS36YLR417W ARO9P38840 513 aaPredicted RBP5.4□□□□□ -1.55
VPS36YLR417W AIM21P40563 679 aa5.4□□□□□ -1.55
VPS36YLR417W LYS14P40971 790 aa5.4□□□□□ -1.55
VPS36YLR417W SPC98P53540 846 aa5.4□□□□□ -1.55
VPS36YLR417W ESC8Q08119 714 aa5.4□□□□□ -1.55
VPS36YLR417W ACF2Q12168 779 aa5.4□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 35.4 ms