RNA–Protein interactions for RNA: YLR164W

SHH4, Transcript of Putative alternate subunit of succinate dehydrogenase (SDH), yeastyeast

Gene SHH4, Length 507 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHH4YLR164W ADI1Q03677 179 aa10.23□□□□□ -0.77
SHH4YLR164W BUD22Q04347 519 aaKnown RBP10.23□□□□□ -0.77
SHH4YLR164W GRX8Q05926 109 aa10.23□□□□□ -0.77
SHH4YLR164W YCS4Q06156 1176 aa10.23□□□□□ -0.77
SHH4YLR164W CUE5Q08412 411 aaKnown RBP10.23□□□□□ -0.77
SHH4YLR164W RUD3Q12234 484 aaKnown RBP10.23□□□□□ -0.77
SHH4YLR164W ILS1P09436 1072 aaKnown RBP10.22□□□□□ -0.77
SHH4YLR164W HMG2P12684 1045 aa10.22□□□□□ -0.77
SHH4YLR164W MRS6P32864 603 aaKnown RBP10.22□□□□□ -0.77
SHH4YLR164W SRP101P32916 621 aa10.22□□□□□ -0.77
SHH4YLR164W MRX6P48564 524 aa10.22□□□□□ -0.77
SHH4YLR164W AAD15Q08361 143 aa10.22□□□□□ -0.77
SHH4YLR164W SGO1Q08490 590 aa10.22□□□□□ -0.77
SHH4YLR164W SYN8P31377 255 aa10.21□□□□□ -0.77
SHH4YLR164W DLD2P46681 530 aaKnown RBP10.21□□□□□ -0.77
SHH4YLR164W YJL132WP47014 750 aa10.21□□□□□ -0.77
SHH4YLR164W PRP24P49960 444 aaKnown RBP10.21□□□□□ -0.77
SHH4YLR164W AMA1P50082 593 aa10.21□□□□□ -0.77
SHH4YLR164W RTA1P53047 317 aa10.21□□□□□ -0.77
SHH4YLR164W COP1P53622 1201 aaKnown RBP10.21□□□□□ -0.77
SHH4YLR164W YVH1Q02256 364 aaKnown RBP10.21□□□□□ -0.77
SHH4YLR164W KAR9P32526 644 aa10.2□□□□□ -0.78
SHH4YLR164W ELO3P40319 345 aa10.2□□□□□ -0.78
SHH4YLR164W BST1P43571 1029 aa10.2□□□□□ -0.78
SHH4YLR164W RNY1Q02933 434 aaKnown RBP10.2□□□□□ -0.78
SHH4YLR164W ENT5Q03769 411 aaKnown RBP10.2□□□□□ -0.78
SHH4YLR164W MSH6Q03834 1242 aa10.2□□□□□ -0.78
SHH4YLR164W TDA5Q06417 326 aaKnown RBP10.2□□□□□ -0.78
SHH4YLR164W OMS1Q06668 471 aa10.2□□□□□ -0.78
SHH4YLR164W YET3Q07451 203 aa10.2□□□□□ -0.78
SHH4YLR164W NDD1Q08887 554 aa10.2□□□□□ -0.78
SHH4YLR164W LDB17Q12342 491 aa10.2□□□□□ -0.78
SHH4YLR164W SIR1P21691 654 aa10.19□□□□□ -0.78
SHH4YLR164W YCR051WP25631 222 aa10.19□□□□□ -0.78
SHH4YLR164W GDA1P32621 518 aa10.19□□□□□ -0.78
SHH4YLR164W ETR1P38071 380 aa10.19□□□□□ -0.78
SHH4YLR164W KTR4P38131 464 aa10.19□□□□□ -0.78
SHH4YLR164W FUI1P38196 639 aa10.19□□□□□ -0.78
SHH4YLR164W SPC97P38863 823 aa10.19□□□□□ -0.78
SHH4YLR164W MOB1P40484 314 aa10.19□□□□□ -0.78
SHH4YLR164W ROK1P45818 564 aaPredicted RBP10.19□□□□□ -0.78
SHH4YLR164W PCL10P53124 433 aa10.19□□□□□ -0.78
SHH4YLR164W REG1Q00816 1014 aa10.19□□□□□ -0.78
SHH4YLR164W PML39Q03760 334 aa10.19□□□□□ -0.78
SHH4YLR164W RTN1Q04947 295 aaKnown RBP10.19□□□□□ -0.78
SHH4YLR164W ACO1P19414 778 aaKnown RBP RIP-Chip data10.18□□□□□ -0.78not detected
SHH4YLR164W YCL068CP25593 260 aa10.18□□□□□ -0.78
SHH4YLR164W COQ8P27697 501 aa10.18□□□□□ -0.78
SHH4YLR164W URA10P30402 227 aa10.18□□□□□ -0.78
SHH4YLR164W POL12P38121 705 aaPredicted RBP10.18□□□□□ -0.78
SHH4YLR164W ATG12P38316 186 aa10.18□□□□□ -0.78
SHH4YLR164W VPS41P38959 992 aa10.18□□□□□ -0.78
SHH4YLR164W MEF2P39677 819 aa10.18□□□□□ -0.78
SHH4YLR164W DPH1P40487 425 aaKnown RBP10.18□□□□□ -0.78
SHH4YLR164W CCT8P47079 568 aaKnown RBP10.18□□□□□ -0.78
SHH4YLR164W YNR063WP53749 607 aa10.18□□□□□ -0.78
SHH4YLR164W KTR5P53966 522 aaPredicted RBP10.18□□□□□ -0.78
SHH4YLR164W RNT1Q02555 471 aa10.18□□□□□ -0.78
SHH4YLR164W YLR012CQ07927 99 aa10.18□□□□□ -0.78
SHH4YLR164W PEX15Q08215 383 aa10.18□□□□□ -0.78
SHH4YLR164W ERG20P08524 352 aaKnown RBP10.17□□□□□ -0.78
SHH4YLR164W MIS1P09440 975 aaKnown RBP10.17□□□□□ -0.78
SHH4YLR164W SSC1P0CS90 654 aaKnown RBP10.17□□□□□ -0.78
SHH4YLR164W SRV2P17555 526 aaKnown RBP10.17□□□□□ -0.78
SHH4YLR164W MRPL25P23369 157 aa10.17□□□□□ -0.78
SHH4YLR164W SGE1P33335 543 aa10.17□□□□□ -0.78
SHH4YLR164W BIO4P53630 237 aa10.17□□□□□ -0.78
SHH4YLR164W SLT2Q00772 484 aa10.17□□□□□ -0.78
SHH4YLR164W TMN2Q04562 672 aa10.17□□□□□ -0.78
SHH4YLR164W FAR8Q05040 523 aa10.17□□□□□ -0.78
SHH4YLR164W BUD20Q08004 166 aaPredicted RBP10.17□□□□□ -0.78
SHH4YLR164W NCA2Q12374 616 aa10.17□□□□□ -0.78
SHH4YLR164W HSP26P15992 214 aaKnown RBP RIP-Chip data10.16□□□□□ -0.78not detected
SHH4YLR164W ARF2P19146 181 aaKnown RBP10.16□□□□□ -0.78
SHH4YLR164W AAT2P23542 418 aaKnown RBP10.16□□□□□ -0.78
SHH4YLR164W PSE1P32337 1089 aaKnown RBP10.16□□□□□ -0.78
SHH4YLR164W SMI1P32566 505 aa10.16□□□□□ -0.78
SHH4YLR164W YBR032WP38223 100 aa10.16□□□□□ -0.78
SHH4YLR164W SRP68P38687 599 aaKnown RBP10.16□□□□□ -0.78
SHH4YLR164W OAF1P39720 1047 aaPredicted RBP10.16□□□□□ -0.78
SHH4YLR164W VAC8P39968 578 aa10.16□□□□□ -0.78
SHH4YLR164W UBP7P40453 1071 aa10.16□□□□□ -0.78
SHH4YLR164W STR3P53101 465 aaKnown RBP10.16□□□□□ -0.78
SHH4YLR164W HST2P53686 357 aa10.16□□□□□ -0.78
SHH4YLR164W SIW14P53965 281 aa10.16□□□□□ -0.78
SHH4YLR164W DOS2P54858 310 aa10.16□□□□□ -0.78
SHH4YLR164W YPL014WQ02606 381 aa10.16□□□□□ -0.78
SHH4YLR164W YMR206WQ03695 313 aa10.16□□□□□ -0.78
SHH4YLR164W NSE5Q03718 556 aa10.16□□□□□ -0.78
SHH4YLR164W SEG1Q04279 960 aa10.16□□□□□ -0.78
SHH4YLR164W SLP1Q12232 587 aa10.16□□□□□ -0.78
SHH4YLR164W INO1P11986 533 aa10.15□□□□□ -0.78
SHH4YLR164W REV1P12689 985 aa10.15□□□□□ -0.78
SHH4YLR164W CLN1P20437 546 aa10.15□□□□□ -0.78
SHH4YLR164W RAM1P22007 431 aa10.15□□□□□ -0.78
SHH4YLR164W AMS1P22855 1083 aa10.15□□□□□ -0.78
SHH4YLR164W ADD66P36040 267 aa10.15□□□□□ -0.78
SHH4YLR164W ALY1P36117 915 aa10.15□□□□□ -0.78
SHH4YLR164W SET3P36124 751 aa10.15□□□□□ -0.78
SHH4YLR164W SLX8P40072 274 aa10.15□□□□□ -0.78
Retrieved 100 of 5,963 RNA–protein pairs in 20.3 ms