RNA–Protein interactions for RNA: YKR029C

SET3, Transcript of Defining member of the SET3 histone deacetylase complex, yeastyeast

Gene SET3, Length 2,256 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SET3YKR029C PET122P10355 254 aa1.45□□□□□ -2.18
SET3YKR029C YPK1P12688 680 aaKnown RBP1.45□□□□□ -2.18
SET3YKR029C STE12P13574 688 aa1.45□□□□□ -2.18
SET3YKR029C SAT4P25333 603 aaKnown RBP1.45□□□□□ -2.18
SET3YKR029C YCL049CP25577 312 aa1.45□□□□□ -2.18
SET3YKR029C ILV6P25605 309 aaKnown RBP1.45□□□□□ -2.18
SET3YKR029C YCR061WP25639 631 aa1.45□□□□□ -2.18
SET3YKR029C SSH4P32343 579 aa1.45□□□□□ -2.18
SET3YKR029C CDC5P32562 705 aa1.45□□□□□ -2.18
SET3YKR029C SIP1P32578 815 aa1.45□□□□□ -2.18
SET3YKR029C FRD1P32614 470 aaKnown RBP1.45□□□□□ -2.18
SET3YKR029C UGP1P32861 499 aaKnown RBP1.45□□□□□ -2.18
SET3YKR029C PSY4P38193 441 aa1.45□□□□□ -2.18
SET3YKR029C MTG2P38860 518 aa1.45□□□□□ -2.18
SET3YKR029C YEL020CP39994 560 aa1.45□□□□□ -2.18
SET3YKR029C KAP123P40069 1113 aaKnown RBP1.45□□□□□ -2.18
SET3YKR029C SAP4P53036 818 aa1.45□□□□□ -2.18
SET3YKR029C ESF2P53743 316 aaKnown RBP1.45□□□□□ -2.18
SET3YKR029C YNL058CP53947 316 aa1.45□□□□□ -2.18
SET3YKR029C MOT3P54785 490 aaKnown RBP1.45□□□□□ -2.18
SET3YKR029C USA1Q03714 838 aa1.45□□□□□ -2.18
SET3YKR029C YMR018WQ04364 514 aa1.45□□□□□ -2.18
SET3YKR029C CRF1Q04930 467 aa1.45□□□□□ -2.18
SET3YKR029C AIM6Q07716 390 aa1.45□□□□□ -2.18
SET3YKR029C ADE5,7P07244 802 aaKnown RBP1.44□□□□□ -2.18
SET3YKR029C ADE3P07245 946 aaKnown RBP1.44□□□□□ -2.18
SET3YKR029C HEM1P09950 548 aaPredicted RBP1.44□□□□□ -2.18
SET3YKR029C BIK1P11709 440 aa1.44□□□□□ -2.18
SET3YKR029C APA1P16550 321 aaKnown RBP1.44□□□□□ -2.18
SET3YKR029C PRE2P30656 287 aaKnown RBP1.44□□□□□ -2.18
SET3YKR029C ARP2P32381 391 aaKnown RBP1.44□□□□□ -2.18
SET3YKR029C SLC1P33333 303 aa1.44□□□□□ -2.18
SET3YKR029C TEF4P36008 412 aaKnown RBP1.44□□□□□ -2.18
SET3YKR029C RPF2P36160 344 aaKnown RBP1.44□□□□□ -2.18
SET3YKR029C PUG1P40100 303 aa1.44□□□□□ -2.18
SET3YKR029C ASN1P49089 572 aaKnown RBP1.44□□□□□ -2.18
SET3YKR029C MRK1P50873 501 aa1.44□□□□□ -2.18
SET3YKR029C COG2P53271 262 aa1.44□□□□□ -2.18
SET3YKR029C GTR1Q00582 310 aa1.44□□□□□ -2.18
SET3YKR029C RPS15Q01855 142 aaKnown RBP1.44□□□□□ -2.18
SET3YKR029C MSL5Q12186 476 aaKnown RBP RIP-Chip data1.44□□□□□ -2.18not detected
SET3YKR029C YBR255C-AQ3E776 120 aa1.44□□□□□ -2.18
SET3YKR029C TPK1P06244 397 aa1.43□□□□□ -2.18
SET3YKR029C MTF2P10849 440 aa1.43□□□□□ -2.18
SET3YKR029C SPO16P17122 198 aa1.43□□□□□ -2.18
SET3YKR029C RNR3P21672 869 aaKnown RBP1.43□□□□□ -2.18
SET3YKR029C UBC1P21734 215 aaKnown RBP1.43□□□□□ -2.18
SET3YKR029C SWI4P25302 1093 aaKnown RBP1.43□□□□□ -2.18
SET3YKR029C RER1P25560 188 aa1.43□□□□□ -2.18
SET3YKR029C RPC34P32910 317 aa1.43□□□□□ -2.18
SET3YKR029C CNS1P33313 385 aa1.43□□□□□ -2.18
SET3YKR029C UBS1P38290 277 aa1.43□□□□□ -2.18
SET3YKR029C NAB3P38996 802 aaKnown RBP RIP-Chip data1.43□□□□□ -2.18not detected
SET3YKR029C FUN12P39730 1002 aaKnown RBP1.43□□□□□ -2.18
SET3YKR029C MIT1P40002 666 aa1.43□□□□□ -2.18
SET3YKR029C ARB1P40024 610 aaKnown RBP1.43□□□□□ -2.18
SET3YKR029C YIL161WP40449 235 aaKnown RBP1.43□□□□□ -2.18
SET3YKR029C BST1P43571 1029 aa1.43□□□□□ -2.18
SET3YKR029C ZAP1P47043 880 aa1.43□□□□□ -2.18
SET3YKR029C UBX6P47049 396 aa1.43□□□□□ -2.18
SET3YKR029C YGL117WP53133 265 aa1.43□□□□□ -2.18
SET3YKR029C MTG1Q03151 367 aaPredicted RBP1.43□□□□□ -2.18
SET3YKR029C WAR1Q03631 944 aa1.43□□□□□ -2.18
SET3YKR029C CSR1Q06705 408 aaKnown RBP1.43□□□□□ -2.18
SET3YKR029C OPY2Q06810 360 aa1.43□□□□□ -2.18
SET3YKR029C ULA1Q12059 462 aa1.43□□□□□ -2.18
SET3YKR029C AHA1Q12449 350 aaKnown RBP1.43□□□□□ -2.18
SET3YKR029C RVB2Q12464 471 aaKnown RBP1.43□□□□□ -2.18
SET3YKR029C SPA2P23201 1466 aaKnown RBP1.43□□□□□ -2.18
SET3YKR029C KOG1P38873 1557 aa1.43□□□□□ -2.18
SET3YKR029C CHO2P05374 869 aaKnown RBP1.43□□□□□ -2.18
SET3YKR029C RPL7AP05737 244 aaKnown RBP1.43□□□□□ -2.18
SET3YKR029C KGD2P19262 463 aaPredicted RBP1.43□□□□□ -2.18
SET3YKR029C PPZ2P33329 710 aa1.43□□□□□ -2.18
SET3YKR029C YBR138CP38277 524 aa1.43□□□□□ -2.18
SET3YKR029C PAC2P39937 518 aa1.43□□□□□ -2.18
SET3YKR029C RPT2P40327 437 aaKnown RBP1.43□□□□□ -2.18
SET3YKR029C YML131WQ03102 365 aa1.43□□□□□ -2.18
SET3YKR029C ATG23Q06671 453 aa1.43□□□□□ -2.18
SET3YKR029C ICL2Q12031 575 aa1.43□□□□□ -2.18
SET3YKR029C NBP2Q12163 236 aa1.43□□□□□ -2.18
SET3YKR029C RPL7BQ12213 244 aaKnown RBP1.43□□□□□ -2.18
SET3YKR029C ERG27Q12452 347 aaKnown RBP1.43□□□□□ -2.18
SET3YKR029C SWR1Q05471 1514 aa1.42□□□□□ -2.18
SET3YKR029C BI2P03873 423 aa1.42□□□□□ -2.18
SET3YKR029C LEU2P04173 364 aaPredicted RBP1.42□□□□□ -2.18
SET3YKR029C TUB1P09733 447 aaKnown RBP1.42□□□□□ -2.18
SET3YKR029C NCP1P16603 691 aaKnown RBP1.42□□□□□ -2.18
SET3YKR029C PMA2P19657 947 aa1.42□□□□□ -2.18
SET3YKR029C ADY2P25613 283 aa1.42□□□□□ -2.18
SET3YKR029C CDC15P27636 974 aa1.42□□□□□ -2.18
SET3YKR029C BEM3P32873 1128 aa1.42□□□□□ -2.18
SET3YKR029C RRN3P36070 627 aa1.42□□□□□ -2.18
SET3YKR029C YPT10P38146 199 aa1.42□□□□□ -2.18
SET3YKR029C EXO84P38261 753 aa1.42□□□□□ -2.18
SET3YKR029C APD1P38281 316 aa1.42□□□□□ -2.18
SET3YKR029C RIC1P40395 1056 aa1.42□□□□□ -2.18
SET3YKR029C IST3P40565 148 aaPredicted RBP1.42□□□□□ -2.18
SET3YKR029C ERR3P42222 437 aa1.42□□□□□ -2.18
SET3YKR029C CIR1P42940 261 aa1.42□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 20.5 ms