RNA–Protein interactions for RNA: YKL124W

SSH4, Transcript of Specificity factor required for Rsp5p-dependent ubiquitination, yeastyeast

Gene SSH4, Length 1,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSH4YKL124W YJR120WP47157 116 aa4.6□□□□□ -1.67
SSH4YKL124W RAD17P48581 401 aa4.6□□□□□ -1.67
SSH4YKL124W FLC3P53121 802 aa4.6□□□□□ -1.67
SSH4YKL124W NMA2P53204 395 aa4.6□□□□□ -1.67
SSH4YKL124W YGR111WP53265 400 aa4.6□□□□□ -1.67
SSH4YKL124W NIS1P53939 407 aa4.6□□□□□ -1.67
SSH4YKL124W UME1Q03010 460 aa4.6□□□□□ -1.67
SSH4YKL124W TY1A-DR1Q03856 440 aa4.6□□□□□ -1.67
SSH4YKL124W SND1Q04007 877 aa4.6□□□□□ -1.67
SSH4YKL124W TY1A-ML1Q04706 440 aaKnown RBP4.6□□□□□ -1.67
SSH4YKL124W YDR286CQ05530 114 aa4.6□□□□□ -1.67
SSH4YKL124W YOR387CQ08910 206 aa4.6□□□□□ -1.67
SSH4YKL124W TY1A-BRQ12217 440 aa4.6□□□□□ -1.67
SSH4YKL124W EMP46Q12396 444 aa4.6□□□□□ -1.67
SSH4YKL124W TY1A-NL2Q12470 440 aa4.6□□□□□ -1.67
SSH4YKL124W TY1A-GR2Q12485 440 aa4.6□□□□□ -1.67
SSH4YKL124W YOL087CQ99247 1116 aa4.6□□□□□ -1.67
SSH4YKL124W BEM2P39960 2167 aaKnown RBP4.6□□□□□ -1.67
SSH4YKL124W APN1P22936 367 aa4.6□□□□□ -1.67
SSH4YKL124W YIH1P25637 258 aa4.6□□□□□ -1.67
SSH4YKL124W PAT1P25644 796 aaKnown RBP4.6□□□□□ -1.67
SSH4YKL124W RPL5P26321 297 aaKnown RBP4.6□□□□□ -1.67
SSH4YKL124W MCM2P29469 868 aa4.6□□□□□ -1.67
SSH4YKL124W TYE7P33122 291 aaPredicted RBP4.6□□□□□ -1.67
SSH4YKL124W VPS41P38959 992 aa4.6□□□□□ -1.67
SSH4YKL124W DUN1P39009 513 aa4.6□□□□□ -1.67
SSH4YKL124W YIR007WP40566 764 aa4.6□□□□□ -1.67
SSH4YKL124W COQ6P53318 479 aa4.6□□□□□ -1.67
SSH4YKL124W TGL2P54857 326 aa4.6□□□□□ -1.67
SSH4YKL124W HPF1Q05164 967 aa4.6□□□□□ -1.67
SSH4YKL124W SIL1Q08199 421 aa4.6□□□□□ -1.67
SSH4YKL124W RRP6Q12149 733 aaKnown RBP4.6□□□□□ -1.67
SSH4YKL124W SPO21Q12411 609 aa4.6□□□□□ -1.67
SSH4YKL124W TMA17Q12513 150 aa4.6□□□□□ -1.67
SSH4YKL124W TMA7Q3E764 64 aaKnown RBP4.6□□□□□ -1.67
SSH4YKL124W CAN1P04817 590 aa4.59□□□□□ -1.67
SSH4YKL124W ADE3P07245 946 aaKnown RBP4.59□□□□□ -1.67
SSH4YKL124W GYP6P32806 458 aa4.59□□□□□ -1.67
SSH4YKL124W YKL050CP35736 922 aa4.59□□□□□ -1.67
SSH4YKL124W EXO84P38261 753 aa4.59□□□□□ -1.67
SSH4YKL124W LAM1P38851 1228 aa4.59□□□□□ -1.67
SSH4YKL124W PRM9P39551 298 aa4.59□□□□□ -1.67
SSH4YKL124W EXO1P39875 702 aa4.59□□□□□ -1.67
SSH4YKL124W MAD1P40957 749 aa4.59□□□□□ -1.67
SSH4YKL124W BTN2P53286 410 aa4.59□□□□□ -1.67
SSH4YKL124W TDA7P53882 636 aaPredicted RBP4.59□□□□□ -1.67
SSH4YKL124W YMR206WQ03695 313 aa4.59□□□□□ -1.67
SSH4YKL124W RNH1Q04740 348 aa4.59□□□□□ -1.67
SSH4YKL124W SPR28Q04921 423 aa4.59□□□□□ -1.67
SSH4YKL124W GRX8Q05926 109 aa4.59□□□□□ -1.67
SSH4YKL124W OPY2Q06810 360 aa4.59□□□□□ -1.67
SSH4YKL124W AAD4Q07747 329 aa4.59□□□□□ -1.67
SSH4YKL124W YLR012CQ07927 99 aa4.59□□□□□ -1.67
SSH4YKL124W RUD3Q12234 484 aaKnown RBP4.59□□□□□ -1.67
SSH4YKL124W PET111P08468 800 aa4.58□□□□□ -1.68
SSH4YKL124W PYC1P11154 1178 aaKnown RBP4.58□□□□□ -1.68
SSH4YKL124W PET123P17558 318 aa4.58□□□□□ -1.68
SSH4YKL124W MEF1P25039 761 aa4.58□□□□□ -1.68
SSH4YKL124W KTR4P38131 464 aa4.58□□□□□ -1.68
SSH4YKL124W SWC5P38326 303 aa4.58□□□□□ -1.68
SSH4YKL124W RRF1P38771 230 aa4.58□□□□□ -1.68
SSH4YKL124W YER189WP40104 122 aa4.58□□□□□ -1.68
SSH4YKL124W SAP185P40856 1058 aa4.58□□□□□ -1.68
SSH4YKL124W GPP1P41277 250 aaKnown RBP4.58□□□□□ -1.68
SSH4YKL124W PRP24P49960 444 aaKnown RBP4.58□□□□□ -1.68
SSH4YKL124W KEL2P50090 882 aa4.58□□□□□ -1.68
SSH4YKL124W PYK2P52489 506 aaKnown RBP4.58□□□□□ -1.68
SSH4YKL124W CWC24P53769 259 aa4.58□□□□□ -1.68
SSH4YKL124W YNL247WP53852 767 aaKnown RBP4.58□□□□□ -1.68
SSH4YKL124W YNL144CP53907 740 aa4.58□□□□□ -1.68
SSH4YKL124W KTR6P54070 446 aa4.58□□□□□ -1.68
SSH4YKL124W UBX4P54730 416 aa4.58□□□□□ -1.68
SSH4YKL124W NUT2Q06213 157 aa4.58□□□□□ -1.68
SSH4YKL124W ERF2Q06551 359 aa4.58□□□□□ -1.68
SSH4YKL124W PUF2Q12221 1075 aaKnown RBP RIP-Chip data4.58□□□□□ -1.68not detected
SSH4YKL124W YLL054CQ12244 843 aa4.58□□□□□ -1.68
SSH4YKL124W SPO12P17123 173 aa4.58□□□□□ -1.68
SSH4YKL124W CAP1P28495 268 aaKnown RBP4.58□□□□□ -1.68
SSH4YKL124W MET22P32179 357 aa4.58□□□□□ -1.68
SSH4YKL124W PYC2P32327 1180 aaKnown RBP4.58□□□□□ -1.68
SSH4YKL124W SPC110P32380 944 aa4.58□□□□□ -1.68
SSH4YKL124W KAP104P38217 918 aaKnown RBP4.58□□□□□ -1.68
SSH4YKL124W FSH1P38777 243 aaKnown RBP4.58□□□□□ -1.68
SSH4YKL124W RTT107P38850 1070 aa4.58□□□□□ -1.68
SSH4YKL124W MEF2P39677 819 aa4.58□□□□□ -1.68
SSH4YKL124W UBP7P40453 1071 aa4.58□□□□□ -1.68
SSH4YKL124W BST1P43571 1029 aa4.58□□□□□ -1.68
SSH4YKL124W YGR283CP53336 341 aaPredicted RBP4.58□□□□□ -1.68
SSH4YKL124W ERG5P54781 538 aa4.58□□□□□ -1.68
SSH4YKL124W GYL1Q04322 720 aa4.58□□□□□ -1.68
SSH4YKL124W YMR018WQ04364 514 aa4.58□□□□□ -1.68
SSH4YKL124W YOR059CQ08448 450 aaKnown RBP4.58□□□□□ -1.68
SSH4YKL124W NDD1Q08887 554 aa4.58□□□□□ -1.68
SSH4YKL124W PGC1Q08959 321 aa4.58□□□□□ -1.68
SSH4YKL124W HIS1P00498 297 aaKnown RBP4.57□□□□□ -1.68
SSH4YKL124W PAB1P04147 577 aaKnown RBP RIP-Chip data4.57□□□□□ -1.68not detected
SSH4YKL124W MIS1P09440 975 aaKnown RBP4.57□□□□□ -1.68
SSH4YKL124W KAR3P17119 729 aa4.57□□□□□ -1.68
SSH4YKL124W SSH4P32343 579 aa4.57□□□□□ -1.68
SSH4YKL124W ARC19P33204 171 aaKnown RBP4.57□□□□□ -1.68
Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms