RNA–Protein interactions for RNA: YKL096W

CWP1, Transcript of Cell wall mannoprotein that localizes to birth scars of daughter cells, yeast

Gene CWP1, Length 720 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CWP1	YKL096W	PXA1	P41909	870 aa		11.66	□□□□□ -0.54
CWP1	YKL096W	ZIP2	P53061	704 aa		11.66	□□□□□ -0.54
CWP1	YKL096W	TAN1	P53072	289 aa	Predicted RBP	11.66	□□□□□ -0.54
CWP1	YKL096W	ADE13	Q05911	482 aa	Known RBP	11.66	□□□□□ -0.54
CWP1	YKL096W	YLR012C	Q07927	99 aa		11.66	□□□□□ -0.54
CWP1	YKL096W	AFI1	Q99222	893 aa		11.66	□□□□□ -0.54
CWP1	YKL096W	TEF1	P02994	458 aa	Known RBP	11.65	□□□□□ -0.54
CWP1	YKL096W	MRPL25	P23369	157 aa		11.65	□□□□□ -0.54
CWP1	YKL096W	GID7	P25569	745 aa		11.65	□□□□□ -0.54
CWP1	YKL096W	PAT1	P25644	796 aa	Known RBP	11.65	□□□□□ -0.54
CWP1	YKL096W	MSH1	P25846	959 aa		11.65	□□□□□ -0.54
CWP1	YKL096W	COQ8	P27697	501 aa		11.65	□□□□□ -0.54
CWP1	YKL096W	PSE1	P32337	1089 aa	Known RBP	11.65	□□□□□ -0.54
CWP1	YKL096W	VAC8	P39968	578 aa		11.65	□□□□□ -0.54
CWP1	YKL096W	BST1	P43571	1029 aa		11.65	□□□□□ -0.54
CWP1	YKL096W	PRP24	P49960	444 aa	Known RBP	11.65	□□□□□ -0.54
CWP1	YKL096W	GND2	P53319	492 aa		11.65	□□□□□ -0.54
CWP1	YKL096W	MET14	Q02196	202 aa		11.65	□□□□□ -0.54
CWP1	YKL096W	RPN4	Q03465	531 aa		11.65	□□□□□ -0.54
CWP1	YKL096W	ADI1	Q03677	179 aa		11.65	□□□□□ -0.54
CWP1	YKL096W	RTN1	Q04947	295 aa	Known RBP	11.65	□□□□□ -0.54
CWP1	YKL096W	HOS1	Q12214	470 aa		11.65	□□□□□ -0.54
CWP1	YKL096W	OCA6	Q12454	224 aa		11.65	□□□□□ -0.54
CWP1	YKL096W	COX5A	P00424	153 aa		11.64	□□□□□ -0.55
CWP1	YKL096W	SGE1	P33335	543 aa		11.64	□□□□□ -0.55
CWP1	YKL096W	SMF2	P38778	549 aa		11.64	□□□□□ -0.55
CWP1	YKL096W	DPH1	P40487	425 aa	Known RBP	11.64	□□□□□ -0.55
CWP1	YKL096W	RRN7	P40992	514 aa		11.64	□□□□□ -0.55
CWP1	YKL096W	SLT2	Q00772	484 aa		11.64	□□□□□ -0.55
CWP1	YKL096W	YPL014W	Q02606	381 aa		11.64	□□□□□ -0.55
CWP1	YKL096W	KAR9	P32526	644 aa		11.63	□□□□□ -0.55
CWP1	YKL096W	SET3	P36124	751 aa		11.63	□□□□□ -0.55
CWP1	YKL096W	KTR4	P38131	464 aa		11.63	□□□□□ -0.55
CWP1	YKL096W	SPC97	P38863	823 aa		11.63	□□□□□ -0.55
CWP1	YKL096W	ELO3	P40319	345 aa		11.63	□□□□□ -0.55
CWP1	YKL096W	LEE1	Q02799	301 aa	Known RBP	11.63	□□□□□ -0.55
CWP1	YKL096W	NSE5	Q03718	556 aa		11.63	□□□□□ -0.55
CWP1	YKL096W	OMS1	Q06668	471 aa		11.63	□□□□□ -0.55
CWP1	YKL096W	HEM12	P32347	362 aa	Predicted RBP	11.62	□□□□□ -0.55
CWP1	YKL096W	SMI1	P32566	505 aa		11.62	□□□□□ -0.55
CWP1	YKL096W	OYE3	P41816	400 aa	Predicted RBP	11.62	□□□□□ -0.55
CWP1	YKL096W	ROK1	P45818	564 aa	Predicted RBP	11.62	□□□□□ -0.55
CWP1	YKL096W	KTR5	P53966	522 aa	Predicted RBP	11.62	□□□□□ -0.55
CWP1	YKL096W	TOF2	Q02208	771 aa		11.62	□□□□□ -0.55
CWP1	YKL096W	YVH1	Q02256	364 aa	Known RBP	11.62	□□□□□ -0.55
CWP1	YKL096W	YDR344C	Q05510	147 aa		11.62	□□□□□ -0.55
CWP1	YKL096W	YCS4	Q06156	1176 aa		11.62	□□□□□ -0.55
CWP1	YKL096W	TDA5	Q06417	326 aa	Known RBP	11.62	□□□□□ -0.55
CWP1	YKL096W	YCR051W	P25631	222 aa		11.61	□□□□□ -0.55
CWP1	YKL096W	URA10	P30402	227 aa		11.61	□□□□□ -0.55
CWP1	YKL096W	MRS6	P32864	603 aa	Known RBP	11.61	□□□□□ -0.55
CWP1	YKL096W	SRP68	P38687	599 aa	Known RBP	11.61	□□□□□ -0.55
CWP1	YKL096W	YFL012W	P43580	148 aa		11.61	□□□□□ -0.55
CWP1	YKL096W	TRF5	P48561	642 aa	Known RBP	11.61	□□□□□ -0.55
CWP1	YKL096W	ASN2	P49090	572 aa	Known RBP	11.61	□□□□□ -0.55
CWP1	YKL096W	LSC1	P53598	329 aa	Known RBP	11.61	□□□□□ -0.55
CWP1	YKL096W	RPL34A	P87262	121 aa	Predicted RBP	11.61	□□□□□ -0.55
CWP1	YKL096W	SLU7	Q02775	382 aa	Known RBP	11.61	□□□□□ -0.55
CWP1	YKL096W	RLI1	Q03195	608 aa	Known RBP	11.61	□□□□□ -0.55
CWP1	YKL096W	YPR117W	Q06116	2489 aa		11.6	□□□□□ -0.55
CWP1	YKL096W	HSP60	P19882	572 aa	Known RBP	11.6	□□□□□ -0.55
CWP1	YKL096W	AAT2	P23542	418 aa	Known RBP	11.6	□□□□□ -0.55
CWP1	YKL096W	ADD66	P36040	267 aa		11.6	□□□□□ -0.55
CWP1	YKL096W	APM3	P38153	483 aa		11.6	□□□□□ -0.55
CWP1	YKL096W	SIW14	P53965	281 aa		11.6	□□□□□ -0.55
CWP1	YKL096W	SEG1	Q04279	960 aa		11.6	□□□□□ -0.55
CWP1	YKL096W	UTP13	Q05946	817 aa	Known RBP	11.6	□□□□□ -0.55
CWP1	YKL096W	SLD7	Q08457	257 aa		11.6	□□□□□ -0.55
CWP1	YKL096W	SGO1	Q08490	590 aa		11.6	□□□□□ -0.55
CWP1	YKL096W	NDD1	Q08887	554 aa		11.6	□□□□□ -0.55
CWP1	YKL096W	PGC1	Q08959	321 aa		11.6	□□□□□ -0.55
CWP1	YKL096W	GPA2	P10823	449 aa		11.59	□□□□□ -0.55
CWP1	YKL096W	HSF1	P10961	833 aa		11.59	□□□□□ -0.55
CWP1	YKL096W	REV1	P12689	985 aa		11.59	□□□□□ -0.55
CWP1	YKL096W	YKR023W	P36119	530 aa	Known RBP	11.59	□□□□□ -0.55
CWP1	YKL096W	ETR1	P38071	380 aa		11.59	□□□□□ -0.55
CWP1	YKL096W	IST3	P40565	148 aa	Predicted RBP	11.59	□□□□□ -0.55
CWP1	YKL096W	STR3	P53101	465 aa	Known RBP	11.59	□□□□□ -0.55
CWP1	YKL096W	TUB4	P53378	473 aa		11.59	□□□□□ -0.55
CWP1	YKL096W	YNR063W	P53749	607 aa		11.59	□□□□□ -0.55
CWP1	YKL096W	YMR206W	Q03695	313 aa		11.59	□□□□□ -0.55
CWP1	YKL096W	PML39	Q03760	334 aa		11.59	□□□□□ -0.55
CWP1	YKL096W	LDB17	Q12342	491 aa		11.59	□□□□□ -0.55
CWP1	YKL096W	NCA2	Q12374	616 aa		11.59	□□□□□ -0.55
CWP1	YKL096W	INO1	P11986	533 aa		11.58	□□□□□ -0.56
CWP1	YKL096W	ACO1	P19414	778 aa	Known RBP RIP-Chip data	11.58	□□□□□ -0.56	not detected
CWP1	YKL096W	AMS1	P22855	1083 aa		11.58	□□□□□ -0.56
CWP1	YKL096W	YCL068C	P25593	260 aa		11.58	□□□□□ -0.56
CWP1	YKL096W	NDI1	P32340	513 aa		11.58	□□□□□ -0.56
CWP1	YKL096W	PEX5	P35056	612 aa		11.58	□□□□□ -0.56
CWP1	YKL096W	YHL041W	P38730	149 aa		11.58	□□□□□ -0.56
CWP1	YKL096W	AMA1	P50082	593 aa		11.58	□□□□□ -0.56
CWP1	YKL096W	TEP1	P53916	434 aa		11.58	□□□□□ -0.56
CWP1	YKL096W	DOS2	P54858	310 aa		11.58	□□□□□ -0.56
CWP1	YKL096W	FAR8	Q05040	523 aa		11.58	□□□□□ -0.56
CWP1	YKL096W	YET3	Q07451	203 aa		11.58	□□□□□ -0.56
CWP1	YKL096W	YEL077C	Q3E7X8	1277 aa		11.58	□□□□□ -0.56
CWP1	YKL096W	ENO1	P00924	437 aa	Known RBP	11.57	□□□□□ -0.56
CWP1	YKL096W	SRV2	P17555	526 aa	Known RBP	11.57	□□□□□ -0.56
CWP1	YKL096W	KIP2	P28743	706 aa		11.57	□□□□□ -0.56

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