RNA–Protein interactions for RNA: YJL189W

RPL39, Transcript of Ribosomal 60S subunit protein L39, yeastyeast

Gene RPL39, Length 156 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL39YJL189W NOP56Q12460 504 aaKnown RBP RIP-Chip data2.43□□□□□ -2.02not detected
RPL39YJL189W RRI1Q12468 440 aa2.43□□□□□ -2.02
RPL39YJL189W YMR230W-AQ3E7B5 62 aa2.43□□□□□ -2.02
RPL39YJL189W ARG1P22768 420 aa2.42□□□□□ -2.02
RPL39YJL189W DID4P36108 232 aa2.42□□□□□ -2.02
RPL39YJL189W GPP1P41277 250 aaKnown RBP2.42□□□□□ -2.02
RPL39YJL189W CIR1P42940 261 aa2.42□□□□□ -2.02
RPL39YJL189W GPG1P53130 126 aa2.42□□□□□ -2.02
RPL39YJL189W ACS1Q01574 713 aa2.42□□□□□ -2.02
RPL39YJL189W ECM16Q04217 1267 aaKnown RBP2.42□□□□□ -2.02
RPL39YJL189W LYS21Q12122 440 aaKnown RBP2.42□□□□□ -2.02
RPL39YJL189W LCB4Q12246 624 aa2.42□□□□□ -2.02
RPL39YJL189W CHO2P05374 869 aaKnown RBP2.41□□□□□ -2.02
RPL39YJL189W YFL068WP0CX99 160 aa2.41□□□□□ -2.02
RPL39YJL189W YLL066W-AP0CY00 160 aa2.41□□□□□ -2.02
RPL39YJL189W YLL067W-AP0CY01 160 aa2.41□□□□□ -2.02
RPL39YJL189W CNA1P23287 553 aa2.41□□□□□ -2.02
RPL39YJL189W PPG1P32838 368 aa2.41□□□□□ -2.02
RPL39YJL189W YOX1P34161 385 aa2.41□□□□□ -2.02
RPL39YJL189W KES1P35844 434 aaKnown RBP2.41□□□□□ -2.02
RPL39YJL189W FMP46P36141 133 aaKnown RBP2.41□□□□□ -2.02
RPL39YJL189W ARO9P38840 513 aaPredicted RBP2.41□□□□□ -2.02
RPL39YJL189W RNH70P53331 553 aa2.41□□□□□ -2.02
RPL39YJL189W YMR317WQ04893 1140 aa2.41□□□□□ -2.02
RPL39YJL189W YOR378WQ08902 515 aa2.41□□□□□ -2.02
RPL39YJL189W AEP2P22136 580 aa2.4□□□□□ -2.03
RPL39YJL189W PLC1P32383 869 aa2.4□□□□□ -2.03
RPL39YJL189W TOM71P38825 639 aaKnown RBP2.4□□□□□ -2.03
RPL39YJL189W PEA2P40091 420 aa2.4□□□□□ -2.03
RPL39YJL189W RAD26P40352 1085 aa2.4□□□□□ -2.03
RPL39YJL189W UBP7P40453 1071 aa2.4□□□□□ -2.03
RPL39YJL189W IRC5P43610 853 aa2.4□□□□□ -2.03
RPL39YJL189W RNR4P49723 345 aaKnown RBP2.4□□□□□ -2.03
RPL39YJL189W AAT1Q01802 451 aa2.4□□□□□ -2.03
RPL39YJL189W UME1Q03010 460 aa2.4□□□□□ -2.03
RPL39YJL189W YDL242WQ07746 117 aa2.4□□□□□ -2.03
RPL39YJL189W URA3P03962 267 aa2.39□□□□□ -2.03
RPL39YJL189W CBP3P21560 335 aa2.39□□□□□ -2.03
RPL39YJL189W CWH43P25618 953 aa2.39□□□□□ -2.03
RPL39YJL189W SDS24P38314 527 aa2.39□□□□□ -2.03
RPL39YJL189W DED81P38707 554 aaKnown RBP2.39□□□□□ -2.03
RPL39YJL189W EAF5P39995 279 aa2.39□□□□□ -2.03
RPL39YJL189W MAM1P40065 302 aa2.39□□□□□ -2.03
RPL39YJL189W LAS21P40367 830 aa2.39□□□□□ -2.03
RPL39YJL189W MNT2P53059 558 aa2.39□□□□□ -2.03
RPL39YJL189W YNL144CP53907 740 aa2.39□□□□□ -2.03
RPL39YJL189W YNL058CP53947 316 aa2.39□□□□□ -2.03
RPL39YJL189W GSH2Q08220 491 aa2.39□□□□□ -2.03
RPL39YJL189W SES1P07284 462 aaKnown RBP2.38□□□□□ -2.03
RPL39YJL189W GSH1P32477 678 aa2.38□□□□□ -2.03
RPL39YJL189W RRP14P36080 434 aaKnown RBP2.38□□□□□ -2.03
RPL39YJL189W YJL107CP42947 387 aa2.38□□□□□ -2.03
RPL39YJL189W SAD1P43589 448 aa2.38□□□□□ -2.03
RPL39YJL189W CWC2Q12046 339 aaPredicted RBP2.38□□□□□ -2.03
RPL39YJL189W YPR027CQ12079 277 aa2.38□□□□□ -2.03
RPL39YJL189W RTK1Q12100 620 aaPredicted RBP2.38□□□□□ -2.03
RPL39YJL189W NUP145P49687 1317 aa2.38□□□□□ -2.03
RPL39YJL189W PPZ1P26570 692 aa2.37□□□□□ -2.03
RPL39YJL189W PRE2P30656 287 aaKnown RBP2.37□□□□□ -2.03
RPL39YJL189W SRP68P38687 599 aaKnown RBP2.37□□□□□ -2.03
RPL39YJL189W RTT107P38850 1070 aa2.37□□□□□ -2.03
RPL39YJL189W YND1P40009 630 aa2.37□□□□□ -2.03
RPL39YJL189W VRG4P40107 337 aa2.37□□□□□ -2.03
RPL39YJL189W VTC3Q02725 835 aa2.37□□□□□ -2.03
RPL39YJL189W RTT103Q05543 409 aa2.37□□□□□ -2.03
RPL39YJL189W YLR112WQ12130 139 aa2.37□□□□□ -2.03
RPL39YJL189W VPS5Q92331 675 aa2.37□□□□□ -2.03
RPL39YJL189W ORC5P50874 479 aa2.36□□□□□ -2.03
RPL39YJL189W BET4Q00618 327 aa2.36□□□□□ -2.03
RPL39YJL189W FPR4Q06205 392 aaPredicted RBP2.36□□□□□ -2.03
RPL39YJL189W YER175W-AQ8TGU4 54 aa2.36□□□□□ -2.03
RPL39YJL189W LNP1P38878 278 aa2.35□□□□□ -2.03
RPL39YJL189W NOP2P40991 618 aaKnown RBP2.35□□□□□ -2.03
RPL39YJL189W IDS2P46958 469 aa2.35□□□□□ -2.03
RPL39YJL189W PMT3P47190 753 aa2.35□□□□□ -2.03
RPL39YJL189W YGL036WP53185 909 aaPredicted RBP2.35□□□□□ -2.03
RPL39YJL189W YNR029CP53729 429 aaKnown RBP2.35□□□□□ -2.03
RPL39YJL189W YAT1P80235 687 aa2.35□□□□□ -2.03
RPL39YJL189W FAP7Q12055 197 aaPredicted RBP2.35□□□□□ -2.03
RPL39YJL189W DIN7Q12086 430 aa2.35□□□□□ -2.03
RPL39YJL189W TIP41Q12199 356 aa2.35□□□□□ -2.03
RPL39YJL189W HOS1Q12214 470 aa2.35□□□□□ -2.03
RPL39YJL189W YTA7P40340 1379 aa2.35□□□□□ -2.03
RPL39YJL189W NIC96P34077 839 aa2.34□□□□□ -2.03
RPL39YJL189W ARN1P38731 627 aa2.34□□□□□ -2.03
RPL39YJL189W MAD2P40958 196 aa2.34□□□□□ -2.03
RPL39YJL189W SKP2P42843 763 aa2.34□□□□□ -2.03
RPL39YJL189W YPR003CP53394 754 aa2.34□□□□□ -2.03
RPL39YJL189W YNR071CP53757 342 aa2.34□□□□□ -2.03
RPL39YJL189W IZH1Q03419 316 aa2.34□□□□□ -2.03
RPL39YJL189W SKY1Q03656 742 aa2.34□□□□□ -2.03
RPL39YJL189W ILV2P07342 687 aaKnown RBP2.33□□□□□ -2.04
RPL39YJL189W YBR139WP38109 508 aa2.33□□□□□ -2.04
RPL39YJL189W VBA2P38358 474 aaKnown RBP2.33□□□□□ -2.04
RPL39YJL189W VPS41P38959 992 aa2.33□□□□□ -2.04
RPL39YJL189W RRP8P38961 392 aaKnown RBP2.33□□□□□ -2.04
RPL39YJL189W GPP2P40106 250 aaKnown RBP2.33□□□□□ -2.04
RPL39YJL189W GSM1P42950 618 aa2.33□□□□□ -2.04
RPL39YJL189W QRI7P43122 407 aa2.33□□□□□ -2.04
RPL39YJL189W CRF1Q04930 467 aa2.33□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms