RNA–Protein interactions for RNA: YHR200W

RPN10, Transcript of Non-ATPase base subunit of the 19S RP of the 26S proteasome, yeastyeast

Gene RPN10, Length 807 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN10YHR200W YNL018CP53976 612 aa14.19□□□□□ -0.14
RPN10YHR200W MET14Q02196 202 aa14.19□□□□□ -0.14
RPN10YHR200W ADE13Q05911 482 aaKnown RBP14.19□□□□□ -0.14
RPN10YHR200W NCA2Q12374 616 aa14.19□□□□□ -0.14
RPN10YHR200W LPX1Q12405 387 aaKnown RBP14.19□□□□□ -0.14
RPN10YHR200W YCR051WP25631 222 aa14.18□□□□□ -0.14
RPN10YHR200W MRS6P32864 603 aaKnown RBP14.18□□□□□ -0.14
RPN10YHR200W YHL041WP38730 149 aa14.18□□□□□ -0.14
RPN10YHR200W ATM1P40416 690 aa14.18□□□□□ -0.14
RPN10YHR200W TAN1P53072 289 aaPredicted RBP14.18□□□□□ -0.14
RPN10YHR200W SLU7Q02775 382 aaKnown RBP14.18□□□□□ -0.14
RPN10YHR200W PIR3Q03180 325 aa14.18□□□□□ -0.14
RPN10YHR200W ADI1Q03677 179 aa14.18□□□□□ -0.14
RPN10YHR200W ECM38Q05902 660 aaPredicted RBP14.18□□□□□ -0.14
RPN10YHR200W SET3P36124 751 aa14.17□□□□□ -0.14
RPN10YHR200W KTR4P38131 464 aa14.17□□□□□ -0.14
RPN10YHR200W RRN7P40992 514 aa14.17□□□□□ -0.14
RPN10YHR200W LSB6P42951 607 aa14.17□□□□□ -0.14
RPN10YHR200W LSC1P53598 329 aaKnown RBP14.17□□□□□ -0.14
RPN10YHR200W SLT2Q00772 484 aa14.17□□□□□ -0.14
RPN10YHR200W MRS2Q01926 470 aa14.17□□□□□ -0.14
RPN10YHR200W NSE5Q03718 556 aa14.17□□□□□ -0.14
RPN10YHR200W FAR8Q05040 523 aa14.17□□□□□ -0.14
RPN10YHR200W YPQ1Q12010 308 aa14.17□□□□□ -0.14
RPN10YHR200W AFI1Q99222 893 aa14.17□□□□□ -0.14
RPN10YHR200W SRV2P17555 526 aaKnown RBP14.16□□□□□ -0.14
RPN10YHR200W PEX1P24004 1043 aa14.16□□□□□ -0.14
RPN10YHR200W PEX28P38848 579 aa14.16□□□□□ -0.14
RPN10YHR200W DLD2P46681 530 aaKnown RBP14.16□□□□□ -0.14
RPN10YHR200W SNG1P46950 547 aa14.16□□□□□ -0.14
RPN10YHR200W NRD1P53617 575 aaKnown RBP RIP-Chip data14.16□□□□□ -0.14not detected
RPN10YHR200W TOF2Q02208 771 aa14.16□□□□□ -0.14
RPN10YHR200W BSP1Q06604 576 aa14.16□□□□□ -0.14
RPN10YHR200W SWC7Q06707 132 aa14.16□□□□□ -0.14
RPN10YHR200W YLR012CQ07927 99 aa14.16□□□□□ -0.14
RPN10YHR200W PGC1Q08959 321 aa14.16□□□□□ -0.14
RPN10YHR200W CDC20P26309 610 aa14.15□□□□□ -0.14
RPN10YHR200W PMI40P29952 429 aaKnown RBP14.15□□□□□ -0.14
RPN10YHR200W SLD2P34252 453 aa14.15□□□□□ -0.14
RPN10YHR200W YMR160WQ03823 816 aa14.15□□□□□ -0.14
RPN10YHR200W APE1P14904 514 aa14.14□□□□□ -0.15
RPN10YHR200W PEX34P25584 144 aa14.14□□□□□ -0.15
RPN10YHR200W COQ8P27697 501 aa14.14□□□□□ -0.15
RPN10YHR200W SMI1P32566 505 aa14.14□□□□□ -0.15
RPN10YHR200W UTR2P32623 467 aa14.14□□□□□ -0.15
RPN10YHR200W AIM26P32858 118 aa14.14□□□□□ -0.15
RPN10YHR200W LOS1P33418 1100 aaPredicted RBP14.14□□□□□ -0.15
RPN10YHR200W YBP1P38315 674 aa14.14□□□□□ -0.15
RPN10YHR200W YIL161WP40449 235 aaKnown RBP14.14□□□□□ -0.15
RPN10YHR200W SIW14P53965 281 aa14.14□□□□□ -0.15
RPN10YHR200W RTN1Q04947 295 aaKnown RBP14.14□□□□□ -0.15
RPN10YHR200W LDB17Q12342 491 aa14.14□□□□□ -0.15
RPN10YHR200W TEF1P02994 458 aaKnown RBP14.13□□□□□ -0.15
RPN10YHR200W CDC10P25342 322 aaKnown RBP14.13□□□□□ -0.15
RPN10YHR200W GID7P25569 745 aa14.13□□□□□ -0.15
RPN10YHR200W YCL068CP25593 260 aa14.13□□□□□ -0.15
RPN10YHR200W MRPL40P36534 297 aa14.13□□□□□ -0.15
RPN10YHR200W MOB1P40484 314 aa14.13□□□□□ -0.15
RPN10YHR200W COQ6P53318 479 aa14.13□□□□□ -0.15
RPN10YHR200W CDC14Q00684 551 aa14.13□□□□□ -0.15
RPN10YHR200W RSC4Q02206 625 aa14.13□□□□□ -0.15
RPN10YHR200W ARP9Q05123 467 aa14.13□□□□□ -0.15
RPN10YHR200W LDB18Q07887 179 aa14.13□□□□□ -0.15
RPN10YHR200W ETR1P38071 380 aa14.12□□□□□ -0.15
RPN10YHR200W IST3P40565 148 aaPredicted RBP14.12□□□□□ -0.15
RPN10YHR200W SSC1P0CS90 654 aaKnown RBP14.11□□□□□ -0.15
RPN10YHR200W AMS1P22855 1083 aa14.11□□□□□ -0.15
RPN10YHR200W RIM1P32445 135 aaKnown RBP14.11□□□□□ -0.15
RPN10YHR200W ISF1P32488 338 aa14.11□□□□□ -0.15
RPN10YHR200W TGL4P36165 910 aa14.11□□□□□ -0.15
RPN10YHR200W SSP120P39931 234 aaKnown RBP14.11□□□□□ -0.15
RPN10YHR200W TRM112P53738 135 aaPredicted RBP14.11□□□□□ -0.15
RPN10YHR200W EFM6P53970 246 aa14.11□□□□□ -0.15
RPN10YHR200W YML119WQ03208 357 aa14.11□□□□□ -0.15
RPN10YHR200W YDR034W-BQ6Q5X2 51 aa14.11□□□□□ -0.15
RPN10YHR200W MET22P32179 357 aa14.1□□□□□ -0.15
RPN10YHR200W CRP1P38845 465 aaKnown RBP14.1□□□□□ -0.15
RPN10YHR200W ELO3P40319 345 aa14.1□□□□□ -0.15
RPN10YHR200W LIA1P47120 325 aaKnown RBP14.1□□□□□ -0.15
RPN10YHR200W LEE1Q02799 301 aaKnown RBP14.1□□□□□ -0.15
RPN10YHR200W YET3Q07451 203 aa14.1□□□□□ -0.15
RPN10YHR200W MIH1P23748 554 aa14.09□□□□□ -0.15
RPN10YHR200W KAR9P32526 644 aa14.09□□□□□ -0.15
RPN10YHR200W GGA2P38817 585 aaKnown RBP14.09□□□□□ -0.15
RPN10YHR200W LIN1P38852 340 aaPredicted RBP14.09□□□□□ -0.15
RPN10YHR200W UBP7P40453 1071 aa14.09□□□□□ -0.15
RPN10YHR200W OYE3P41816 400 aaPredicted RBP14.09□□□□□ -0.15
RPN10YHR200W TRF5P48561 642 aaKnown RBP14.09□□□□□ -0.15
RPN10YHR200W TDA5Q06417 326 aaKnown RBP14.09□□□□□ -0.15
RPN10YHR200W COX5AP00424 153 aa14.08□□□□□ -0.16
RPN10YHR200W PPH22P23595 377 aa14.08□□□□□ -0.16
RPN10YHR200W MAK5P38112 773 aaPredicted RBP14.08□□□□□ -0.16
RPN10YHR200W YTP1P53584 459 aa14.08□□□□□ -0.16
RPN10YHR200W HST2P53686 357 aa14.08□□□□□ -0.16
RPN10YHR200W YNR063WP53749 607 aa14.08□□□□□ -0.16
RPN10YHR200W NOP15P53927 220 aaPredicted RBP14.08□□□□□ -0.16
RPN10YHR200W YNL058CP53947 316 aa14.08□□□□□ -0.16
RPN10YHR200W YPL014WQ02606 381 aa14.08□□□□□ -0.16
RPN10YHR200W YLR053CQ12026 108 aa14.08□□□□□ -0.16
RPN10YHR200W YMR084WA2P2R3 262 aa14.07□□□□□ -0.16
Retrieved 100 of 5,963 RNA–protein pairs in 11.1 ms