RNA–Protein interactions for RNA: YHR135C

YCK1, Transcript of Palmitoylated plasma membrane-bound casein kinase I (CK1) isoform, yeastyeast

Gene YCK1, Length 1,617 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YCK1YHR135C RCL1Q08096 367 aaPredicted RBP6.33□□□□□ -1.4
YCK1YHR135C THI20Q08224 551 aa6.33□□□□□ -1.4
YCK1YHR135C NOB1Q08444 459 aaKnown RBP6.33□□□□□ -1.4
YCK1YHR135C DDC1Q08949 612 aa6.33□□□□□ -1.4
YCK1YHR135C YPR053CQ6Q5F3 151 aa6.33□□□□□ -1.4
YCK1YHR135C IZH4Q99393 312 aa6.33□□□□□ -1.4
YCK1YHR135C QCR6P00127 147 aa6.32□□□□□ -1.4
YCK1YHR135C GAL80P04387 435 aa6.32□□□□□ -1.4
YCK1YHR135C VMA3P25515 160 aa6.32□□□□□ -1.4
YCK1YHR135C FUB1P25659 250 aa6.32□□□□□ -1.4
YCK1YHR135C CDC20P26309 610 aa6.32□□□□□ -1.4
YCK1YHR135C PAH1P32567 862 aa6.32□□□□□ -1.4
YCK1YHR135C AIM26P32858 118 aa6.32□□□□□ -1.4
YCK1YHR135C MRPL7P36519 292 aa6.32□□□□□ -1.4
YCK1YHR135C LDH1P38139 375 aa6.32□□□□□ -1.4
YCK1YHR135C MSR1P38714 643 aa6.32□□□□□ -1.4
YCK1YHR135C SMF2P38778 549 aa6.32□□□□□ -1.4
YCK1YHR135C LYS9P38999 446 aa6.32□□□□□ -1.4
YCK1YHR135C ERP2P39704 215 aa6.32□□□□□ -1.4
YCK1YHR135C MRX1P40050 688 aa6.32□□□□□ -1.4
YCK1YHR135C SCC4P40090 624 aa6.32□□□□□ -1.4
YCK1YHR135C RRT5P43607 289 aa6.32□□□□□ -1.4
YCK1YHR135C YMR160WQ03823 816 aa6.32□□□□□ -1.4
YCK1YHR135C FMP25Q08023 583 aa6.32□□□□□ -1.4
YCK1YHR135C YPL225WQ08971 146 aaKnown RBP6.32□□□□□ -1.4
YCK1YHR135C AVL9Q12500 764 aa6.32□□□□□ -1.4
YCK1YHR135C PAB1P04147 577 aaKnown RBP RIP-Chip data6.32□□□□□ -1.4 RIP-Chip
YCK1YHR135C MRPL25P23369 157 aa6.32□□□□□ -1.4
YCK1YHR135C URA7P28274 579 aaKnown RBP6.32□□□□□ -1.4
YCK1YHR135C BUD2P33314 1104 aa6.32□□□□□ -1.4
YCK1YHR135C YBR056WP38081 501 aa6.32□□□□□ -1.4
YCK1YHR135C CKB2P38930 258 aa6.32□□□□□ -1.4
YCK1YHR135C ESL1P40456 1118 aa6.32□□□□□ -1.4
YCK1YHR135C TAH11P47112 604 aa6.32□□□□□ -1.4
YCK1YHR135C TEP1P53916 434 aa6.32□□□□□ -1.4
YCK1YHR135C KTR5P53966 522 aaPredicted RBP6.32□□□□□ -1.4
YCK1YHR135C SKY1Q03656 742 aa6.32□□□□□ -1.4
YCK1YHR135C TDA6Q06466 467 aa6.32□□□□□ -1.4
YCK1YHR135C ESC8Q08119 714 aa6.32□□□□□ -1.4
YCK1YHR135C YLL056CQ12177 298 aa6.32□□□□□ -1.4
YCK1YHR135C PKH2Q12236 1081 aaKnown RBP6.32□□□□□ -1.4
YCK1YHR135C YOL087CQ99247 1116 aa6.32□□□□□ -1.4
YCK1YHR135C YMR085WP0CF18 432 aa6.31□□□□□ -1.4
YCK1YHR135C YPK1P12688 680 aaKnown RBP6.31□□□□□ -1.4
YCK1YHR135C SLA2P33338 968 aa6.31□□□□□ -1.4
YCK1YHR135C LOS1P33418 1100 aaPredicted RBP6.31□□□□□ -1.4
YCK1YHR135C YBR032WP38223 100 aa6.31□□□□□ -1.4
YCK1YHR135C SHE3P38272 425 aaKnown RBP6.31□□□□□ -1.4
YCK1YHR135C DIA4P38705 446 aaPredicted RBP6.31□□□□□ -1.4
YCK1YHR135C SPC97P38863 823 aa6.31□□□□□ -1.4
YCK1YHR135C PRK1P40494 810 aa6.31□□□□□ -1.4
YCK1YHR135C UBX4P54730 416 aa6.31□□□□□ -1.4
YCK1YHR135C ADA2Q02336 434 aa6.31□□□□□ -1.4
YCK1YHR135C YML083CQ04526 418 aa6.31□□□□□ -1.4
YCK1YHR135C ADE13Q05911 482 aaKnown RBP6.31□□□□□ -1.4
YCK1YHR135C MAG2Q06436 670 aaKnown RBP6.31□□□□□ -1.4
YCK1YHR135C NBP2Q12163 236 aa6.31□□□□□ -1.4
YCK1YHR135C ILS1P09436 1072 aaKnown RBP6.3□□□□□ -1.4
YCK1YHR135C IMA3P0CW40 589 aa6.3□□□□□ -1.4
YCK1YHR135C IMA4P0CW41 589 aa6.3□□□□□ -1.4
YCK1YHR135C PRP16P15938 1071 aaPredicted RBP6.3□□□□□ -1.4
YCK1YHR135C CAD1P24813 409 aaKnown RBP6.3□□□□□ -1.4
YCK1YHR135C CDC10P25342 322 aaKnown RBP6.3□□□□□ -1.4
YCK1YHR135C ISC10P32645 267 aa6.3□□□□□ -1.4
YCK1YHR135C TKL2P33315 681 aa6.3□□□□□ -1.4
YCK1YHR135C KDX1P36005 433 aa6.3□□□□□ -1.4
YCK1YHR135C CDC1P40986 491 aa6.3□□□□□ -1.4
YCK1YHR135C TDA10P42938 290 aa6.3□□□□□ -1.4
YCK1YHR135C SAE2P46946 345 aa6.3□□□□□ -1.4
YCK1YHR135C YGR127WP53275 312 aa6.3□□□□□ -1.4
YCK1YHR135C KTR6P54070 446 aa6.3□□□□□ -1.4
YCK1YHR135C BUD22Q04347 519 aaKnown RBP6.3□□□□□ -1.4
YCK1YHR135C HRD3Q05787 833 aa6.3□□□□□ -1.4
YCK1YHR135C TDA5Q06417 326 aaKnown RBP6.3□□□□□ -1.4
YCK1YHR135C TPO1Q07824 586 aa6.3□□□□□ -1.4
YCK1YHR135C IMA2Q08295 589 aa6.3□□□□□ -1.4
YCK1YHR135C GPM2Q12008 311 aa6.3□□□□□ -1.4
YCK1YHR135C AI5_ALPHAQ9ZZX1 630 aa6.3□□□□□ -1.4
YCK1YHR135C VPS13Q07878 3144 aa6.3□□□□□ -1.4
YCK1YHR135C SSC1P0CS90 654 aaKnown RBP6.29□□□□□ -1.4
YCK1YHR135C BAS1P22035 811 aa6.29□□□□□ -1.4
YCK1YHR135C SQT1P35184 431 aa6.29□□□□□ -1.4
YCK1YHR135C YBR053CP38235 358 aa6.29□□□□□ -1.4
YCK1YHR135C SIF2P38262 535 aa6.29□□□□□ -1.4
YCK1YHR135C YSW1P38280 609 aa6.29□□□□□ -1.4
YCK1YHR135C OAF1P39720 1047 aaPredicted RBP6.29□□□□□ -1.4
YCK1YHR135C YFL012WP43580 148 aa6.29□□□□□ -1.4
YCK1YHR135C LSB3P43603 459 aaKnown RBP6.29□□□□□ -1.4
YCK1YHR135C RFX1P48743 811 aa6.29□□□□□ -1.4
YCK1YHR135C BIO4P53630 237 aa6.29□□□□□ -1.4
YCK1YHR135C YNL144CP53907 740 aa6.29□□□□□ -1.4
YCK1YHR135C YET3Q07451 203 aa6.29□□□□□ -1.4
YCK1YHR135C CIR2Q08822 631 aa6.29□□□□□ -1.4
YCK1YHR135C TAF10Q12030 206 aa6.29□□□□□ -1.4
YCK1YHR135C MET16P18408 261 aaPredicted RBP6.28□□□□□ -1.4
YCK1YHR135C ETR1P38071 380 aa6.28□□□□□ -1.4
YCK1YHR135C AIM18P38884 321 aa6.28□□□□□ -1.4
YCK1YHR135C STL1P39932 569 aa6.28□□□□□ -1.4
YCK1YHR135C GUF1P46943 645 aa6.28□□□□□ -1.4
YCK1YHR135C SPG3Q04398 127 aaPredicted RBP6.28□□□□□ -1.4
Retrieved 100 of 5,963 RNA–protein pairs in 9.4 ms