RNA–Protein interactions for RNA: YHR008C

SOD2, Transcript of Mitochondrial manganese superoxide dismutase, yeastyeast

Gene SOD2, Length 702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOD2YHR008C PAN6P40459 309 aa8.37□□□□□ -1.07
SOD2YHR008C CFD1P40558 293 aa8.37□□□□□ -1.07
SOD2YHR008C RTS3P53289 263 aa8.37□□□□□ -1.07
SOD2YHR008C YGR283CP53336 341 aaPredicted RBP8.37□□□□□ -1.07
SOD2YHR008C TEP1P53916 434 aa8.37□□□□□ -1.07
SOD2YHR008C YAP7Q08182 245 aa8.37□□□□□ -1.07
SOD2YHR008C YPK1P12688 680 aaKnown RBP8.36□□□□□ -1.07
SOD2YHR008C RED1P14291 827 aa8.36□□□□□ -1.07
SOD2YHR008C LDB16P25587 256 aa8.36□□□□□ -1.07
SOD2YHR008C ADY2P25613 283 aa8.36□□□□□ -1.07
SOD2YHR008C GYP6P32806 458 aa8.36□□□□□ -1.07
SOD2YHR008C YAL037WP39728 267 aa8.36□□□□□ -1.07
SOD2YHR008C SPC105P53148 917 aa8.36□□□□□ -1.07
SOD2YHR008C VHS1Q03785 461 aa8.36□□□□□ -1.07
SOD2YHR008C STP3Q05937 343 aa8.36□□□□□ -1.07
SOD2YHR008C DIC1Q06143 298 aa8.36□□□□□ -1.07
SOD2YHR008C YPL066WQ12194 479 aa8.36□□□□□ -1.07
SOD2YHR008C YOR338WQ99326 363 aa8.36□□□□□ -1.07
SOD2YHR008C BI2P03873 423 aa8.35□□□□□ -1.07
SOD2YHR008C PMA2P19657 947 aa8.35□□□□□ -1.07
SOD2YHR008C VMA4P22203 233 aaKnown RBP8.35□□□□□ -1.07
SOD2YHR008C SEC1P30619 724 aaKnown RBP8.35□□□□□ -1.07
SOD2YHR008C LRP1P38801 184 aaKnown RBP8.35□□□□□ -1.07
SOD2YHR008C RPL34BP40525 121 aaKnown RBP8.35□□□□□ -1.07
SOD2YHR008C DLD2P46681 530 aaKnown RBP8.35□□□□□ -1.07
SOD2YHR008C CTK3P46963 296 aaPredicted RBP8.35□□□□□ -1.07
SOD2YHR008C ASN2P49090 572 aaKnown RBP8.35□□□□□ -1.07
SOD2YHR008C TGL2P54857 326 aa8.35□□□□□ -1.07
SOD2YHR008C ARG7Q04728 441 aa8.35□□□□□ -1.07
SOD2YHR008C YPL272CQ08984 517 aa8.35□□□□□ -1.07
SOD2YHR008C VPS68Q12016 184 aa8.35□□□□□ -1.07
SOD2YHR008C MSL5Q12186 476 aaKnown RBP RIP-Chip data8.35□□□□□ -1.07not detected
SOD2YHR008C BI3Q9ZZW7 517 aa8.35□□□□□ -1.07
SOD2YHR008C EST1P17214 699 aaPredicted RBP8.34□□□□□ -1.07
SOD2YHR008C SCL1P21243 252 aaKnown RBP8.34□□□□□ -1.07
SOD2YHR008C SPR1P32603 445 aa8.34□□□□□ -1.07
SOD2YHR008C TAF14P35189 244 aa8.34□□□□□ -1.07
SOD2YHR008C ALY1P36117 915 aa8.34□□□□□ -1.07
SOD2YHR008C SMF1P38925 575 aa8.34□□□□□ -1.07
SOD2YHR008C CEM1P39525 442 aa8.34□□□□□ -1.07
SOD2YHR008C HXT16P47185 567 aa8.34□□□□□ -1.07
SOD2YHR008C PMT3P47190 753 aa8.34□□□□□ -1.07
SOD2YHR008C PCL10P53124 433 aa8.34□□□□□ -1.07
SOD2YHR008C HXT15P54854 567 aa8.34□□□□□ -1.07
SOD2YHR008C ENT2Q05785 613 aa8.34□□□□□ -1.07
SOD2YHR008C SPO75Q07798 868 aa8.34□□□□□ -1.07
SOD2YHR008C GUP2Q08929 609 aa8.34□□□□□ -1.07
SOD2YHR008C AFT2Q08957 416 aa8.34□□□□□ -1.07
SOD2YHR008C GLE1Q12315 538 aa8.34□□□□□ -1.07
SOD2YHR008C TUB1P09733 447 aaKnown RBP8.33□□□□□ -1.08
SOD2YHR008C AAT2P23542 418 aaKnown RBP8.33□□□□□ -1.08
SOD2YHR008C TRZ1P36159 838 aaPredicted RBP8.33□□□□□ -1.08
SOD2YHR008C MSR1P38714 643 aa8.33□□□□□ -1.08
SOD2YHR008C YHL041WP38730 149 aa8.33□□□□□ -1.08
SOD2YHR008C MKT1P40850 830 aaKnown RBP8.33□□□□□ -1.08
SOD2YHR008C ZIM17P42844 174 aa8.33□□□□□ -1.08
SOD2YHR008C SPG5P42933 373 aa8.33□□□□□ -1.08
SOD2YHR008C BIR1P47134 954 aa8.33□□□□□ -1.08
SOD2YHR008C EBS1Q03466 884 aaKnown RBP8.33□□□□□ -1.08
SOD2YHR008C SXM1Q04175 944 aaKnown RBP8.33□□□□□ -1.08
SOD2YHR008C SCH9P11792 824 aaKnown RBP8.32□□□□□ -1.08
SOD2YHR008C GLN4P13188 809 aaKnown RBP8.32□□□□□ -1.08
SOD2YHR008C RNQ1P25367 405 aa8.32□□□□□ -1.08
SOD2YHR008C LYP1P32487 611 aa8.32□□□□□ -1.08
SOD2YHR008C SMC1P32908 1225 aa8.32□□□□□ -1.08
SOD2YHR008C SRP72P38688 640 aaKnown RBP8.32□□□□□ -1.08
SOD2YHR008C PTC2P39966 464 aaKnown RBP8.32□□□□□ -1.08
SOD2YHR008C YPT11P48559 417 aa8.32□□□□□ -1.08
SOD2YHR008C ROM1P53046 1155 aa8.32□□□□□ -1.08
SOD2YHR008C YNL143CP53908 130 aa8.32□□□□□ -1.08
SOD2YHR008C INA17Q02888 182 aa8.32□□□□□ -1.08
SOD2YHR008C ELP3Q02908 557 aaKnown RBP8.32□□□□□ -1.08
SOD2YHR008C TRS23Q03784 219 aa8.32□□□□□ -1.08
SOD2YHR008C HBT1Q07653 1046 aaKnown RBP8.32□□□□□ -1.08
SOD2YHR008C YOR059CQ08448 450 aaKnown RBP8.32□□□□□ -1.08
SOD2YHR008C THI21Q08975 551 aa8.32□□□□□ -1.08
SOD2YHR008C AFI1Q99222 893 aa8.32□□□□□ -1.08
SOD2YHR008C YPR089WO13585 888 aa8.31□□□□□ -1.08
SOD2YHR008C RIM101P33400 625 aa8.31□□□□□ -1.08
SOD2YHR008C MPE1P35728 441 aaKnown RBP8.31□□□□□ -1.08
SOD2YHR008C SIP4P46954 829 aa8.31□□□□□ -1.08
SOD2YHR008C YJL132WP47014 750 aa8.31□□□□□ -1.08
SOD2YHR008C SWC4P53201 476 aa8.31□□□□□ -1.08
SOD2YHR008C ELP4Q02884 456 aaKnown RBP8.31□□□□□ -1.08
SOD2YHR008C HRQ1Q05549 1077 aa8.31□□□□□ -1.08
SOD2YHR008C PLB3Q08108 686 aa8.31□□□□□ -1.08
SOD2YHR008C RRP6Q12149 733 aaKnown RBP8.31□□□□□ -1.08
SOD2YHR008C DDP1Q99321 188 aaKnown RBP8.31□□□□□ -1.08
SOD2YHR008C MPH2P0CD99 609 aa8.3□□□□□ -1.08
SOD2YHR008C TDA3P38758 523 aa8.3□□□□□ -1.08
SOD2YHR008C YEL028WP39989 153 aa8.3□□□□□ -1.08
SOD2YHR008C YIL054WP40524 105 aa8.3□□□□□ -1.08
SOD2YHR008C TCB2P48231 1178 aa8.3□□□□□ -1.08
SOD2YHR008C YNL108CP53929 270 aa8.3□□□□□ -1.08
SOD2YHR008C RKM2Q03942 479 aa8.3□□□□□ -1.08
SOD2YHR008C SIZ1Q04195 904 aa8.3□□□□□ -1.08
SOD2YHR008C CMS1Q07897 291 aaKnown RBP8.3□□□□□ -1.08
SOD2YHR008C TMS1Q12116 473 aa8.3□□□□□ -1.08
SOD2YHR008C GPM3Q12326 303 aa8.3□□□□□ -1.08
SOD2YHR008C YDR262WQ12331 272 aa8.3□□□□□ -1.08
Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms