RNA–Protein interactions for RNA: YGL220W

FRA2, Transcript of Protein involved in negative regulation of iron regulon transcription, yeast

Gene FRA2, Length 363 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FRA2	YGL220W	RIC1	P40395	1056 aa		4.94	□□□□□ -1.62
FRA2	YGL220W	IRC6	P43615	237 aa		4.94	□□□□□ -1.62
FRA2	YGL220W	RAI1	P53063	387 aa	Known RBP	4.94	□□□□□ -1.62
FRA2	YGL220W	BRE5	P53741	515 aa	Known RBP	4.94	□□□□□ -1.62
FRA2	YGL220W	ARP4	P80428	489 aa		4.94	□□□□□ -1.62
FRA2	YGL220W	YKU80	Q04437	629 aa		4.94	□□□□□ -1.62
FRA2	YGL220W	PSK2	Q08217	1101 aa		4.94	□□□□□ -1.62
FRA2	YGL220W	TRM8	Q12009	286 aa		4.94	□□□□□ -1.62
FRA2	YGL220W	YOR111W	Q99210	232 aa		4.94	□□□□□ -1.62
FRA2	YGL220W	RPS17A	P02407	136 aa	Known RBP	4.93	□□□□□ -1.62
FRA2	YGL220W	RPS17B	P14127	136 aa	Known RBP	4.93	□□□□□ -1.62
FRA2	YGL220W	POL3	P15436	1097 aa		4.93	□□□□□ -1.62
FRA2	YGL220W	GUK1	P15454	187 aa	Known RBP	4.93	□□□□□ -1.62
FRA2	YGL220W	SRP54	P20424	541 aa	Known RBP	4.93	□□□□□ -1.62
FRA2	YGL220W	RNR3	P21672	869 aa	Known RBP	4.93	□□□□□ -1.62
FRA2	YGL220W	MF(ALPHA)2	P32435	120 aa		4.93	□□□□□ -1.62
FRA2	YGL220W	RPD3	P32561	433 aa		4.93	□□□□□ -1.62
FRA2	YGL220W	ELM1	P32801	640 aa		4.93	□□□□□ -1.62
FRA2	YGL220W	NPL6	P32832	435 aa		4.93	□□□□□ -1.62
FRA2	YGL220W	RGT1	P32862	1170 aa		4.93	□□□□□ -1.62
FRA2	YGL220W	NOP4	P37838	685 aa	Known RBP	4.93	□□□□□ -1.62
FRA2	YGL220W	NPR3	P38742	1146 aa		4.93	□□□□□ -1.62
FRA2	YGL220W	MIP6	P38760	659 aa	Known RBP	4.93	□□□□□ -1.62
FRA2	YGL220W	TOM71	P38825	639 aa	Known RBP	4.93	□□□□□ -1.62
FRA2	YGL220W	NDT80	P38830	627 aa		4.93	□□□□□ -1.62
FRA2	YGL220W	YER010C	P40011	234 aa		4.93	□□□□□ -1.62
FRA2	YGL220W	YIL108W	P40483	696 aa	Known RBP	4.93	□□□□□ -1.62
FRA2	YGL220W	SPO22	P40511	975 aa		4.93	□□□□□ -1.62
FRA2	YGL220W	ALT1	P52893	592 aa		4.93	□□□□□ -1.62
FRA2	YGL220W	SDH1	Q00711	640 aa		4.93	□□□□□ -1.62
FRA2	YGL220W	SLD5	Q03406	294 aa		4.93	□□□□□ -1.62
FRA2	YGL220W	TAF11	Q04226	346 aa		4.93	□□□□□ -1.62
FRA2	YGL220W	MYO5	Q04439	1219 aa	Known RBP	4.93	□□□□□ -1.62
FRA2	YGL220W	IWR1	Q07532	353 aa	Predicted RBP	4.93	□□□□□ -1.62
FRA2	YGL220W	HAL9	Q12180	1030 aa		4.93	□□□□□ -1.62
FRA2	YGL220W	SVS1	Q12254	260 aa		4.93	□□□□□ -1.62
FRA2	YGL220W	YLR122C	Q12312	125 aa		4.93	□□□□□ -1.62
FRA2	YGL220W	SMC6	Q12749	1114 aa		4.93	□□□□□ -1.62
FRA2	YGL220W	ECM29	P38737	1868 aa		4.92	□□□□□ -1.62
FRA2	YGL220W	TRP3	P00937	484 aa		4.92	□□□□□ -1.62
FRA2	YGL220W	RNR2	P09938	399 aa	Known RBP	4.92	□□□□□ -1.62
FRA2	YGL220W	MET8	P15807	274 aa		4.92	□□□□□ -1.62
FRA2	YGL220W	ACO1	P19414	778 aa	Known RBP RIP-Chip data	4.92	□□□□□ -1.62	not detected
FRA2	YGL220W	SRO9	P25567	434 aa	Known RBP	4.92	□□□□□ -1.62
FRA2	YGL220W	RAD16	P31244	790 aa		4.92	□□□□□ -1.62
FRA2	YGL220W	VPH1	P32563	840 aa	Known RBP	4.92	□□□□□ -1.62
FRA2	YGL220W	SAS3	P34218	831 aa		4.92	□□□□□ -1.62
FRA2	YGL220W	STT3	P39007	718 aa	Known RBP	4.92	□□□□□ -1.62
FRA2	YGL220W	AKR1	P39010	764 aa		4.92	□□□□□ -1.62
FRA2	YGL220W	KHA1	P40309	873 aa		4.92	□□□□□ -1.62
FRA2	YGL220W	EPL1	P43572	832 aa		4.92	□□□□□ -1.62
FRA2	YGL220W	CTF18	P49956	741 aa		4.92	□□□□□ -1.62
FRA2	YGL220W	FMS1	P50264	508 aa		4.92	□□□□□ -1.62
FRA2	YGL220W	YML6	P51998	286 aa		4.92	□□□□□ -1.62
FRA2	YGL220W	EXG2	P52911	562 aa		4.92	□□□□□ -1.62
FRA2	YGL220W	ORC4	P54791	529 aa		4.92	□□□□□ -1.62
FRA2	YGL220W	TRI1	Q05024	226 aa		4.92	□□□□□ -1.62
FRA2	YGL220W	SPH1	Q06160	661 aa		4.92	□□□□□ -1.62
FRA2	YGL220W	CSR1	Q06705	408 aa	Known RBP	4.92	□□□□□ -1.62
FRA2	YGL220W	MYO1	P08964	1928 aa		4.91	□□□□□ -1.62
FRA2	YGL220W	SES1	P07284	462 aa	Known RBP	4.91	□□□□□ -1.62
FRA2	YGL220W	SIR1	P21691	654 aa		4.91	□□□□□ -1.62
FRA2	YGL220W	RSC6	P25632	483 aa		4.91	□□□□□ -1.62
FRA2	YGL220W	PUB1	P32588	453 aa	Known RBP RIP-Chip data	4.91	□□□□□ -1.62	not detected
FRA2	YGL220W	TEF4	P36008	412 aa	Known RBP	4.91	□□□□□ -1.62
FRA2	YGL220W	MCR1	P36060	302 aa	Known RBP	4.91	□□□□□ -1.62
FRA2	YGL220W	IFA38	P38286	347 aa		4.91	□□□□□ -1.62
FRA2	YGL220W	SRP72	P38688	640 aa	Known RBP	4.91	□□□□□ -1.62
FRA2	YGL220W	YHL012W	P38709	493 aa		4.91	□□□□□ -1.62
FRA2	YGL220W	YLF2	P38746	405 aa		4.91	□□□□□ -1.62
FRA2	YGL220W	CAJ1	P39101	391 aa		4.91	□□□□□ -1.62
FRA2	YGL220W	IMA5	P40884	581 aa		4.91	□□□□□ -1.62
FRA2	YGL220W	MAD2	P40958	196 aa		4.91	□□□□□ -1.62
FRA2	YGL220W	SET2	P46995	733 aa	Known RBP	4.91	□□□□□ -1.62
FRA2	YGL220W	LIF1	P53150	421 aa		4.91	□□□□□ -1.62
FRA2	YGL220W	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	4.91	□□□□□ -1.62	not detected
FRA2	YGL220W	LEE1	Q02799	301 aa	Known RBP	4.91	□□□□□ -1.62
FRA2	YGL220W	YDR341C	Q05506	607 aa	Known RBP	4.91	□□□□□ -1.62
FRA2	YGL220W	XYL2	Q07993	356 aa		4.91	□□□□□ -1.62
FRA2	YGL220W	DSE3	Q08729	430 aa		4.91	□□□□□ -1.62
FRA2	YGL220W	DIN7	Q12086	430 aa		4.91	□□□□□ -1.62
FRA2	YGL220W	RTK1	Q12100	620 aa	Predicted RBP	4.91	□□□□□ -1.62
FRA2	YGL220W	SFI1	Q12369	946 aa		4.91	□□□□□ -1.62
FRA2	YGL220W	DBF4	P32325	704 aa		4.9	□□□□□ -1.63
FRA2	YGL220W	ECM32	P32644	1121 aa	Known RBP	4.9	□□□□□ -1.63
FRA2	YGL220W	LRG1	P35688	1017 aa		4.9	□□□□□ -1.63
FRA2	YGL220W	UIP5	P36137	443 aa		4.9	□□□□□ -1.63
FRA2	YGL220W	APN2	P38207	520 aa		4.9	□□□□□ -1.63
FRA2	YGL220W	REG2	P38232	338 aa		4.9	□□□□□ -1.63
FRA2	YGL220W	TPA1	P40032	644 aa	Known RBP	4.9	□□□□□ -1.63
FRA2	YGL220W	PRM2	P40534	656 aa		4.9	□□□□□ -1.63
FRA2	YGL220W	ARF3	P40994	183 aa	RIP-Chip data	4.9	□□□□□ -1.63	not detected
FRA2	YGL220W	SSY5	P47002	699 aa		4.9	□□□□□ -1.63
FRA2	YGL220W	MTR3	P48240	250 aa	Predicted RBP	4.9	□□□□□ -1.63
FRA2	YGL220W	SNO4	Q04902	237 aa		4.9	□□□□□ -1.63
FRA2	YGL220W	UTP21	Q06078	939 aa	Predicted RBP	4.9	□□□□□ -1.63
FRA2	YGL220W	SMD2	Q06217	110 aa	Known RBP	4.9	□□□□□ -1.63
FRA2	YGL220W	HSP33	Q08914	237 aa	Known RBP	4.9	□□□□□ -1.63
FRA2	YGL220W	HSP32	Q08992	237 aa		4.9	□□□□□ -1.63
FRA2	YGL220W	SUT2	Q12286	268 aa		4.9	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 28.3 ms