RNA–Protein interactions for RNA: YDR378C

LSM6, Transcript of Lsm (Like Sm) protein, yeastyeast

Gene LSM6, Length 261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSM6YDR378C TRS130Q03660 1102 aa5.59□□□□□ -1.51
LSM6YDR378C ECM16Q04217 1267 aaKnown RBP5.59□□□□□ -1.51
LSM6YDR378C SLK19Q08581 821 aaKnown RBP5.59□□□□□ -1.51
LSM6YDR378C SUT2Q12286 268 aa5.59□□□□□ -1.51
LSM6YDR378C ADE5,7P07244 802 aaKnown RBP5.58□□□□□ -1.52
LSM6YDR378C PET122P10355 254 aa5.58□□□□□ -1.52
LSM6YDR378C BIK1P11709 440 aa5.58□□□□□ -1.52
LSM6YDR378C NCP1P16603 691 aaKnown RBP5.58□□□□□ -1.52
LSM6YDR378C MAM1P40065 302 aa5.58□□□□□ -1.52
LSM6YDR378C ARC35P53731 342 aaKnown RBP5.58□□□□□ -1.52
LSM6YDR378C WAR1Q03631 944 aa5.58□□□□□ -1.52
LSM6YDR378C ULA1Q12059 462 aa5.58□□□□□ -1.52
LSM6YDR378C PPZ2P33329 710 aa5.57□□□□□ -1.52
LSM6YDR378C PSY4P38193 441 aa5.57□□□□□ -1.52
LSM6YDR378C EXO84P38261 753 aa5.57□□□□□ -1.52
LSM6YDR378C PAC2P39937 518 aa5.57□□□□□ -1.52
LSM6YDR378C ARG7Q04728 441 aa5.57□□□□□ -1.52
LSM6YDR378C MRN1Q08925 612 aaKnown RBP RIP-Chip data5.57□□□□□ -1.52not detected
LSM6YDR378C YMR084WA2P2R3 262 aa5.56□□□□□ -1.52
LSM6YDR378C RPL7AP05737 244 aaKnown RBP5.56□□□□□ -1.52
LSM6YDR378C MTF2P10849 440 aa5.56□□□□□ -1.52
LSM6YDR378C PMA2P19657 947 aa5.56□□□□□ -1.52
LSM6YDR378C UBC1P21734 215 aaKnown RBP5.56□□□□□ -1.52
LSM6YDR378C PDE1P22434 369 aa5.56□□□□□ -1.52
LSM6YDR378C YMC1P32331 307 aa5.56□□□□□ -1.52
LSM6YDR378C BEM3P32873 1128 aa5.56□□□□□ -1.52
LSM6YDR378C ARO9P38840 513 aaPredicted RBP5.56□□□□□ -1.52
LSM6YDR378C OPT1P40897 799 aa5.56□□□□□ -1.52
LSM6YDR378C BST1P43571 1029 aa5.56□□□□□ -1.52
LSM6YDR378C UBP16Q02863 499 aa5.56□□□□□ -1.52
LSM6YDR378C RPL7BQ12213 244 aaKnown RBP5.56□□□□□ -1.52
LSM6YDR378C SUL2Q12325 893 aa5.56□□□□□ -1.52
LSM6YDR378C AHA1Q12449 350 aaKnown RBP5.56□□□□□ -1.52
LSM6YDR378C PFK2P16862 959 aaKnown RBP RIP-Chip data5.55□□□□□ -1.52not detected
LSM6YDR378C ILV6P25605 309 aaKnown RBP5.55□□□□□ -1.52
LSM6YDR378C AAD3P25612 363 aa5.55□□□□□ -1.52
LSM6YDR378C ADY2P25613 283 aa5.55□□□□□ -1.52
LSM6YDR378C RAD16P31244 790 aa5.55□□□□□ -1.52
LSM6YDR378C UME6P39001 836 aa5.55□□□□□ -1.52
LSM6YDR378C RAD26P40352 1085 aa5.55□□□□□ -1.52
LSM6YDR378C ZAP1P47043 880 aa5.55□□□□□ -1.52
LSM6YDR378C COG2P53271 262 aa5.55□□□□□ -1.52
LSM6YDR378C GTR1Q00582 310 aa5.55□□□□□ -1.52
LSM6YDR378C YBR255C-AQ3E776 120 aa5.55□□□□□ -1.52
LSM6YDR378C CHO2P05374 869 aaKnown RBP5.54□□□□□ -1.52
LSM6YDR378C HEM1P09950 548 aaPredicted RBP5.54□□□□□ -1.52
LSM6YDR378C KGD2P19262 463 aaPredicted RBP5.54□□□□□ -1.52
LSM6YDR378C SIP1P32578 815 aa5.54□□□□□ -1.52
LSM6YDR378C NUP120P35729 1037 aa5.54□□□□□ -1.52
LSM6YDR378C YFL015CP43578 164 aa5.54□□□□□ -1.52
LSM6YDR378C YNL092WP53934 400 aa5.54□□□□□ -1.52
LSM6YDR378C AAT1Q01802 451 aa5.54□□□□□ -1.52
LSM6YDR378C FMP30Q02883 468 aa5.54□□□□□ -1.52
LSM6YDR378C YML131WQ03102 365 aa5.54□□□□□ -1.52
LSM6YDR378C YML119WQ03208 357 aa5.54□□□□□ -1.52
LSM6YDR378C RVB2Q12464 471 aaKnown RBP5.54□□□□□ -1.52
LSM6YDR378C AMD2P22580 549 aa5.53□□□□□ -1.52
LSM6YDR378C GDA1P32621 518 aa5.53□□□□□ -1.52
LSM6YDR378C RPF2P36160 344 aaKnown RBP5.53□□□□□ -1.52
LSM6YDR378C MTG1Q03151 367 aaPredicted RBP5.53□□□□□ -1.52
LSM6YDR378C CSR1Q06705 408 aaKnown RBP5.53□□□□□ -1.52
LSM6YDR378C YDL242WQ07746 117 aa5.53□□□□□ -1.52
LSM6YDR378C PNO1Q99216 274 aaKnown RBP5.53□□□□□ -1.52
LSM6YDR378C TPK1P06244 397 aa5.52□□□□□ -1.53
LSM6YDR378C TUB1P09733 447 aaKnown RBP5.52□□□□□ -1.53
LSM6YDR378C SSH4P32343 579 aa5.52□□□□□ -1.53
LSM6YDR378C RPC34P32910 317 aa5.52□□□□□ -1.53
LSM6YDR378C KAP123P40069 1113 aaKnown RBP5.52□□□□□ -1.53
LSM6YDR378C YML053CQ04978 212 aa5.52□□□□□ -1.53
LSM6YDR378C ARO10Q06408 635 aa5.52□□□□□ -1.53
LSM6YDR378C PCL8Q08966 492 aa5.52□□□□□ -1.53
LSM6YDR378C COX17Q12287 69 aa5.52□□□□□ -1.53
LSM6YDR378C LEU2P04173 364 aaPredicted RBP5.51□□□□□ -1.53
LSM6YDR378C URK1P27515 501 aa5.51□□□□□ -1.53
LSM6YDR378C RPT3P33298 428 aaKnown RBP5.51□□□□□ -1.53
LSM6YDR378C SLC1P33333 303 aa5.51□□□□□ -1.53
LSM6YDR378C IFA38P38286 347 aa5.51□□□□□ -1.53
LSM6YDR378C RIX1P38883 763 aaPredicted RBP5.51□□□□□ -1.53
LSM6YDR378C FUN12P39730 1002 aaKnown RBP5.51□□□□□ -1.53
LSM6YDR378C YJL043WP47053 257 aa5.51□□□□□ -1.53
LSM6YDR378C SUB1P54000 292 aaKnown RBP5.51□□□□□ -1.53
LSM6YDR378C RAD33Q04231 177 aa5.51□□□□□ -1.53
LSM6YDR378C TEF4P36008 412 aaKnown RBP5.5□□□□□ -1.53
LSM6YDR378C VPS8P39702 1274 aa5.5□□□□□ -1.53
LSM6YDR378C EXO1P39875 702 aa5.5□□□□□ -1.53
LSM6YDR378C CTF18P49956 741 aa5.5□□□□□ -1.53
LSM6YDR378C TAM41P53230 385 aa5.5□□□□□ -1.53
LSM6YDR378C YNL058CP53947 316 aa5.5□□□□□ -1.53
LSM6YDR378C PLM2Q04383 521 aa5.5□□□□□ -1.53
LSM6YDR378C LCB4Q12246 624 aa5.5□□□□□ -1.53
LSM6YDR378C SEC3P33332 1336 aaKnown RBP5.49□□□□□ -1.53
LSM6YDR378C ATP2P00830 511 aaKnown RBP5.49□□□□□ -1.53
LSM6YDR378C RER1P25560 188 aa5.49□□□□□ -1.53
LSM6YDR378C SAP1P39955 897 aaKnown RBP5.49□□□□□ -1.53
LSM6YDR378C YIL161WP40449 235 aaKnown RBP5.49□□□□□ -1.53
LSM6YDR378C TDA10P42938 290 aa5.49□□□□□ -1.53
LSM6YDR378C UBX6P47049 396 aa5.49□□□□□ -1.53
LSM6YDR378C IMO32P53219 342 aa5.49□□□□□ -1.53
LSM6YDR378C GTB1Q04924 702 aa5.49□□□□□ -1.53
LSM6YDR378C MRI1Q06489 411 aaKnown RBP5.49□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 21.4 ms