RNA–Protein interactions for RNA: YDR311W

TFB1, Transcript of Subunit of TFIIH and nucleotide excision repair factor 3 complexes, yeast

Gene TFB1, Length 1,929 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TFB1	YDR311W	VPS33	P20795	691 aa		3.07	□□□□□ -1.92
TFB1	YDR311W	ERG8	P24521	451 aa		3.07	□□□□□ -1.92
TFB1	YDR311W	ROX1	P25042	368 aa		3.07	□□□□□ -1.92
TFB1	YDR311W	NPL6	P32832	435 aa		3.07	□□□□□ -1.92
TFB1	YDR311W	BCS1	P32839	456 aa		3.07	□□□□□ -1.92
TFB1	YDR311W	PXA2	P34230	853 aa		3.07	□□□□□ -1.92
TFB1	YDR311W	PEX5	P35056	612 aa		3.07	□□□□□ -1.92
TFB1	YDR311W	PLB1	P39105	664 aa		3.07	□□□□□ -1.92
TFB1	YDR311W	YEL025C	P39991	1188 aa		3.07	□□□□□ -1.92
TFB1	YDR311W	LRO1	P40345	661 aa		3.07	□□□□□ -1.92
TFB1	YDR311W	IST3	P40565	148 aa	Predicted RBP	3.07	□□□□□ -1.92
TFB1	YDR311W	CIR1	P42940	261 aa		3.07	□□□□□ -1.92
TFB1	YDR311W	CSL4	P53859	292 aa	Predicted RBP	3.07	□□□□□ -1.92
TFB1	YDR311W	ERG5	P54781	538 aa		3.07	□□□□□ -1.92
TFB1	YDR311W	FDC1	Q03034	503 aa		3.07	□□□□□ -1.92
TFB1	YDR311W	HOF1	Q05080	669 aa		3.07	□□□□□ -1.92
TFB1	YDR311W	PSR1	Q07800	427 aa		3.07	□□□□□ -1.92
TFB1	YDR311W	NOP12	Q08208	459 aa	Known RBP	3.07	□□□□□ -1.92
TFB1	YDR311W	TMA16	Q08687	178 aa		3.07	□□□□□ -1.92
TFB1	YDR311W	HUA2	Q12134	243 aa		3.07	□□□□□ -1.92
TFB1	YDR311W	SMC6	Q12749	1114 aa		3.07	□□□□□ -1.92
TFB1	YDR311W	GCN4	P03069	281 aa		3.06	□□□□□ -1.92
TFB1	YDR311W	RPS13	P05756	151 aa	Known RBP	3.06	□□□□□ -1.92
TFB1	YDR311W	MSS1	P32559	526 aa	Predicted RBP	3.06	□□□□□ -1.92
TFB1	YDR311W	APE4	P38821	490 aa		3.06	□□□□□ -1.92
TFB1	YDR311W	NUP60	P39705	539 aa		3.06	□□□□□ -1.92
TFB1	YDR311W	SPO22	P40511	975 aa		3.06	□□□□□ -1.92
TFB1	YDR311W	BAP3	P41815	604 aa		3.06	□□□□□ -1.92
TFB1	YDR311W	ARC1	P46672	376 aa	Known RBP	3.06	□□□□□ -1.92
TFB1	YDR311W	YDR132C	Q03900	495 aa		3.06	□□□□□ -1.92
TFB1	YDR311W	ARP9	Q05123	467 aa		3.06	□□□□□ -1.92
TFB1	YDR311W	LAS17	Q12446	633 aa		3.06	□□□□□ -1.92
TFB1	YDR311W	YBR126W-A	Q8TGU7	68 aa		3.06	□□□□□ -1.92
TFB1	YDR311W	PNO1	Q99216	274 aa	Known RBP	3.06	□□□□□ -1.92
TFB1	YDR311W	RPP2A	P05319	106 aa	Known RBP	3.05	□□□□□ -1.92
TFB1	YDR311W	SEC53	P07283	254 aa	Known RBP	3.05	□□□□□ -1.92
TFB1	YDR311W	SEC12	P11655	471 aa		3.05	□□□□□ -1.92
TFB1	YDR311W	KAR3	P17119	729 aa		3.05	□□□□□ -1.92
TFB1	YDR311W	CAD1	P24813	409 aa	Known RBP	3.05	□□□□□ -1.92
TFB1	YDR311W	EFT1	P32324	842 aa	Known RBP	3.05	□□□□□ -1.92
TFB1	YDR311W	VPH1	P32563	840 aa	Known RBP	3.05	□□□□□ -1.92
TFB1	YDR311W	GEX2	P36173	615 aa		3.05	□□□□□ -1.92
TFB1	YDR311W	LRP1	P38801	184 aa	Known RBP	3.05	□□□□□ -1.92
TFB1	YDR311W	YJL193W	P39542	402 aa		3.05	□□□□□ -1.92
TFB1	YDR311W	GIP4	P39732	760 aa		3.05	□□□□□ -1.92
TFB1	YDR311W	LTP1	P40347	161 aa		3.05	□□□□□ -1.92
TFB1	YDR311W	YGR054W	P53235	642 aa	Known RBP	3.05	□□□□□ -1.92
TFB1	YDR311W	YNR061C	P53747	219 aa		3.05	□□□□□ -1.92
TFB1	YDR311W	RPT6	Q01939	405 aa	Known RBP	3.05	□□□□□ -1.92
TFB1	YDR311W	FCP1	Q03254	732 aa		3.05	□□□□□ -1.92
TFB1	YDR311W	RCO1	Q04779	684 aa		3.05	□□□□□ -1.92
TFB1	YDR311W	IRC3	Q06683	689 aa		3.05	□□□□□ -1.92
TFB1	YDR311W	RXT3	Q07458	294 aa		3.05	□□□□□ -1.92
TFB1	YDR311W	YOR352W	Q08816	343 aa		3.05	□□□□□ -1.92
TFB1	YDR311W	CTI6	Q08923	506 aa		3.05	□□□□□ -1.92
TFB1	YDR311W	NBP2	Q12163	236 aa		3.05	□□□□□ -1.92
TFB1	YDR311W	RTN2	Q12443	393 aa		3.05	□□□□□ -1.92
TFB1	YDR311W	HSP82	P02829	709 aa	Known RBP	3.05	□□□□□ -1.92
TFB1	YDR311W	PDX1	P16451	410 aa		3.05	□□□□□ -1.92
TFB1	YDR311W	CDC20	P26309	610 aa		3.05	□□□□□ -1.92
TFB1	YDR311W	DPH2	P32461	534 aa		3.05	□□□□□ -1.92
TFB1	YDR311W	TOD6	P34219	525 aa		3.05	□□□□□ -1.92
TFB1	YDR311W	SRP72	P38688	640 aa	Known RBP	3.05	□□□□□ -1.92
TFB1	YDR311W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	3.05	□□□□□ -1.92	not detected
TFB1	YDR311W	ARF3	P40994	183 aa	RIP-Chip data	3.05	□□□□□ -1.92	RIP-Chip
TFB1	YDR311W	YML6	P51998	286 aa		3.05	□□□□□ -1.92
TFB1	YDR311W	MEH1	Q02205	184 aa		3.05	□□□□□ -1.92
TFB1	YDR311W	YPL108W	Q02872	168 aa	Predicted RBP	3.05	□□□□□ -1.92
TFB1	YDR311W	RCF1	Q03713	159 aa		3.05	□□□□□ -1.92
TFB1	YDR311W	ACK1	Q07622	623 aa	Predicted RBP	3.05	□□□□□ -1.92
TFB1	YDR311W	NMD4	Q12129	218 aa		3.05	□□□□□ -1.92
TFB1	YDR311W	VCX1	Q99385	411 aa		3.05	□□□□□ -1.92
TFB1	YDR311W	ILS1	P09436	1072 aa	Known RBP	3.04	□□□□□ -1.92
TFB1	YDR311W	PEP3	P27801	918 aa		3.04	□□□□□ -1.92
TFB1	YDR311W	DSS4	P32601	143 aa		3.04	□□□□□ -1.92
TFB1	YDR311W	ORC2	P32833	620 aa		3.04	□□□□□ -1.92
TFB1	YDR311W	ALY1	P36117	915 aa		3.04	□□□□□ -1.92
TFB1	YDR311W	SRO77	P38163	1010 aa		3.04	□□□□□ -1.92
TFB1	YDR311W	PIL1	P53252	339 aa	Known RBP	3.04	□□□□□ -1.92
TFB1	YDR311W	INN1	P53901	409 aa		3.04	□□□□□ -1.92
TFB1	YDR311W	GCN5	Q03330	439 aa		3.04	□□□□□ -1.92
TFB1	YDR311W	YDR131C	Q03899	556 aa		3.04	□□□□□ -1.92
TFB1	YDR311W	CRF1	Q04930	467 aa		3.04	□□□□□ -1.92
TFB1	YDR311W	YLR224W	Q05947	369 aa		3.04	□□□□□ -1.92
TFB1	YDR311W	PSK2	Q08217	1101 aa		3.04	□□□□□ -1.92
TFB1	YDR311W	CHS5	Q12114	671 aa	Known RBP	3.04	□□□□□ -1.92
TFB1	YDR311W	HIF1	Q12373	385 aa		3.04	□□□□□ -1.92
TFB1	YDR311W	YOL159C-A	Q3E769	90 aa		3.04	□□□□□ -1.92
TFB1	YDR311W	CET1	O13297	549 aa	Predicted RBP	3.03	□□□□□ -1.92
TFB1	YDR311W	LAT1	P12695	482 aa	Known RBP	3.03	□□□□□ -1.92
TFB1	YDR311W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	3.03	□□□□□ -1.92	not detected
TFB1	YDR311W	CDC60	P26637	1090 aa	Known RBP	3.03	□□□□□ -1.92
TFB1	YDR311W	URK1	P27515	501 aa		3.03	□□□□□ -1.92
TFB1	YDR311W	UBP13	P38187	747 aa		3.03	□□□□□ -1.92
TFB1	YDR311W	YBL029W	P38201	376 aa		3.03	□□□□□ -1.92
TFB1	YDR311W	YBR053C	P38235	358 aa		3.03	□□□□□ -1.92
TFB1	YDR311W	YEL057C	P39983	233 aa		3.03	□□□□□ -1.92
TFB1	YDR311W	BUD16	P39988	312 aa		3.03	□□□□□ -1.92
TFB1	YDR311W	JHD1	P40034	492 aa		3.03	□□□□□ -1.92
TFB1	YDR311W	IDS2	P46958	469 aa		3.03	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 62.1 ms