RNA–Protein interactions for RNA: YDL139C

SCM3, Transcript of Nonhistone component of centromeric chromatin, yeastyeast

Gene SCM3, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCM3YDL139C BTN2P53286 410 aa5.41□□□□□ -1.54
SCM3YDL139C ZPR1P53303 486 aaKnown RBP5.41□□□□□ -1.54
SCM3YDL139C CNM67P53865 581 aaKnown RBP5.41□□□□□ -1.54
SCM3YDL139C TFB2Q02939 513 aa5.41□□□□□ -1.54
SCM3YDL139C RBA50Q04418 439 aa5.41□□□□□ -1.54
SCM3YDL139C CDD1Q06549 142 aa5.41□□□□□ -1.54
SCM3YDL139C SHS1Q07657 551 aa5.41□□□□□ -1.54
SCM3YDL139C ESC8Q08119 714 aa5.41□□□□□ -1.54
SCM3YDL139C RIB2Q12362 591 aaKnown RBP5.41□□□□□ -1.54
SCM3YDL139C BI2P03873 423 aa5.4□□□□□ -1.54
SCM3YDL139C KAR3P17119 729 aa5.4□□□□□ -1.54
SCM3YDL139C EFT1P32324 842 aaKnown RBP5.4□□□□□ -1.54
SCM3YDL139C TMT1P32643 299 aa5.4□□□□□ -1.54
SCM3YDL139C COT1P32798 439 aa5.4□□□□□ -1.54
SCM3YDL139C GYP6P32806 458 aa5.4□□□□□ -1.54
SCM3YDL139C SPC29P33419 253 aa5.4□□□□□ -1.54
SCM3YDL139C TOD6P34219 525 aa5.4□□□□□ -1.54
SCM3YDL139C YBR238CP38330 731 aaKnown RBP5.4□□□□□ -1.54
SCM3YDL139C CBR1P38626 284 aaKnown RBP5.4□□□□□ -1.54
SCM3YDL139C VAB2P40003 282 aa5.4□□□□□ -1.54
SCM3YDL139C SEC26P41810 973 aaKnown RBP5.4□□□□□ -1.54
SCM3YDL139C NMD5P46970 1048 aa5.4□□□□□ -1.54
SCM3YDL139C STB4P50104 949 aa5.4□□□□□ -1.54
SCM3YDL139C RRT6P53117 311 aaPredicted RBP5.4□□□□□ -1.54
SCM3YDL139C YGR283CP53336 341 aaPredicted RBP5.4□□□□□ -1.54
SCM3YDL139C CUR1Q06469 252 aa5.4□□□□□ -1.54
SCM3YDL139C YPR196WQ06595 470 aa5.4□□□□□ -1.54
SCM3YDL139C ATG23Q06671 453 aa5.4□□□□□ -1.54
SCM3YDL139C ENV7Q12003 364 aa5.4□□□□□ -1.54
SCM3YDL139C OSW2Q12202 724 aa5.4□□□□□ -1.54
SCM3YDL139C BI3Q9ZZW7 517 aa5.4□□□□□ -1.54
SCM3YDL139C UBR2Q07963 1872 aa5.39□□□□□ -1.55
SCM3YDL139C RPS13P05756 151 aaKnown RBP5.39□□□□□ -1.55
SCM3YDL139C PRE10P21242 288 aaKnown RBP RIP-Chip data5.39□□□□□ -1.55not detected
SCM3YDL139C VBA3P25594 458 aa5.39□□□□□ -1.55
SCM3YDL139C EMC3P36039 253 aa5.39□□□□□ -1.55
SCM3YDL139C UBP13P38187 747 aa5.39□□□□□ -1.55
SCM3YDL139C YAP1801P38856 637 aa5.39□□□□□ -1.55
SCM3YDL139C KAP123P40069 1113 aaKnown RBP5.39□□□□□ -1.55
SCM3YDL139C SDS3P40505 327 aa5.39□□□□□ -1.55
SCM3YDL139C SKP2P42843 763 aa5.39□□□□□ -1.55
SCM3YDL139C TY4A-JP47023 414 aa5.39□□□□□ -1.55
SCM3YDL139C CUL3P53202 744 aa5.39□□□□□ -1.55
SCM3YDL139C SLG1P54867 378 aa5.39□□□□□ -1.55
SCM3YDL139C DON1Q05610 365 aa5.39□□□□□ -1.55
SCM3YDL139C YPR078CQ06813 372 aa5.39□□□□□ -1.55
SCM3YDL139C YOR352WQ08816 343 aa5.39□□□□□ -1.55
SCM3YDL139C ECM3Q99252 613 aa5.39□□□□□ -1.55
SCM3YDL139C YLR422WQ06409 1932 aa5.38□□□□□ -1.55
SCM3YDL139C VPS13Q07878 3144 aa5.38□□□□□ -1.55
SCM3YDL139C ARG4P04076 463 aaPredicted RBP5.38□□□□□ -1.55
SCM3YDL139C CDC9P04819 755 aa5.38□□□□□ -1.55
SCM3YDL139C PET111P08468 800 aa5.38□□□□□ -1.55
SCM3YDL139C EST1P17214 699 aaPredicted RBP5.38□□□□□ -1.55
SCM3YDL139C TSR4P25040 408 aa5.38□□□□□ -1.55
SCM3YDL139C DPB3P27344 201 aa5.38□□□□□ -1.55
SCM3YDL139C PRR1P28708 518 aa5.38□□□□□ -1.55
SCM3YDL139C HXT3P32466 567 aaKnown RBP5.38□□□□□ -1.55
SCM3YDL139C CSG2P35206 410 aa5.38□□□□□ -1.55
SCM3YDL139C RIM4P38741 713 aa5.38□□□□□ -1.55
SCM3YDL139C CAJ1P39101 391 aa5.38□□□□□ -1.55
SCM3YDL139C BUD16P39988 312 aa5.38□□□□□ -1.55
SCM3YDL139C LCP5P40079 357 aaPredicted RBP5.38□□□□□ -1.55
SCM3YDL139C NDC80P40460 691 aa5.38□□□□□ -1.55
SCM3YDL139C MAF1P41910 395 aa5.38□□□□□ -1.55
SCM3YDL139C PHO86P46956 311 aa5.38□□□□□ -1.55
SCM3YDL139C CTK3P46963 296 aaPredicted RBP5.38□□□□□ -1.55
SCM3YDL139C PSP2P50109 593 aaKnown RBP5.38□□□□□ -1.55
SCM3YDL139C SEC5P89102 971 aa5.38□□□□□ -1.55
SCM3YDL139C RNY1Q02933 434 aaKnown RBP5.38□□□□□ -1.55
SCM3YDL139C TDA9Q04545 1251 aa5.38□□□□□ -1.55
SCM3YDL139C RLP24Q07915 199 aaKnown RBP5.38□□□□□ -1.55
SCM3YDL139C ATG11Q12527 1178 aa5.38□□□□□ -1.55
SCM3YDL139C AI5_BETAQ9ZZX0 354 aa5.38□□□□□ -1.55
SCM3YDL139C CYC1P00044 109 aaPredicted RBP5.37□□□□□ -1.55
SCM3YDL139C RPO26P20435 155 aa5.37□□□□□ -1.55
SCM3YDL139C CKI1P20485 582 aa5.37□□□□□ -1.55
SCM3YDL139C CAD1P24813 409 aaKnown RBP5.37□□□□□ -1.55
SCM3YDL139C YCR015CP25616 317 aa5.37□□□□□ -1.55
SCM3YDL139C SFP1P32432 683 aa5.37□□□□□ -1.55
SCM3YDL139C GCG1P32656 232 aaKnown RBP5.37□□□□□ -1.55
SCM3YDL139C RRT2P38332 387 aa5.37□□□□□ -1.55
SCM3YDL139C RCK2P38623 610 aa5.37□□□□□ -1.55
SCM3YDL139C TCB2P48231 1178 aa5.37□□□□□ -1.55
SCM3YDL139C KAP114P53067 1004 aa5.37□□□□□ -1.55
SCM3YDL139C CWC22P53333 577 aaKnown RBP5.37□□□□□ -1.55
SCM3YDL139C ESBP6P53918 673 aa5.37□□□□□ -1.55
SCM3YDL139C RPA49Q01080 415 aaPredicted RBP5.37□□□□□ -1.55
SCM3YDL139C ELP3Q02908 557 aaKnown RBP5.37□□□□□ -1.55
SCM3YDL139C VPS72Q03388 795 aa5.37□□□□□ -1.55
SCM3YDL139C ROT1Q03691 256 aa5.37□□□□□ -1.55
SCM3YDL139C GIR2Q03768 265 aaPredicted RBP5.37□□□□□ -1.55
SCM3YDL139C IWR1Q07532 353 aaPredicted RBP5.37□□□□□ -1.55
SCM3YDL139C ABP140Q08641 628 aaKnown RBP5.37□□□□□ -1.55
SCM3YDL139C DAS2Q12084 232 aa5.37□□□□□ -1.55
SCM3YDL139C NOP58Q12499 511 aaKnown RBP5.37□□□□□ -1.55
SCM3YDL139C SOD2P00447 233 aa5.36□□□□□ -1.55
SCM3YDL139C ASP3-2P0CX77 362 aa5.36□□□□□ -1.55
SCM3YDL139C ASP3-3P0CX78 362 aa5.36□□□□□ -1.55
SCM3YDL139C ASP3-4P0CX79 362 aa5.36□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms