RNA–Protein interactions for RNA: YCR088W

ABP1, Transcript of Actin-binding protein of the cortical actin cytoskeleton, yeastyeast

Gene ABP1, Length 1,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ABP1YCR088W PXR1P53335 271 aaPredicted RBP8.08□□□□□ -1.12
ABP1YCR088W ATG26Q06321 1198 aa8.08□□□□□ -1.12
ABP1YCR088W FMP25Q08023 583 aa8.08□□□□□ -1.12
ABP1YCR088W RRP36Q12481 300 aaPredicted RBP8.08□□□□□ -1.12
ABP1YCR088W STE2D6VTK4 431 aa8.07□□□□□ -1.12
ABP1YCR088W SBP1P10080 294 aaKnown RBP8.07□□□□□ -1.12
ABP1YCR088W WHI2P12611 486 aa8.07□□□□□ -1.12
ABP1YCR088W RGR1P19263 1082 aa8.07□□□□□ -1.12
ABP1YCR088W PMI40P29952 429 aaKnown RBP8.07□□□□□ -1.12
ABP1YCR088W CCR4P31384 837 aaKnown RBP8.07□□□□□ -1.12
ABP1YCR088W RME1P32338 300 aaKnown RBP8.07□□□□□ -1.12
ABP1YCR088W PCS60P38137 543 aaKnown RBP RIP-Chip data8.07□□□□□ -1.12not detected
ABP1YCR088W AIM18P38884 321 aa8.07□□□□□ -1.12
ABP1YCR088W NPT1P39683 429 aaKnown RBP8.07□□□□□ -1.12
ABP1YCR088W MND2P40577 368 aa8.07□□□□□ -1.12
ABP1YCR088W RLP7P40693 322 aaKnown RBP8.07□□□□□ -1.12
ABP1YCR088W ARC1P46672 376 aaKnown RBP8.07□□□□□ -1.12
ABP1YCR088W YJR054WP47114 497 aa8.07□□□□□ -1.12
ABP1YCR088W STB4P50104 949 aa8.07□□□□□ -1.12
ABP1YCR088W NCS6P53088 359 aa8.07□□□□□ -1.12
ABP1YCR088W BUD32P53323 261 aa8.07□□□□□ -1.12
ABP1YCR088W CWC21Q03375 135 aaKnown RBP8.07□□□□□ -1.12
ABP1YCR088W SLD7Q08457 257 aa8.07□□□□□ -1.12
ABP1YCR088W MSC6Q08818 692 aaKnown RBP8.07□□□□□ -1.12
ABP1YCR088W CHS5Q12114 671 aaKnown RBP8.07□□□□□ -1.12
ABP1YCR088W MAS2P11914 482 aa8.07□□□□□ -1.12
ABP1YCR088W MSB1P21339 1137 aaKnown RBP8.07□□□□□ -1.12
ABP1YCR088W YCL068CP25593 260 aa8.07□□□□□ -1.12
ABP1YCR088W VPH2P32341 215 aa8.07□□□□□ -1.12
ABP1YCR088W PHA2P32452 334 aa8.07□□□□□ -1.12
ABP1YCR088W EAP1P36041 632 aaKnown RBP8.07□□□□□ -1.12
ABP1YCR088W RDH54P38086 958 aa8.07□□□□□ -1.12
ABP1YCR088W ATG12P38316 186 aa8.07□□□□□ -1.12
ABP1YCR088W KSP1P38691 1029 aaKnown RBP8.07□□□□□ -1.12
ABP1YCR088W PPE1P38796 400 aa8.07□□□□□ -1.12
ABP1YCR088W PEA2P40091 420 aa8.07□□□□□ -1.12
ABP1YCR088W MPH1P40562 993 aa8.07□□□□□ -1.12
ABP1YCR088W NET1P47035 1189 aa8.07□□□□□ -1.12
ABP1YCR088W JJJ3P47138 172 aa8.07□□□□□ -1.12
ABP1YCR088W DCP2P53550 970 aaKnown RBP8.07□□□□□ -1.12
ABP1YCR088W DOT1Q04089 582 aaKnown RBP8.07□□□□□ -1.12
ABP1YCR088W GLO2Q05584 274 aa8.07□□□□□ -1.12
ABP1YCR088W NSE1Q07913 336 aa8.07□□□□□ -1.12
ABP1YCR088W MCH5Q08777 521 aa8.07□□□□□ -1.12
ABP1YCR088W DBP10Q12389 995 aaKnown RBP8.07□□□□□ -1.12
ABP1YCR088W TOM1Q03280 3268 aa8.06□□□□□ -1.12
ABP1YCR088W HRR25P29295 494 aaKnown RBP8.06□□□□□ -1.12
ABP1YCR088W SPT16P32558 1035 aaKnown RBP8.06□□□□□ -1.12
ABP1YCR088W BUD2P33314 1104 aa8.06□□□□□ -1.12
ABP1YCR088W NAN1Q02931 896 aaKnown RBP8.06□□□□□ -1.12
ABP1YCR088W MUB1Q03162 620 aa8.06□□□□□ -1.12
ABP1YCR088W TAF11Q04226 346 aa8.06□□□□□ -1.12
ABP1YCR088W THI20Q08224 551 aa8.06□□□□□ -1.12
ABP1YCR088W NRT1Q08485 598 aa8.06□□□□□ -1.12
ABP1YCR088W HFI1Q12060 488 aa8.06□□□□□ -1.12
ABP1YCR088W GET4Q12125 312 aa8.06□□□□□ -1.12
ABP1YCR088W REC8Q12188 680 aa8.06□□□□□ -1.12
ABP1YCR088W CTF3Q12748 733 aa8.06□□□□□ -1.12
ABP1YCR088W ADF1Q2V2Q1 113 aa8.06□□□□□ -1.12
ABP1YCR088W GCY1P14065 312 aaKnown RBP RIP-Chip data8.05□□□□□ -1.12not detected
ABP1YCR088W HSP26P15992 214 aaKnown RBP RIP-Chip data8.05□□□□□ -1.12not detected
ABP1YCR088W ADE2P21264 571 aaKnown RBP8.05□□□□□ -1.12
ABP1YCR088W LRE1P25579 583 aaKnown RBP8.05□□□□□ -1.12
ABP1YCR088W ZIP1P31111 875 aa8.05□□□□□ -1.12
ABP1YCR088W TFC1P32367 649 aa8.05□□□□□ -1.12
ABP1YCR088W OTU2P38747 307 aaKnown RBP8.05□□□□□ -1.12
ABP1YCR088W YHI9P38765 294 aa8.05□□□□□ -1.12
ABP1YCR088W YAT2P40017 923 aa8.05□□□□□ -1.12
ABP1YCR088W ATM1P40416 690 aa8.05□□□□□ -1.12
ABP1YCR088W GCN20P43535 752 aaKnown RBP8.05□□□□□ -1.12
ABP1YCR088W PFD1P46988 109 aa8.05□□□□□ -1.12
ABP1YCR088W YAF9P53930 226 aa8.05□□□□□ -1.12
ABP1YCR088W REX2P54964 269 aaKnown RBP8.05□□□□□ -1.12
ABP1YCR088W YMR155WQ03795 547 aa8.05□□□□□ -1.12
ABP1YCR088W CSN9Q03981 162 aa8.05□□□□□ -1.12
ABP1YCR088W YDR179W-AQ03983 463 aa8.05□□□□□ -1.12
ABP1YCR088W YPR097WQ06839 1073 aa8.05□□□□□ -1.12
ABP1YCR088W HRT3Q12347 344 aa8.05□□□□□ -1.12
ABP1YCR088W RHO2P06781 192 aa8.05□□□□□ -1.12
ABP1YCR088W GLN3P18494 730 aa8.05□□□□□ -1.12
ABP1YCR088W PTC1P35182 281 aa8.05□□□□□ -1.12
ABP1YCR088W MRPL7P36519 292 aa8.05□□□□□ -1.12
ABP1YCR088W TBS1P38114 1094 aa8.05□□□□□ -1.12
ABP1YCR088W RIM4P38741 713 aa8.05□□□□□ -1.12
ABP1YCR088W CRP1P38845 465 aaKnown RBP8.05□□□□□ -1.12
ABP1YCR088W INP51P40559 946 aaKnown RBP8.05□□□□□ -1.12
ABP1YCR088W FMP32P43557 207 aa8.05□□□□□ -1.12
ABP1YCR088W IML2P47031 731 aa8.05□□□□□ -1.12
ABP1YCR088W BNA3P47039 444 aaKnown RBP8.05□□□□□ -1.12
ABP1YCR088W ALG11P53954 548 aaKnown RBP8.05□□□□□ -1.12
ABP1YCR088W SKI8Q02793 397 aaPredicted RBP8.05□□□□□ -1.12
ABP1YCR088W CWC15Q03772 175 aaKnown RBP8.05□□□□□ -1.12
ABP1YCR088W CDC123Q05791 360 aa8.05□□□□□ -1.12
ABP1YCR088W YIG1Q08956 461 aa8.05□□□□□ -1.12
ABP1YCR088W CAR1P00812 333 aaKnown RBP8.04□□□□□ -1.12
ABP1YCR088W PAB1P04147 577 aaKnown RBP RIP-Chip data8.04□□□□□ -1.12not detected
ABP1YCR088W ERG20P08524 352 aaKnown RBP8.04□□□□□ -1.12
ABP1YCR088W SUI3P09064 285 aaKnown RBP8.04□□□□□ -1.12
ABP1YCR088W SEC66P33754 206 aa8.04□□□□□ -1.12
ABP1YCR088W BIT2P38346 545 aa8.04□□□□□ -1.12
Retrieved 100 of 5,963 RNA–protein pairs in 38.5 ms