RNA–Protein interactions for RNA: YBR280C

SAF1, Transcript of F-Box protein involved in proteasome-dependent degradation of Aah1p, yeast

Gene SAF1, Length 1,914 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SAF1	YBR280C	CIR2	Q08822	631 aa		4.66	□□□□□ -1.66
SAF1	YBR280C	APC11	Q12157	165 aa		4.66	□□□□□ -1.66
SAF1	YBR280C	AFI1	Q99222	893 aa		4.66	□□□□□ -1.66
SAF1	YBR280C	YBR056W-A	I2HB52	66 aa		4.65	□□□□□ -1.67
SAF1	YBR280C	YKR104W	P0CE69	306 aa		4.65	□□□□□ -1.67
SAF1	YBR280C	RED1	P14291	827 aa		4.65	□□□□□ -1.67
SAF1	YBR280C	PMA2	P19657	947 aa		4.65	□□□□□ -1.67
SAF1	YBR280C	SPC110	P32380	944 aa		4.65	□□□□□ -1.67
SAF1	YBR280C	FUI1	P38196	639 aa		4.65	□□□□□ -1.67
SAF1	YBR280C	RRM3	P38766	723 aa		4.65	□□□□□ -1.67
SAF1	YBR280C	YEL028W	P39989	153 aa		4.65	□□□□□ -1.67
SAF1	YBR280C	TRF5	P48561	642 aa	Known RBP	4.65	□□□□□ -1.67
SAF1	YBR280C	VAC7	P53950	1165 aa		4.65	□□□□□ -1.67
SAF1	YBR280C	ETT1	Q08421	412 aa	Known RBP	4.65	□□□□□ -1.67
SAF1	YBR280C	SKM1	Q12469	655 aa		4.65	□□□□□ -1.67
SAF1	YBR280C	HFA1	P32874	2273 aa		4.65	□□□□□ -1.67
SAF1	YBR280C	SNT1	P25357	1226 aa		4.64	□□□□□ -1.67
SAF1	YBR280C	UBS1	P38290	277 aa		4.64	□□□□□ -1.67
SAF1	YBR280C	RPS10B	P46784	105 aa	Known RBP	4.64	□□□□□ -1.67
SAF1	YBR280C	CTK3	P46963	296 aa	Predicted RBP	4.64	□□□□□ -1.67
SAF1	YBR280C	TAD1	P53065	400 aa		4.64	□□□□□ -1.67
SAF1	YBR280C	SPC105	P53148	917 aa		4.64	□□□□□ -1.67
SAF1	YBR280C	POB3	Q04636	552 aa	Known RBP	4.64	□□□□□ -1.67
SAF1	YBR280C	YDR222W	Q04925	415 aa		4.64	□□□□□ -1.67
SAF1	YBR280C	KAP95	Q06142	861 aa	Known RBP	4.64	□□□□□ -1.67
SAF1	YBR280C	CDC73	Q06697	393 aa		4.64	□□□□□ -1.67
SAF1	YBR280C	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	4.64	□□□□□ -1.67	not detected
SAF1	YBR280C	TRE2	Q08693	809 aa		4.64	□□□□□ -1.67
SAF1	YBR280C	RPS10A	Q08745	105 aa	Predicted RBP	4.64	□□□□□ -1.67
SAF1	YBR280C	SCH9	P11792	824 aa	Known RBP	4.64	□□□□□ -1.67
SAF1	YBR280C	ALY1	P36117	915 aa		4.64	□□□□□ -1.67
SAF1	YBR280C	SWC5	P38326	303 aa		4.64	□□□□□ -1.67
SAF1	YBR280C	TMN3	P40071	706 aa		4.64	□□□□□ -1.67
SAF1	YBR280C	RRN7	P40992	514 aa		4.64	□□□□□ -1.67
SAF1	YBR280C	DLD2	P46681	530 aa	Known RBP	4.64	□□□□□ -1.67
SAF1	YBR280C	IPI3	P53877	555 aa		4.64	□□□□□ -1.67
SAF1	YBR280C	YDR131C	Q03899	556 aa		4.64	□□□□□ -1.67
SAF1	YBR280C	UFO1	Q04511	668 aa		4.64	□□□□□ -1.67
SAF1	YBR280C	SWC7	Q06707	132 aa		4.64	□□□□□ -1.67
SAF1	YBR280C	TMA16	Q08687	178 aa		4.64	□□□□□ -1.67
SAF1	YBR280C	MPH2	P0CD99	609 aa		4.63	□□□□□ -1.67
SAF1	YBR280C	RPS6A	P0CX37	236 aa	Known RBP	4.63	□□□□□ -1.67
SAF1	YBR280C	RPS6B	P0CX38	236 aa	Predicted RBP	4.63	□□□□□ -1.67
SAF1	YBR280C	TUP1	P16649	713 aa		4.63	□□□□□ -1.67
SAF1	YBR280C	PPH21	P23594	369 aa		4.63	□□□□□ -1.67
SAF1	YBR280C	MSH3	P25336	1018 aa		4.63	□□□□□ -1.67
SAF1	YBR280C	LRP1	P38801	184 aa	Known RBP	4.63	□□□□□ -1.67
SAF1	YBR280C	MNN11	P46985	422 aa	Known RBP	4.63	□□□□□ -1.67
SAF1	YBR280C	SET2	P46995	733 aa	Known RBP	4.63	□□□□□ -1.67
SAF1	YBR280C	YJL132W	P47014	750 aa		4.63	□□□□□ -1.67
SAF1	YBR280C	YMR1	P47147	688 aa	Known RBP RIP-Chip data	4.63	□□□□□ -1.67	not detected
SAF1	YBR280C	YGR111W	P53265	400 aa		4.63	□□□□□ -1.67
SAF1	YBR280C	NRD1	P53617	575 aa	Known RBP RIP-Chip data	4.63	□□□□□ -1.67	not detected
SAF1	YBR280C	RPL34A	P87262	121 aa	Predicted RBP	4.63	□□□□□ -1.67
SAF1	YBR280C	YBL029C-A	Q3E756	94 aa		4.63	□□□□□ -1.67
SAF1	YBR280C	INH1	P01097	85 aa		4.62	□□□□□ -1.67
SAF1	YBR280C	CLC1	P17891	233 aa		4.62	□□□□□ -1.67
SAF1	YBR280C	TRX1	P22217	103 aa	Known RBP	4.62	□□□□□ -1.67
SAF1	YBR280C	RBK1	P25332	333 aa		4.62	□□□□□ -1.67
SAF1	YBR280C	BEM1	P29366	551 aa		4.62	□□□□□ -1.67
SAF1	YBR280C	AIM26	P32858	118 aa		4.62	□□□□□ -1.67
SAF1	YBR280C	TFC3	P34111	1160 aa		4.62	□□□□□ -1.67
SAF1	YBR280C	IRS4	P36115	615 aa	Known RBP	4.62	□□□□□ -1.67
SAF1	YBR280C	PSY4	P38193	441 aa		4.62	□□□□□ -1.67
SAF1	YBR280C	YHL041W	P38730	149 aa		4.62	□□□□□ -1.67
SAF1	YBR280C	PTI1	P39927	425 aa	Predicted RBP	4.62	□□□□□ -1.67
SAF1	YBR280C	HXT8	P40886	569 aa		4.62	□□□□□ -1.67
SAF1	YBR280C	MMM1	P41800	426 aa		4.62	□□□□□ -1.67
SAF1	YBR280C	RRT5	P43607	289 aa		4.62	□□□□□ -1.67
SAF1	YBR280C	NUP85	P46673	744 aa		4.62	□□□□□ -1.67
SAF1	YBR280C	TCB2	P48231	1178 aa		4.62	□□□□□ -1.67
SAF1	YBR280C	BNI4	P53858	892 aa		4.62	□□□□□ -1.67
SAF1	YBR280C	YNL108C	P53929	270 aa		4.62	□□□□□ -1.67
SAF1	YBR280C	CDC55	Q00362	526 aa		4.62	□□□□□ -1.67
SAF1	YBR280C	REG1	Q00816	1014 aa		4.62	□□□□□ -1.67
SAF1	YBR280C	ARG7	Q04728	441 aa		4.62	□□□□□ -1.67
SAF1	YBR280C	CMS1	Q07897	291 aa	Known RBP	4.62	□□□□□ -1.67
SAF1	YBR280C	YOL036W	Q08206	761 aa		4.62	□□□□□ -1.67
SAF1	YBR280C	GPM3	Q12326	303 aa		4.62	□□□□□ -1.67
SAF1	YBR280C	MEC1	P38111	2368 aa		4.62	□□□□□ -1.67
SAF1	YBR280C	AAT2	P23542	418 aa	Known RBP	4.62	□□□□□ -1.67
SAF1	YBR280C	PAT1	P25644	796 aa	Known RBP	4.62	□□□□□ -1.67
SAF1	YBR280C	YKL050C	P35736	922 aa		4.62	□□□□□ -1.67
SAF1	YBR280C	JNM1	P36224	373 aa		4.62	□□□□□ -1.67
SAF1	YBR280C	SHM1	P37292	490 aa	Predicted RBP	4.62	□□□□□ -1.67
SAF1	YBR280C	BIT2	P38346	545 aa		4.62	□□□□□ -1.67
SAF1	YBR280C	SRP72	P38688	640 aa	Known RBP	4.62	□□□□□ -1.67
SAF1	YBR280C	MSR1	P38714	643 aa		4.62	□□□□□ -1.67
SAF1	YBR280C	ALR2	P43553	858 aa		4.62	□□□□□ -1.67
SAF1	YBR280C	SIP4	P46954	829 aa		4.62	□□□□□ -1.67
SAF1	YBR280C	SWC4	P53201	476 aa		4.62	□□□□□ -1.67
SAF1	YBR280C	YNL143C	P53908	130 aa		4.62	□□□□□ -1.67
SAF1	YBR280C	TEP1	P53916	434 aa		4.62	□□□□□ -1.67
SAF1	YBR280C	YNL040W	P53960	456 aa	Predicted RBP	4.62	□□□□□ -1.67
SAF1	YBR280C	YOL073C	Q08232	322 aa		4.62	□□□□□ -1.67
SAF1	YBR280C	PGC1	Q08959	321 aa		4.62	□□□□□ -1.67
SAF1	YBR280C	OCA6	Q12454	224 aa		4.62	□□□□□ -1.67
SAF1	YBR280C	SEC39	Q12745	709 aa		4.62	□□□□□ -1.67
SAF1	YBR280C	EFG1	Q3E705	233 aa	Known RBP	4.62	□□□□□ -1.67
SAF1	YBR280C	SEY1	Q99287	776 aa		4.62	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 24.7 ms