RNA–Protein interactions for RNA: YBR123C

TFC1, Transcript of Subunit of RNA polymerase III transcription initiation factor complex, yeast

Gene TFC1, Length 1,950 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TFC1	YBR123C	GUD1	Q07729	489 aa		3.2	□□□□□ -1.9
TFC1	YBR123C	HSP33	Q08914	237 aa	Known RBP	3.2	□□□□□ -1.9
TFC1	YBR123C	GRE1	Q08969	168 aa		3.2	□□□□□ -1.9
TFC1	YBR123C	HSP32	Q08992	237 aa		3.2	□□□□□ -1.9
TFC1	YBR123C	GET3	Q12154	354 aa	Known RBP	3.2	□□□□□ -1.9
TFC1	YBR123C	GRX6	Q12438	231 aa		3.2	□□□□□ -1.9
TFC1	YBR123C	LAG2	Q92325	660 aa		3.2	□□□□□ -1.9
TFC1	YBR123C	SKI3	P17883	1432 aa	Known RBP	3.2	□□□□□ -1.9
TFC1	YBR123C	LAM4	P38800	1345 aa		3.2	□□□□□ -1.9
TFC1	YBR123C	LEU2	P04173	364 aa	Predicted RBP	3.2	□□□□□ -1.9
TFC1	YBR123C	CDC4	P07834	779 aa		3.2	□□□□□ -1.9
TFC1	YBR123C	KSS1	P14681	368 aa		3.2	□□□□□ -1.9
TFC1	YBR123C	UBC1	P21734	215 aa	Known RBP	3.2	□□□□□ -1.9
TFC1	YBR123C	PDC6	P26263	563 aa	Known RBP	3.2	□□□□□ -1.9
TFC1	YBR123C	CRM1	P30822	1084 aa	Known RBP	3.2	□□□□□ -1.9
TFC1	YBR123C	ERG1	P32476	496 aa	Known RBP	3.2	□□□□□ -1.9
TFC1	YBR123C	STE13	P33894	931 aa		3.2	□□□□□ -1.9
TFC1	YBR123C	FAT1	P38225	669 aa		3.2	□□□□□ -1.9
TFC1	YBR123C	MSC7	P38694	644 aa		3.2	□□□□□ -1.9
TFC1	YBR123C	TDA3	P38758	523 aa		3.2	□□□□□ -1.9
TFC1	YBR123C	ERC1	P38767	581 aa		3.2	□□□□□ -1.9
TFC1	YBR123C	YHR182W	P38870	785 aa		3.2	□□□□□ -1.9
TFC1	YBR123C	YEL057C	P39983	233 aa		3.2	□□□□□ -1.9
TFC1	YBR123C	ZRG8	P40021	1076 aa		3.2	□□□□□ -1.9
TFC1	YBR123C	PCL6	P40038	420 aa		3.2	□□□□□ -1.9
TFC1	YBR123C	RTR1	P40084	226 aa	Predicted RBP	3.2	□□□□□ -1.9
TFC1	YBR123C	AGE2	P40529	298 aa		3.2	□□□□□ -1.9
TFC1	YBR123C	IAH1	P41734	238 aa		3.2	□□□□□ -1.9
TFC1	YBR123C	YFL052W	P43551	465 aa		3.2	□□□□□ -1.9
TFC1	YBR123C	MRX6	P48564	524 aa		3.2	□□□□□ -1.9
TFC1	YBR123C	MON1	P53129	644 aa		3.2	□□□□□ -1.9
TFC1	YBR123C	YGR117C	P53270	476 aa		3.2	□□□□□ -1.9
TFC1	YBR123C	BRE5	P53741	515 aa	Known RBP	3.2	□□□□□ -1.9
TFC1	YBR123C	ATG33	Q06485	197 aa		3.2	□□□□□ -1.9
TFC1	YBR123C	SMC5	Q08204	1093 aa		3.2	□□□□□ -1.9
TFC1	YBR123C	TIP41	Q12199	356 aa		3.2	□□□□□ -1.9
TFC1	YBR123C	MRPL23	Q12487	163 aa	Predicted RBP	3.2	□□□□□ -1.9
TFC1	YBR123C	TIF6	Q12522	245 aa	Known RBP	3.2	□□□□□ -1.9
TFC1	YBR123C	RPS21B	Q3E754	87 aa	Known RBP	3.2	□□□□□ -1.9
TFC1	YBR123C	GAL7	P08431	366 aa		3.19	□□□□□ -1.9
TFC1	YBR123C	RPL19A	P0CX82	189 aa	Known RBP	3.19	□□□□□ -1.9
TFC1	YBR123C	RPL19B	P0CX83	189 aa	Predicted RBP	3.19	□□□□□ -1.9
TFC1	YBR123C	STE6	P12866	1290 aa		3.19	□□□□□ -1.9
TFC1	YBR123C	ABF1	P14164	731 aa		3.19	□□□□□ -1.9
TFC1	YBR123C	POL3	P15436	1097 aa		3.19	□□□□□ -1.9
TFC1	YBR123C	EMC1	P25574	760 aa		3.19	□□□□□ -1.9
TFC1	YBR123C	MSP1	P28737	362 aa		3.19	□□□□□ -1.9
TFC1	YBR123C	YME2	P32843	850 aa		3.19	□□□□□ -1.9
TFC1	YBR123C	TIF3	P34167	436 aa	Known RBP	3.19	□□□□□ -1.9
TFC1	YBR123C	PET10	P36139	283 aa		3.19	□□□□□ -1.9
TFC1	YBR123C	LIN1	P38852	340 aa	Predicted RBP	3.19	□□□□□ -1.9
TFC1	YBR123C	LYS9	P38999	446 aa		3.19	□□□□□ -1.9
TFC1	YBR123C	EAF5	P39995	279 aa		3.19	□□□□□ -1.9
TFC1	YBR123C	AIR1	P40507	360 aa	Known RBP	3.19	□□□□□ -1.9
TFC1	YBR123C	URB2	P47108	1174 aa		3.19	□□□□□ -1.9
TFC1	YBR123C	ASK10	P48361	1146 aa		3.19	□□□□□ -1.9
TFC1	YBR123C	BPL1	P48445	690 aa	Predicted RBP	3.19	□□□□□ -1.9
TFC1	YBR123C	ALT2	P52892	507 aa		3.19	□□□□□ -1.9
TFC1	YBR123C	ART5	P53244	586 aa	Known RBP	3.19	□□□□□ -1.9
TFC1	YBR123C	MRPL13	Q02204	264 aa		3.19	□□□□□ -1.9
TFC1	YBR123C	FRK1	Q03002	865 aa	Predicted RBP	3.19	□□□□□ -1.9
TFC1	YBR123C	ARX1	Q03862	593 aa	Known RBP	3.19	□□□□□ -1.9
TFC1	YBR123C	DCS1	Q06151	350 aa		3.19	□□□□□ -1.9
TFC1	YBR123C	RSC3	Q06639	885 aa		3.19	□□□□□ -1.9
TFC1	YBR123C	TSR1	Q07381	788 aa	Known RBP	3.19	□□□□□ -1.9
TFC1	YBR123C	XYL2	Q07993	356 aa		3.19	□□□□□ -1.9
TFC1	YBR123C	DSE3	Q08729	430 aa		3.19	□□□□□ -1.9
TFC1	YBR123C	YDL109C	Q12103	647 aa		3.19	□□□□□ -1.9
TFC1	YBR123C	RPN5	Q12250	445 aa	Known RBP	3.19	□□□□□ -1.9
TFC1	YBR123C	EST1	P17214	699 aa	Predicted RBP	3.18	□□□□□ -1.9
TFC1	YBR123C	VMA3	P25515	160 aa		3.18	□□□□□ -1.9
TFC1	YBR123C	ERV1	P27882	189 aa		3.18	□□□□□ -1.9
TFC1	YBR123C	GDH2	P33327	1092 aa	Known RBP	3.18	□□□□□ -1.9
TFC1	YBR123C	OCT1	P35999	772 aa		3.18	□□□□□ -1.9
TFC1	YBR123C	SRO77	P38163	1010 aa		3.18	□□□□□ -1.9
TFC1	YBR123C	YHR202W	P38887	602 aa		3.18	□□□□□ -1.9
TFC1	YBR123C	SHC1	P39000	512 aa		3.18	□□□□□ -1.9
TFC1	YBR123C	SLN1	P39928	1220 aa	Predicted RBP	3.18	□□□□□ -1.9
TFC1	YBR123C	UBP7	P40453	1071 aa		3.18	□□□□□ -1.9
TFC1	YBR123C	ULP2	P40537	1034 aa	Predicted RBP	3.18	□□□□□ -1.9
TFC1	YBR123C	ARF3	P40994	183 aa	RIP-Chip data	3.18	□□□□□ -1.9	not detected
TFC1	YBR123C	YFL066C	P43538	392 aa		3.18	□□□□□ -1.9
TFC1	YBR123C	SIP4	P46954	829 aa		3.18	□□□□□ -1.9
TFC1	YBR123C	CTF18	P49956	741 aa		3.18	□□□□□ -1.9
TFC1	YBR123C	CUL3	P53202	744 aa		3.18	□□□□□ -1.9
TFC1	YBR123C	PRM1	P53835	661 aa		3.18	□□□□□ -1.9
TFC1	YBR123C	YNL134C	P53912	376 aa	Known RBP	3.18	□□□□□ -1.9
TFC1	YBR123C	EOS1	P53938	366 aa		3.18	□□□□□ -1.9
TFC1	YBR123C	PEX19	Q07418	342 aa		3.18	□□□□□ -1.9
TFC1	YBR123C	TCO89	Q08921	799 aa		3.18	□□□□□ -1.9
TFC1	YBR123C	TUB3	P09734	445 aa	Known RBP	3.18	□□□□□ -1.9
TFC1	YBR123C	INO1	P11986	533 aa		3.18	□□□□□ -1.9
TFC1	YBR123C	COT1	P32798	439 aa		3.18	□□□□□ -1.9
TFC1	YBR123C	MAC1	P35192	417 aa		3.18	□□□□□ -1.9
TFC1	YBR123C	YPT52	P36018	234 aa	Known RBP	3.18	□□□□□ -1.9
TFC1	YBR123C	AKL1	P38080	1108 aa	Known RBP	3.18	□□□□□ -1.9
TFC1	YBR123C	YHL017W	P38745	532 aa		3.18	□□□□□ -1.9
TFC1	YBR123C	PIK1	P39104	1066 aa		3.18	□□□□□ -1.9
TFC1	YBR123C	GIP4	P39732	760 aa		3.18	□□□□□ -1.9
TFC1	YBR123C	YRB2	P40517	327 aa		3.18	□□□□□ -1.9

Retrieved 100 of 5,963 RNA–protein pairs in 8.5 ms