RNA–Protein interactions for RNA: YAL005C

SSA1, Transcript of ATPase involved in protein folding and NLS-directed nuclear transport, yeast

Gene SSA1, Length 1,929 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSA1	YAL005C	MEH1	Q02205	184 aa		13.72	□□□□□ -0.21
SSA1	YAL005C	TOF2	Q02208	771 aa		13.72	□□□□□ -0.21
SSA1	YAL005C	SEG1	Q04279	960 aa		13.72	□□□□□ -0.21
SSA1	YAL005C	TMN2	Q04562	672 aa		13.72	□□□□□ -0.21
SSA1	YAL005C	DAP1	Q12091	152 aa		13.72	□□□□□ -0.21
SSA1	YAL005C	OCA6	Q12454	224 aa		13.72	□□□□□ -0.21
SSA1	YAL005C	RAD1	P06777	1100 aa		13.71	□□□□□ -0.21
SSA1	YAL005C	HSC82	P15108	705 aa	Known RBP	13.71	□□□□□ -0.21
SSA1	YAL005C	PMI40	P29952	429 aa	Known RBP	13.71	□□□□□ -0.21
SSA1	YAL005C	MUD2	P36084	527 aa	Known RBP	13.71	□□□□□ -0.21
SSA1	YAL005C	SMX2	P40204	77 aa	Known RBP	13.71	□□□□□ -0.21
SSA1	YAL005C	CPR6	P53691	371 aa	Known RBP	13.71	□□□□□ -0.21
SSA1	YAL005C	COX5A	P00424	153 aa		13.7	□□□□□ -0.22
SSA1	YAL005C	RPB2	P08518	1224 aa	Known RBP	13.7	□□□□□ -0.22
SSA1	YAL005C	ADH4	P10127	382 aa		13.7	□□□□□ -0.22
SSA1	YAL005C	PYC1	P11154	1178 aa	Known RBP	13.7	□□□□□ -0.22
SSA1	YAL005C	MRS6	P32864	603 aa	Known RBP	13.7	□□□□□ -0.22
SSA1	YAL005C	VAC8	P39968	578 aa		13.7	□□□□□ -0.22
SSA1	YAL005C	YPL014W	Q02606	381 aa		13.7	□□□□□ -0.22
SSA1	YAL005C	YMR027W	Q04371	470 aa		13.7	□□□□□ -0.22
SSA1	YAL005C	NDD1	Q08887	554 aa		13.7	□□□□□ -0.22
SSA1	YAL005C	ARG4	P04076	463 aa	Predicted RBP	13.7	□□□□□ -0.22
SSA1	YAL005C	MIS1	P09440	975 aa	Known RBP	13.7	□□□□□ -0.22
SSA1	YAL005C	KEX2	P13134	814 aa		13.7	□□□□□ -0.22
SSA1	YAL005C	RPA135	P22138	1203 aa	Known RBP	13.7	□□□□□ -0.22
SSA1	YAL005C	YKL097C	P34245	136 aa		13.7	□□□□□ -0.22
SSA1	YAL005C	RPC37	P36121	282 aa		13.7	□□□□□ -0.22
SSA1	YAL005C	UBP7	P40453	1071 aa		13.7	□□□□□ -0.22
SSA1	YAL005C	ALA1	P40825	983 aa	Known RBP	13.7	□□□□□ -0.22
SSA1	YAL005C	IML2	P47031	731 aa		13.7	□□□□□ -0.22
SSA1	YAL005C	GND2	P53319	492 aa		13.7	□□□□□ -0.22
SSA1	YAL005C	TUB4	P53378	473 aa		13.7	□□□□□ -0.22
SSA1	YAL005C	YMR206W	Q03695	313 aa		13.7	□□□□□ -0.22
SSA1	YAL005C	ENT5	Q03769	411 aa	Known RBP	13.7	□□□□□ -0.22
SSA1	YAL005C	ERR1	P0CX10	437 aa		13.69	□□□□□ -0.22
SSA1	YAL005C	ERR2	P0CX11	437 aa		13.69	□□□□□ -0.22
SSA1	YAL005C	URA7	P28274	579 aa	Known RBP	13.69	□□□□□ -0.22
SSA1	YAL005C	RDH54	P38086	958 aa		13.69	□□□□□ -0.22
SSA1	YAL005C	POL12	P38121	705 aa	Predicted RBP	13.69	□□□□□ -0.22
SSA1	YAL005C	CCT2	P39076	527 aa	Known RBP	13.69	□□□□□ -0.22
SSA1	YAL005C	ERR3	P42222	437 aa		13.69	□□□□□ -0.22
SSA1	YAL005C	ROK1	P45818	564 aa	Predicted RBP	13.69	□□□□□ -0.22
SSA1	YAL005C	SLU7	Q02775	382 aa	Known RBP	13.69	□□□□□ -0.22
SSA1	YAL005C	FRA1	Q07825	749 aa		13.69	□□□□□ -0.22
SSA1	YAL005C	MPC54	Q08550	464 aa		13.69	□□□□□ -0.22
SSA1	YAL005C	GID7	P25569	745 aa		13.68	□□□□□ -0.22
SSA1	YAL005C	KAR9	P32526	644 aa		13.68	□□□□□ -0.22
SSA1	YAL005C	KES1	P35844	434 aa	Known RBP	13.68	□□□□□ -0.22
SSA1	YAL005C	SRP68	P38687	599 aa	Known RBP	13.68	□□□□□ -0.22
SSA1	YAL005C	SAE2	P46946	345 aa		13.68	□□□□□ -0.22
SSA1	YAL005C	PCL10	P53124	433 aa		13.68	□□□□□ -0.22
SSA1	YAL005C	TIM13	P53299	105 aa		13.68	□□□□□ -0.22
SSA1	YAL005C	YNR063W	P53749	607 aa		13.68	□□□□□ -0.22
SSA1	YAL005C	PDH1	Q12428	516 aa	Known RBP	13.68	□□□□□ -0.22
SSA1	YAL005C	PPZ1	P26570	692 aa		13.68	□□□□□ -0.22
SSA1	YAL005C	YME1	P32795	747 aa		13.68	□□□□□ -0.22
SSA1	YAL005C	ADD66	P36040	267 aa		13.68	□□□□□ -0.22
SSA1	YAL005C	AMA1	P50082	593 aa		13.68	□□□□□ -0.22
SSA1	YAL005C	RTA1	P53047	317 aa		13.68	□□□□□ -0.22
SSA1	YAL005C	PEX15	Q08215	383 aa		13.68	□□□□□ -0.22
SSA1	YAL005C	TEF1	P02994	458 aa	Known RBP	13.67	□□□□□ -0.22
SSA1	YAL005C	REV1	P12689	985 aa		13.67	□□□□□ -0.22
SSA1	YAL005C	ARF2	P19146	181 aa	Known RBP	13.67	□□□□□ -0.22
SSA1	YAL005C	PAT1	P25644	796 aa	Known RBP	13.67	□□□□□ -0.22
SSA1	YAL005C	PTC3	P34221	468 aa	Known RBP	13.67	□□□□□ -0.22
SSA1	YAL005C	SMF2	P38778	549 aa		13.67	□□□□□ -0.22
SSA1	YAL005C	ELO3	P40319	345 aa		13.67	□□□□□ -0.22
SSA1	YAL005C	YFL012W	P43580	148 aa		13.67	□□□□□ -0.22
SSA1	YAL005C	SHR3	Q02774	210 aa		13.67	□□□□□ -0.22
SSA1	YAL005C	STE23	Q06010	1027 aa		13.67	□□□□□ -0.22
SSA1	YAL005C	SFH1	Q06168	426 aa		13.67	□□□□□ -0.22
SSA1	YAL005C	BET2	P20133	325 aa		13.66	□□□□□ -0.22
SSA1	YAL005C	URB2	P47108	1174 aa		13.66	□□□□□ -0.22
SSA1	YAL005C	USA1	Q03714	838 aa		13.66	□□□□□ -0.22
SSA1	YAL005C	YHM2	Q04013	314 aa		13.66	□□□□□ -0.22
SSA1	YAL005C	HEM14	P40012	539 aa		13.66	□□□□□ -0.22
SSA1	YAL005C	RRN7	P40992	514 aa		13.66	□□□□□ -0.22
SSA1	YAL005C	ZIP2	P53061	704 aa		13.66	□□□□□ -0.22
SSA1	YAL005C	ADE13	Q05911	482 aa	Known RBP	13.66	□□□□□ -0.22
SSA1	YAL005C	MED6	P38782	295 aa		13.65	□□□□□ -0.22
SSA1	YAL005C	YSH1	Q06224	779 aa	Predicted RBP	13.65	□□□□□ -0.22
SSA1	YAL005C	PGC1	Q08959	321 aa		13.65	□□□□□ -0.22
SSA1	YAL005C	YMR084W	A2P2R3	262 aa		13.64	□□□□□ -0.23
SSA1	YAL005C	KAR4	P25583	335 aa		13.64	□□□□□ -0.23
SSA1	YAL005C	IMG2	P25642	146 aa	Predicted RBP	13.64	□□□□□ -0.23
SSA1	YAL005C	SRP101	P32916	621 aa		13.64	□□□□□ -0.23
SSA1	YAL005C	LDB17	Q12342	491 aa		13.64	□□□□□ -0.23
SSA1	YAL005C	DOT6	P40059	670 aa	Known RBP	13.64	□□□□□ -0.23
SSA1	YAL005C	CUE5	Q08412	411 aa	Known RBP	13.64	□□□□□ -0.23
SSA1	YAL005C	ENO1	P00924	437 aa	Known RBP	13.63	□□□□□ -0.23
SSA1	YAL005C	ILS1	P09436	1072 aa	Known RBP	13.63	□□□□□ -0.23
SSA1	YAL005C	KIN3	P22209	435 aa		13.63	□□□□□ -0.23
SSA1	YAL005C	AAT2	P23542	418 aa	Known RBP	13.63	□□□□□ -0.23
SSA1	YAL005C	MRPL40	P36534	297 aa		13.63	□□□□□ -0.23
SSA1	YAL005C	APM3	P38153	483 aa		13.63	□□□□□ -0.23
SSA1	YAL005C	EXO1	P39875	702 aa		13.63	□□□□□ -0.23
SSA1	YAL005C	ERG10	P41338	398 aa	Known RBP	13.63	□□□□□ -0.23
SSA1	YAL005C	REG1	Q00816	1014 aa		13.63	□□□□□ -0.23
SSA1	YAL005C	HOS1	Q12214	470 aa		13.63	□□□□□ -0.23
SSA1	YAL005C	YLR046C	Q12253	270 aa		13.63	□□□□□ -0.23

Retrieved 100 of 5,963 RNA–protein pairs in 28.3 ms