RNA–Protein interactions for RNA: ENST00000641891.1

PHGDH-229, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,175 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-229ENST00000641891 PTPAQ15257 358 aa19.65■□□□□ 0.74
PHGDH-229ENST00000641891 CTR9Q6PD62 1173 aa19.65■□□□□ 0.74
PHGDH-229ENST00000641891 ESR2Q92731 530 aa19.65■□□□□ 0.74
PHGDH-229ENST00000641891 BRIP1Q9BX63 1249 aa19.65■□□□□ 0.74
PHGDH-229ENST00000641891 AATFQ9NY61 560 aaKnown RBP eCLIP19.65■□□□□ 0.74
PHGDH-229ENST00000641891 SEMA3EO15041 775 aa19.64■□□□□ 0.74
PHGDH-229ENST00000641891 RFC4P35249 363 aa19.64■□□□□ 0.74
PHGDH-229ENST00000641891 FANCBQ8NB91 859 aa19.64■□□□□ 0.74
PHGDH-229ENST00000641891 MYH2Q9UKX2 1941 aa19.64■□□□□ 0.73
PHGDH-229ENST00000641891 ZNF202O95125 648 aa19.64■□□□□ 0.73
PHGDH-229ENST00000641891 PTGS1P23219 599 aa19.64■□□□□ 0.73
PHGDH-229ENST00000641891 FAM196AQ6ZSG2 479 aa19.64■□□□□ 0.73
PHGDH-229ENST00000641891 CRACR2BQ8N4Y2 399 aaPredicted RBP19.64■□□□□ 0.73
PHGDH-229ENST00000641891 ENAHQ8N8S7 591 aaPredicted RBP19.64■□□□□ 0.73
PHGDH-229ENST00000641891 PIBF1Q8WXW3 757 aa19.64■□□□□ 0.73
PHGDH-229ENST00000641891 SBF2Q86WG5 1849 aa19.64■□□□□ 0.73
PHGDH-229ENST00000641891 BTBD18B2RXH4 712 aa19.63■□□□□ 0.73
PHGDH-229ENST00000641891 CAVIN2O95810 425 aa19.63■□□□□ 0.73
PHGDH-229ENST00000641891 CMA1P23946 247 aa19.63■□□□□ 0.73
PHGDH-229ENST00000641891 DHX40Q8IX18 779 aaKnown RBP19.63■□□□□ 0.73
PHGDH-229ENST00000641891 TMTC2Q8N394 836 aa19.63■□□□□ 0.73
PHGDH-229ENST00000641891 GJD4Q96KN9 370 aaPredicted RBP19.63■□□□□ 0.73
PHGDH-229ENST00000641891 MTA3Q9BTC8 594 aa19.63■□□□□ 0.73
PHGDH-229ENST00000641891 ANO10Q9NW15 660 aa19.63■□□□□ 0.73
PHGDH-229ENST00000641891 NRBP1Q9UHY1 535 aa19.63■□□□□ 0.73
PHGDH-229ENST00000641891 PYCARDQ9ULZ3 195 aa19.63■□□□□ 0.73
PHGDH-229ENST00000641891 SPATA31A6Q5VVP1 1343 aa19.63■□□□□ 0.73
PHGDH-229ENST00000641891 IRS2Q9Y4H2 1338 aa19.63■□□□□ 0.73
PHGDH-229ENST00000641891 USP17L12C9JPN9 530 aa19.63■□□□□ 0.73
PHGDH-229ENST00000641891 USP17L21D6R901 530 aa19.63■□□□□ 0.73
PHGDH-229ENST00000641891 MMP1P03956 469 aa19.63■□□□□ 0.73
PHGDH-229ENST00000641891 NFIXQ14938 502 aa19.63■□□□□ 0.73
PHGDH-229ENST00000641891 TRAPPC3LQ5T215 181 aa19.63■□□□□ 0.73
PHGDH-229ENST00000641891 TRIM22Q8IYM9 498 aa19.63■□□□□ 0.73
PHGDH-229ENST00000641891 CLIC6Q96NY7 704 aa19.63■□□□□ 0.73
PHGDH-229ENST00000641891 ZSCAN10Q96SZ4 725 aaPredicted RBP19.63■□□□□ 0.73
PHGDH-229ENST00000641891 GOLGA6L19H0YKK7 550 aa19.62■□□□□ 0.73
PHGDH-229ENST00000641891 SHC4Q6S5L8 630 aa19.62■□□□□ 0.73
PHGDH-229ENST00000641891 WASF1Q92558 559 aa19.62■□□□□ 0.73
PHGDH-229ENST00000641891 LRRC4BQ9NT99 713 aa19.62■□□□□ 0.73
PHGDH-229ENST00000641891 GOLGA6L6A8MZA4 724 aa19.61■□□□□ 0.73
PHGDH-229ENST00000641891 CYP2D6P10635 497 aa19.61■□□□□ 0.73
PHGDH-229ENST00000641891 MEX3CQ5U5Q3 659 aaKnown RBP19.61■□□□□ 0.73
PHGDH-229ENST00000641891 NOSTRINQ8IVI9 506 aa19.61■□□□□ 0.73
PHGDH-229ENST00000641891 DRC7Q8IY82 874 aa19.61■□□□□ 0.73
PHGDH-229ENST00000641891 DIS3L2Q8IYB7 885 aaKnown RBP19.61■□□□□ 0.73
PHGDH-229ENST00000641891 KIAA1468Q9P260 1216 aa19.61■□□□□ 0.73
PHGDH-229ENST00000641891 PDS5AQ29RF7 1337 aaKnown RBP19.61■□□□□ 0.73
PHGDH-229ENST00000641891 PPP6R2O75170 966 aa19.61■□□□□ 0.73
PHGDH-229ENST00000641891 NOLC1Q14978 699 aaKnown RBP eCLIP19.61■□□□□ 0.73
PHGDH-229ENST00000641891 AOPEPQ8N6M6 819 aa19.61■□□□□ 0.73
PHGDH-229ENST00000641891 CCDC196A0A1B0GTZ2 297 aa19.6■□□□□ 0.73
PHGDH-229ENST00000641891 BIN1O00499 593 aa19.6■□□□□ 0.73
PHGDH-229ENST00000641891 DEXIO95424 95 aa19.6■□□□□ 0.73
PHGDH-229ENST00000641891 DPCR1Q3MIW9 517 aa19.6■□□□□ 0.73
PHGDH-229ENST00000641891 CCDC186Q7Z3E2 898 aa19.6■□□□□ 0.73
PHGDH-229ENST00000641891 SHISA4Q96DD7 197 aa19.6■□□□□ 0.73
PHGDH-229ENST00000641891 GPR101Q96P66 508 aaPredicted RBP19.6■□□□□ 0.73
PHGDH-229ENST00000641891 DCP1AQ9NPI6 582 aaPredicted RBP19.6■□□□□ 0.73
PHGDH-229ENST00000641891 MAST2Q6P0Q8 1798 aa19.6■□□□□ 0.73
PHGDH-229ENST00000641891 hCG_1642624A0A1W2PR95 340 aa19.6■□□□□ 0.73
PHGDH-229ENST00000641891 TOB1P50616 345 aaPredicted RBP19.6■□□□□ 0.73
PHGDH-229ENST00000641891 NR5A1Q13285 461 aa19.6■□□□□ 0.73
PHGDH-229ENST00000641891 SLC4A8Q2Y0W8 1093 aa19.6■□□□□ 0.73
PHGDH-229ENST00000641891 CEP57L1Q8IYX8 460 aa19.6■□□□□ 0.73
PHGDH-229ENST00000641891 ANKIB1Q9P2G1 1089 aa19.6■□□□□ 0.73
PHGDH-229ENST00000641891 BECN2A8MW95 431 aa19.59■□□□□ 0.73
PHGDH-229ENST00000641891 NMT2O60551 498 aa19.59■□□□□ 0.73
PHGDH-229ENST00000641891 SLC3A2P08195 630 aaKnown RBP19.59■□□□□ 0.73
PHGDH-229ENST00000641891 RCAN1P53805 252 aa19.59■□□□□ 0.73
PHGDH-229ENST00000641891 IFIT1BQ5T764 474 aaKnown RBP19.59■□□□□ 0.73
PHGDH-229ENST00000641891 OXER1Q8TDS5 423 aa19.59■□□□□ 0.73
PHGDH-229ENST00000641891 CRNKL1Q9BZJ0 848 aaKnown RBP19.59■□□□□ 0.73
PHGDH-229ENST00000641891 HPSEQ9Y251 543 aa19.59■□□□□ 0.73
PHGDH-229ENST00000641891 AFF2P51816 1311 aa19.59■□□□□ 0.73
PHGDH-229ENST00000641891 LAMB1P07942 1786 aa19.59■□□□□ 0.73
PHGDH-229ENST00000641891 PLEKHA8P1O95397 391 aa19.59■□□□□ 0.73
PHGDH-229ENST00000641891 FGRP09769 529 aa19.59■□□□□ 0.73
PHGDH-229ENST00000641891 SYKP43405 635 aa19.59■□□□□ 0.73
PHGDH-229ENST00000641891 GRAPQ13588 217 aa19.59■□□□□ 0.73
PHGDH-229ENST00000641891 SAFBQ15424 915 aaKnown RBP eCLIP19.59■□□□□ 0.73
PHGDH-229ENST00000641891 CNBD1Q8NA66 436 aa19.59■□□□□ 0.73
PHGDH-229ENST00000641891 GRAPLQ8TC17 118 aaPredicted RBP19.59■□□□□ 0.73
PHGDH-229ENST00000641891 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.59■□□□□ 0.73
PHGDH-229ENST00000641891 TPM3P06753 285 aa19.58■□□□□ 0.72
PHGDH-229ENST00000641891 FAM47AQ5JRC9 791 aa19.58■□□□□ 0.72
PHGDH-229ENST00000641891 JMYQ8N9B5 988 aa19.58■□□□□ 0.72
PHGDH-229ENST00000641891 CLIP2Q9UDT6 1046 aa19.58■□□□□ 0.72
PHGDH-229ENST00000641891 DLEC1Q9Y238 1755 aa19.58■□□□□ 0.72
PHGDH-229ENST00000641891 KIAA1551Q9HCM1 1747 aa19.58■□□□□ 0.72
PHGDH-229ENST00000641891 LRMPQ12912 555 aa19.57■□□□□ 0.72
PHGDH-229ENST00000641891 RESP18Q5W5W9 173 aa19.57■□□□□ 0.72
PHGDH-229ENST00000641891 SARM1Q6SZW1 724 aa19.57■□□□□ 0.72
PHGDH-229ENST00000641891 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.57■□□□□ 0.72
PHGDH-229ENST00000641891 DZIP1Q86YF9 867 aaKnown RBP19.57■□□□□ 0.72
PHGDH-229ENST00000641891 SEPT12Q8IYM1 358 aa19.57■□□□□ 0.72
PHGDH-229ENST00000641891 KIAA1524Q8TCG1 905 aa19.57■□□□□ 0.72
PHGDH-229ENST00000641891 MYH6P13533 1939 aa19.57■□□□□ 0.72
PHGDH-229ENST00000641891 CCDC88AQ3V6T2 1871 aa19.57■□□□□ 0.72
PHGDH-229ENST00000641891 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms