RNA–Protein interactions for RNA: ENST00000635997.1

NEDD4L-238, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene NEDD4L, Length 4,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-238ENST00000635997 N4BP3O15049 544 aa16.3■□□□□ 0.2
NEDD4L-238ENST00000635997 TFAP4Q01664 338 aa16.3■□□□□ 0.2
NEDD4L-238ENST00000635997 STX1AQ16623 288 aa16.3■□□□□ 0.2
NEDD4L-238ENST00000635997 ANTXR1Q9H6X2 564 aa16.3■□□□□ 0.2
NEDD4L-238ENST00000635997 SPATA31D1Q6ZQQ2 1576 aa16.3■□□□□ 0.2
NEDD4L-238ENST00000635997 FMNL1O95466 1100 aaPredicted RBP16.3■□□□□ 0.2
NEDD4L-238ENST00000635997 ZNF853P0CG23 659 aa16.3■□□□□ 0.2
NEDD4L-238ENST00000635997 ASIC1P78348 528 aa16.3■□□□□ 0.2
NEDD4L-238ENST00000635997 PDE8BO95263 885 aa16.29■□□□□ 0.2
NEDD4L-238ENST00000635997 ECE1P42892 770 aa16.29■□□□□ 0.2
NEDD4L-238ENST00000635997 HLFQ16534 295 aa16.29■□□□□ 0.2
NEDD4L-238ENST00000635997 PNMA8AQ86V59 439 aaPredicted RBP16.29■□□□□ 0.2
NEDD4L-238ENST00000635997 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.29■□□□□ 0.23e-8■□□□□ 9
NEDD4L-238ENST00000635997 PDE6AP16499 860 aa16.29■□□□□ 0.2
NEDD4L-238ENST00000635997 AMPD3Q01432 767 aa16.29■□□□□ 0.2
NEDD4L-238ENST00000635997 C16orf45Q96MC5 204 aaPredicted RBP16.29■□□□□ 0.2
NEDD4L-238ENST00000635997 VWA3AA6NCI4 1184 aa16.29■□□□□ 0.2
NEDD4L-238ENST00000635997 PARP1P09874 1014 aaKnown RBP16.29■□□□□ 0.2
NEDD4L-238ENST00000635997 CLTCL1P53675 1640 aa16.29■□□□□ 0.2
NEDD4L-238ENST00000635997 CCP110O43303 1012 aa16.29■□□□□ 0.2
NEDD4L-238ENST00000635997 TGFB2P61812 414 aa16.29■□□□□ 0.2
NEDD4L-238ENST00000635997 PLCD3Q8N3E9 789 aa16.28■□□□□ 0.2
NEDD4L-238ENST00000635997 CHAMP1Q96JM3 812 aa16.28■□□□□ 0.2
NEDD4L-238ENST00000635997 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.28■□□□□ 0.2
NEDD4L-238ENST00000635997 JAKMIP3Q5VZ66 844 aa16.28■□□□□ 0.2
NEDD4L-238ENST00000635997 ZNF397Q8NF99 534 aaPredicted RBP16.28■□□□□ 0.2
NEDD4L-238ENST00000635997 KCNJ14Q9UNX9 436 aa16.28■□□□□ 0.2
NEDD4L-238ENST00000635997 HUNKP57058 714 aa16.28■□□□□ 0.2
NEDD4L-238ENST00000635997 PDCL2Q8N4E4 241 aa16.28■□□□□ 0.2
NEDD4L-238ENST00000635997 TBCAO75347 108 aaKnown RBP16.27■□□□□ 0.2
NEDD4L-238ENST00000635997 CALML3P27482 149 aa16.27■□□□□ 0.2
NEDD4L-238ENST00000635997 ITPK1Q13572 414 aa16.27■□□□□ 0.2
NEDD4L-238ENST00000635997 SIRT2Q8IXJ6 389 aa16.27■□□□□ 0.2
NEDD4L-238ENST00000635997 CD2APQ9Y5K6 639 aa16.27■□□□□ 0.2
NEDD4L-238ENST00000635997 E7EWF7 191 aa16.27■□□□□ 0.2
NEDD4L-238ENST00000635997 URI1O94763 535 aaPredicted RBP16.27■□□□□ 0.2
NEDD4L-238ENST00000635997 CENPHQ9H3R5 247 aa16.27■□□□□ 0.2
NEDD4L-238ENST00000635997 COPRSQ9NQ92 184 aa16.27■□□□□ 0.2
NEDD4L-238ENST00000635997 PPRC1Q5VV67 1664 aaKnown RBP16.27■□□□□ 0.2
NEDD4L-238ENST00000635997 MACROD2A1Z1Q3 448 aa16.27■□□□□ 0.19
NEDD4L-238ENST00000635997 DIS3L2Q8IYB7 885 aaKnown RBP16.27■□□□□ 0.19
NEDD4L-238ENST00000635997 GPR101Q96P66 508 aaPredicted RBP16.27■□□□□ 0.19
NEDD4L-238ENST00000635997 ZNF157P51786 506 aaPredicted RBP16.27■□□□□ 0.19
NEDD4L-238ENST00000635997 AOPEPQ8N6M6 819 aa16.27■□□□□ 0.19
NEDD4L-238ENST00000635997 EXOC1Q9NV70 894 aa16.27■□□□□ 0.19
NEDD4L-238ENST00000635997 USP31Q70CQ4 1352 aa16.26■□□□□ 0.19
NEDD4L-238ENST00000635997 FGAP02671 866 aa16.26■□□□□ 0.19
NEDD4L-238ENST00000635997 ADD1P35611 737 aaKnown RBP16.26■□□□□ 0.19
NEDD4L-238ENST00000635997 KRT2P35908 639 aa16.26■□□□□ 0.19
NEDD4L-238ENST00000635997 SPA17Q15506 151 aa16.26■□□□□ 0.19
NEDD4L-238ENST00000635997 PTPN14Q15678 1187 aa16.26■□□□□ 0.19
NEDD4L-238ENST00000635997 TCHPQ9BT92 498 aa16.26■□□□□ 0.19
NEDD4L-238ENST00000635997 TMEM106CQ9BVX2 250 aa16.26■□□□□ 0.19
NEDD4L-238ENST00000635997 CCDC66A2RUB6 948 aa16.26■□□□□ 0.19
NEDD4L-238ENST00000635997 DYNC1I1O14576 645 aa16.26■□□□□ 0.19
NEDD4L-238ENST00000635997 SLC1A4P43007 532 aa16.26■□□□□ 0.19
NEDD4L-238ENST00000635997 PRR5LQ6MZQ0 368 aa16.26■□□□□ 0.19
NEDD4L-238ENST00000635997 PIK3AP1Q6ZUJ8 805 aa16.26■□□□□ 0.19
NEDD4L-238ENST00000635997 TRERF1Q96PN7 1200 aa16.26■□□□□ 0.19
NEDD4L-238ENST00000635997 ZNRF3Q9ULT6 936 aa16.26■□□□□ 0.19
NEDD4L-238ENST00000635997 ERICH4A6NGS2 130 aa16.26■□□□□ 0.19
NEDD4L-238ENST00000635997 AKNAD1Q5T1N1 836 aa16.26■□□□□ 0.19
NEDD4L-238ENST00000635997 RRAGCQ9HB90 399 aa16.26■□□□□ 0.19
NEDD4L-238ENST00000635997 HOMER2Q9NSB8 354 aa16.26■□□□□ 0.19
NEDD4L-238ENST00000635997 RTL9Q8NET4 1388 aa16.26■□□□□ 0.19
NEDD4L-238ENST00000635997 KIF4BQ2VIQ3 1234 aa16.25■□□□□ 0.19
NEDD4L-238ENST00000635997 INTS4Q96HW7 963 aaKnown RBP16.25■□□□□ 0.19
NEDD4L-238ENST00000635997 HSPD1P10809 573 aaKnown RBP16.25■□□□□ 0.19
NEDD4L-238ENST00000635997 GNA11P29992 359 aa16.25■□□□□ 0.19
NEDD4L-238ENST00000635997 HSPA4P34932 840 aa16.25■□□□□ 0.19
NEDD4L-238ENST00000635997 AXDND1Q5T1B0 1012 aaPredicted RBP16.25■□□□□ 0.19
NEDD4L-238ENST00000635997 BICD1Q96G01 975 aa16.25■□□□□ 0.19
NEDD4L-238ENST00000635997 SYT17Q9BSW7 474 aa16.25■□□□□ 0.19
NEDD4L-238ENST00000635997 MAPK8IP1Q9UQF2 711 aa16.25■□□□□ 0.19
NEDD4L-238ENST00000635997 UBE4AQ14139 1066 aa16.25■□□□□ 0.19
NEDD4L-238ENST00000635997 EPHA10Q5JZY3 1008 aa16.25■□□□□ 0.19
NEDD4L-238ENST00000635997 KRT79Q5XKE5 535 aa16.25■□□□□ 0.19
NEDD4L-238ENST00000635997 RASEFQ8IZ41 740 aa16.25■□□□□ 0.19
NEDD4L-238ENST00000635997 TMEM87BQ96K49 555 aa16.25■□□□□ 0.19
NEDD4L-238ENST00000635997 CNOT7Q9UIV1 285 aaKnown RBP16.25■□□□□ 0.19
NEDD4L-238ENST00000635997 USH1GQ495M9 461 aa16.24■□□□□ 0.19
NEDD4L-238ENST00000635997 STAMQ92783 540 aa16.24■□□□□ 0.19
NEDD4L-238ENST00000635997 ERCC4Q92889 916 aaPredicted RBP16.24■□□□□ 0.19
NEDD4L-238ENST00000635997 UBASH3AP57075 661 aa16.24■□□□□ 0.19
NEDD4L-238ENST00000635997 FAM193AP78312 1265 aa16.24■□□□□ 0.19
NEDD4L-238ENST00000635997 LRSAM1Q6UWE0 723 aa16.24■□□□□ 0.19
NEDD4L-238ENST00000635997 DTHD1Q6ZMT9 781 aa16.24■□□□□ 0.19
NEDD4L-238ENST00000635997 CERS3Q8IU89 383 aa16.24■□□□□ 0.19
NEDD4L-238ENST00000635997 ERMNQ8TAM6 284 aa16.24■□□□□ 0.19
NEDD4L-238ENST00000635997 COA1Q9GZY4 146 aa16.24■□□□□ 0.19
NEDD4L-238ENST00000635997 CPDO75976 1380 aa16.24■□□□□ 0.19
NEDD4L-238ENST00000635997 CHMP2AO43633 222 aa16.24■□□□□ 0.19
NEDD4L-238ENST00000635997 KIF20AO95235 890 aa16.24■□□□□ 0.19
NEDD4L-238ENST00000635997 PUF60Q9UHX1 559 aaKnown RBP16.24■□□□□ 0.19
NEDD4L-238ENST00000635997 ME3Q16798 604 aa16.23■□□□□ 0.19
NEDD4L-238ENST00000635997 KANK3Q6NY19 840 aa16.23■□□□□ 0.19
NEDD4L-238ENST00000635997 PODNQ7Z5L7 613 aa16.23■□□□□ 0.19
NEDD4L-238ENST00000635997 ZSWIM4Q9H7M6 989 aa16.23■□□□□ 0.19
NEDD4L-238ENST00000635997 VPS54Q9P1Q0 977 aa16.23■□□□□ 0.19
NEDD4L-238ENST00000635997 ECE2O60344 883 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms