RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 SLC15A2Q16348 729 aa17.01■□□□□ 0.31
CDH1-213ENST00000612417 TMEM87BQ96K49 555 aa17.01■□□□□ 0.31
CDH1-213ENST00000612417 CRAMP1Q96RY5 1269 aa17.01■□□□□ 0.31
CDH1-213ENST00000612417 KIAA1468Q9P260 1216 aa17.01■□□□□ 0.31
CDH1-213ENST00000612417 KIF28PB7ZC32 967 aa17■□□□□ 0.31
CDH1-213ENST00000612417 POLR3DP05423 398 aaPredicted RBP17■□□□□ 0.31
CDH1-213ENST00000612417 CYP7A1P22680 504 aa17■□□□□ 0.31
CDH1-213ENST00000612417 AXDND1Q5T1B0 1012 aaPredicted RBP17■□□□□ 0.31
CDH1-213ENST00000612417 ANO1Q5XXA6 986 aa17■□□□□ 0.31
CDH1-213ENST00000612417 SYNE3Q6ZMZ3 975 aa17■□□□□ 0.31
CDH1-213ENST00000612417 CYB5R4Q7L1T6 521 aa17■□□□□ 0.31
CDH1-213ENST00000612417 STRBPQ96SI9 672 aaKnown RBP17■□□□□ 0.31
CDH1-213ENST00000612417 SDF4Q9BRK5 362 aa17■□□□□ 0.31
CDH1-213ENST00000612417 ARMT1Q9H993 441 aa17■□□□□ 0.31
CDH1-213ENST00000612417 COL1A1P02452 1464 aaPredicted RBP17■□□□□ 0.31
CDH1-213ENST00000612417 ANKRD31Q8N7Z5 1873 aa17■□□□□ 0.31
CDH1-213ENST00000612417 KLRG2A4D1S0 409 aaPredicted RBP17■□□□□ 0.31
CDH1-213ENST00000612417 UFL1O94874 794 aa17■□□□□ 0.31
CDH1-213ENST00000612417 CMA1P23946 247 aa17■□□□□ 0.31
CDH1-213ENST00000612417 APOA5Q6Q788 366 aa17■□□□□ 0.31
CDH1-213ENST00000612417 SGMS1Q86VZ5 419 aa17■□□□□ 0.31
CDH1-213ENST00000612417 LRRC8AQ8IWT6 810 aa17■□□□□ 0.31
CDH1-213ENST00000612417 ZNF710Q8N1W2 664 aa17■□□□□ 0.31
CDH1-213ENST00000612417 GPR101Q96P66 508 aaPredicted RBP17■□□□□ 0.31
CDH1-213ENST00000612417 CTIFO43310 598 aaKnown RBP16.99■□□□□ 0.31
CDH1-213ENST00000612417 METAP2P50579 478 aaKnown RBP eCLIP16.99■□□□□ 0.31
CDH1-213ENST00000612417 MIGA1Q8NAN2 632 aa16.99■□□□□ 0.31
CDH1-213ENST00000612417 GGA1Q9UJY5 639 aa16.99■□□□□ 0.31
CDH1-213ENST00000612417 RIOK3O14730 519 aaKnown RBP16.98■□□□□ 0.31
CDH1-213ENST00000612417 PDE6BP35913 854 aa16.98■□□□□ 0.31
CDH1-213ENST00000612417 SLC39A14Q15043 492 aa16.98■□□□□ 0.31
CDH1-213ENST00000612417 ZNF804AQ7Z570 1209 aa16.98■□□□□ 0.31
CDH1-213ENST00000612417 GJB4Q9NTQ9 266 aa16.98■□□□□ 0.31
CDH1-213ENST00000612417 JAG2Q9Y219 1238 aa16.98■□□□□ 0.31
CDH1-213ENST00000612417 NID2Q14112 1375 aa16.98■□□□□ 0.31
CDH1-213ENST00000612417 PPEF1O14829 653 aaPredicted RBP16.98■□□□□ 0.31
CDH1-213ENST00000612417 ATP2B4P23634 1241 aa16.98■□□□□ 0.31
CDH1-213ENST00000612417 BAG6P46379 1132 aa16.98■□□□□ 0.31
CDH1-213ENST00000612417 CPLX2Q6PUV4 134 aaKnown RBP16.98■□□□□ 0.31
CDH1-213ENST00000612417 RAB11FIP4Q86YS3 637 aa16.98■□□□□ 0.31
CDH1-213ENST00000612417 AOPEPQ8N6M6 819 aa16.98■□□□□ 0.31
CDH1-213ENST00000612417 IGDCC4Q8TDY8 1250 aa16.98■□□□□ 0.31
CDH1-213ENST00000612417 PATL2C9JE40 543 aaKnown RBP16.97■□□□□ 0.31
CDH1-213ENST00000612417 ZNF202O95125 648 aa16.97■□□□□ 0.31
CDH1-213ENST00000612417 NPR1P16066 1061 aa16.97■□□□□ 0.31
CDH1-213ENST00000612417 LIFRP42702 1097 aa16.97■□□□□ 0.31
CDH1-213ENST00000612417 NKX2-3Q8TAU0 364 aa16.97■□□□□ 0.31
CDH1-213ENST00000612417 TIGD1Q96MW7 591 aa16.97■□□□□ 0.31
CDH1-213ENST00000612417 ALG1Q9BT22 464 aa16.97■□□□□ 0.31
CDH1-213ENST00000612417 NRXN2Q9P2S2 1712 aa16.97■□□□□ 0.31
CDH1-213ENST00000612417 PPP6R2O75170 966 aa16.97■□□□□ 0.31
CDH1-213ENST00000612417 SRGNP10124 158 aa16.97■□□□□ 0.31
CDH1-213ENST00000612417 NTRK3Q16288 839 aa16.97■□□□□ 0.31
CDH1-213ENST00000612417 LCORLQ8N3X6 602 aa16.97■□□□□ 0.31
CDH1-213ENST00000612417 LY9Q9HBG7 655 aa16.97■□□□□ 0.31
CDH1-213ENST00000612417 STK36Q9NRP7 1315 aa16.96■□□□□ 0.31
CDH1-213ENST00000612417 IRS2Q9Y4H2 1338 aa16.96■□□□□ 0.31
CDH1-213ENST00000612417 A0A087WWV3 80 aa16.96■□□□□ 0.31
CDH1-213ENST00000612417 MAGEB6P1A0A0J9YX57 407 aa16.96■□□□□ 0.31
CDH1-213ENST00000612417 FAM237AA0A1B0GTK4 181 aa16.96■□□□□ 0.31
CDH1-213ENST00000612417 B4E1Z4 1266 aa16.96■□□□□ 0.31
CDH1-213ENST00000612417 C6orf229H3BNL8 230 aa16.96■□□□□ 0.31
CDH1-213ENST00000612417 SLC3A2P08195 630 aaKnown RBP16.96■□□□□ 0.31
CDH1-213ENST00000612417 DPCR1Q3MIW9 517 aa16.96■□□□□ 0.31
CDH1-213ENST00000612417 TMC4Q7Z404 712 aa16.96■□□□□ 0.31
CDH1-213ENST00000612417 DEFB132Q7Z7B7 95 aa16.96■□□□□ 0.31
CDH1-213ENST00000612417 NAPBQ9H115 298 aa16.96■□□□□ 0.31
CDH1-213ENST00000612417 KCND1Q9NSA2 647 aa16.96■□□□□ 0.31
CDH1-213ENST00000612417 SLC4A4Q9Y6R1 1079 aa16.96■□□□□ 0.31
CDH1-213ENST00000612417 PDS5AQ29RF7 1337 aaKnown RBP16.96■□□□□ 0.31
CDH1-213ENST00000612417 SMTNL1A8MU46 457 aa16.95■□□□□ 0.3
CDH1-213ENST00000612417 ZBTB43O43298 467 aa16.95■□□□□ 0.3
CDH1-213ENST00000612417 PRKAB2O43741 272 aa16.95■□□□□ 0.3
CDH1-213ENST00000612417 PFKFB1P16118 471 aa16.95■□□□□ 0.3
CDH1-213ENST00000612417 GNAT2P19087 354 aa16.95■□□□□ 0.3
CDH1-213ENST00000612417 U2AF2P26368 475 aaKnown RBP eCLIP16.95■□□□□ 0.3
CDH1-213ENST00000612417 CDC27P30260 824 aa16.95■□□□□ 0.3
CDH1-213ENST00000612417 KRT40Q6A162 431 aa16.95■□□□□ 0.3
CDH1-213ENST00000612417 ADGRA1Q86SQ6 560 aa16.95■□□□□ 0.3
CDH1-213ENST00000612417 SP8Q8IXZ3 490 aa16.95■□□□□ 0.3
CDH1-213ENST00000612417 ERCC4Q92889 916 aaPredicted RBP16.95■□□□□ 0.3
CDH1-213ENST00000612417 NACAP1Q9BZK3 213 aa16.95■□□□□ 0.3
CDH1-213ENST00000612417 EPB41L4AQ9HCS5 686 aaPredicted RBP16.95■□□□□ 0.3
CDH1-213ENST00000612417 IMPACTQ9P2X3 320 aa16.95■□□□□ 0.3
CDH1-213ENST00000612417 MROH7-TTC4A0A0A0MT08 1334 aa16.95■□□□□ 0.3
CDH1-213ENST00000612417 ALDH1B1P30837 517 aa16.95■□□□□ 0.3
CDH1-213ENST00000612417 GSDMDP57764 484 aa16.95■□□□□ 0.3
CDH1-213ENST00000612417 NLRP12P59046 1061 aa16.95■□□□□ 0.3
CDH1-213ENST00000612417 ZRSR1Q15695 479 aaKnown RBP16.95■□□□□ 0.3
CDH1-213ENST00000612417 IFNL3Q8IZI9 196 aa16.95■□□□□ 0.3
CDH1-213ENST00000612417 JMYQ8N9B5 988 aa16.95■□□□□ 0.3
CDH1-213ENST00000612417 TSC1Q92574 1164 aa16.95■□□□□ 0.3
CDH1-213ENST00000612417 ZNF622Q969S3 477 aaKnown RBP eCLIP16.95■□□□□ 0.3
CDH1-213ENST00000612417 C16orf45Q96MC5 204 aaPredicted RBP16.95■□□□□ 0.3
CDH1-213ENST00000612417 OSBPL5Q9H0X9 879 aaPredicted RBP16.95■□□□□ 0.3
CDH1-213ENST00000612417 CNNM2Q9H8M5 875 aa16.95■□□□□ 0.3
CDH1-213ENST00000612417 HPSEQ9Y251 543 aa16.95■□□□□ 0.3
CDH1-213ENST00000612417 PAXBP1Q9Y5B6 917 aa16.95■□□□□ 0.3
CDH1-213ENST00000612417 CCDC88AQ3V6T2 1871 aa16.94■□□□□ 0.3
CDH1-213ENST00000612417 WDHD1O75717 1129 aaPredicted RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms