RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 CNBD1Q8NA66 436 aa7.26□□□□□ -1.25
SNX13-213ENST00000611725 IFT172Q9UG01 1749 aa7.26□□□□□ -1.25
SNX13-213ENST00000611725 ARHGAP6O43182 974 aa7.26□□□□□ -1.25
SNX13-213ENST00000611725 KIF5CO60282 957 aa7.26□□□□□ -1.25
SNX13-213ENST00000611725 NR5A1Q13285 461 aa7.26□□□□□ -1.25
SNX13-213ENST00000611725 PNOCQ13519 176 aa7.26□□□□□ -1.25
SNX13-213ENST00000611725 CLEC4GQ6UXB4 293 aa7.26□□□□□ -1.25
SNX13-213ENST00000611725 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.26□□□□□ -1.25
SNX13-213ENST00000611725 AATFQ9NY61 560 aaKnown RBP eCLIP7.26□□□□□ -1.25
SNX13-213ENST00000611725 SERTAD1Q9UHV2 236 aa7.26□□□□□ -1.25
SNX13-213ENST00000611725 IKBKBO14920 756 aa7.26□□□□□ -1.25
SNX13-213ENST00000611725 TTC38Q5R3I4 469 aa7.26□□□□□ -1.25
SNX13-213ENST00000611725 FERMT2Q96AC1 680 aa7.26□□□□□ -1.25
SNX13-213ENST00000611725 CTAGE1Q96RT6 745 aa7.26□□□□□ -1.25
SNX13-213ENST00000611725 RAB34Q9BZG1 259 aa7.26□□□□□ -1.25
SNX13-213ENST00000611725 BCL2L12Q9HB09 334 aa7.26□□□□□ -1.25
SNX13-213ENST00000611725 VAT1LQ9HCJ6 419 aa7.26□□□□□ -1.25
SNX13-213ENST00000611725 SPTLC3Q9NUV7 552 aa7.26□□□□□ -1.25
SNX13-213ENST00000611725 A0A0U1RQG5 324 aaPredicted RBP7.26□□□□□ -1.25
SNX13-213ENST00000611725 EVCP57679 992 aa7.26□□□□□ -1.25
SNX13-213ENST00000611725 POSTNQ15063 836 aa7.26□□□□□ -1.25
SNX13-213ENST00000611725 LRRC8AQ8IWT6 810 aa7.26□□□□□ -1.25
SNX13-213ENST00000611725 ZNF34Q8IZ26 560 aa7.26□□□□□ -1.25
SNX13-213ENST00000611725 ZSCAN10Q96SZ4 725 aaPredicted RBP7.26□□□□□ -1.25
SNX13-213ENST00000611725 FANCLQ9NW38 375 aa7.26□□□□□ -1.25
SNX13-213ENST00000611725 ETF1P62495 437 aaKnown RBP7.26□□□□□ -1.25
SNX13-213ENST00000611725 PIK3AP1Q6ZUJ8 805 aa7.26□□□□□ -1.25
SNX13-213ENST00000611725 TRMT44Q8IYL2 757 aaKnown RBP7.26□□□□□ -1.25
SNX13-213ENST00000611725 ZNF215Q9UL58 517 aaPredicted RBP7.26□□□□□ -1.25
SNX13-213ENST00000611725 PPP6R2O75170 966 aa7.25□□□□□ -1.25
SNX13-213ENST00000611725 TFAP4Q01664 338 aa7.25□□□□□ -1.25
SNX13-213ENST00000611725 CCDC70Q6NSX1 233 aa7.25□□□□□ -1.25
SNX13-213ENST00000611725 NUP88Q99567 741 aaPredicted RBP7.25□□□□□ -1.25
SNX13-213ENST00000611725 GOLPH3LQ9H4A5 285 aa7.25□□□□□ -1.25
SNX13-213ENST00000611725 RMND1Q9NWS8 449 aa7.25□□□□□ -1.25
SNX13-213ENST00000611725 PSMA7O14818 248 aa7.25□□□□□ -1.25
SNX13-213ENST00000611725 GTF2F1P35269 517 aaKnown RBP eCLIP7.25□□□□□ -1.25
SNX13-213ENST00000611725 GSG1L2A8MUP6 293 aa7.25□□□□□ -1.25
SNX13-213ENST00000611725 ATP1A3P13637 1013 aa7.25□□□□□ -1.25
SNX13-213ENST00000611725 MCM7P33993 719 aa7.25□□□□□ -1.25
SNX13-213ENST00000611725 KCNQ4P56696 695 aa7.25□□□□□ -1.25
SNX13-213ENST00000611725 IQCB1Q15051 598 aa7.25□□□□□ -1.25
SNX13-213ENST00000611725 HEATR3Q7Z4Q2 680 aa7.25□□□□□ -1.25
SNX13-213ENST00000611725 ZNF804AQ7Z570 1209 aa7.25□□□□□ -1.25
SNX13-213ENST00000611725 ZSCAN29Q8IWY8 852 aaPredicted RBP7.25□□□□□ -1.25
SNX13-213ENST00000611725 WDR66Q8TBY9 1149 aa7.25□□□□□ -1.25
SNX13-213ENST00000611725 ZNF512BQ96KM6 892 aaPredicted RBP7.25□□□□□ -1.25
SNX13-213ENST00000611725 TRIM47Q96LD4 638 aa7.25□□□□□ -1.25
SNX13-213ENST00000611725 SRRTQ9BXP5 876 aaKnown RBP7.25□□□□□ -1.25
SNX13-213ENST00000611725 COL15A1P39059 1388 aa7.25□□□□□ -1.25
SNX13-213ENST00000611725 KRT18P05783 430 aaKnown RBP7.25□□□□□ -1.25
SNX13-213ENST00000611725 CDC27P30260 824 aa7.25□□□□□ -1.25
SNX13-213ENST00000611725 GOLGA6L1Q8N7Z2 621 aa7.25□□□□□ -1.25
SNX13-213ENST00000611725 ENGASEQ8NFI3 743 aa7.25□□□□□ -1.25
SNX13-213ENST00000611725 STAMQ92783 540 aa7.25□□□□□ -1.25
SNX13-213ENST00000611725 CCDC94Q9BW85 323 aaPredicted RBP7.25□□□□□ -1.25
SNX13-213ENST00000611725 FOXP1Q9H334 677 aaPredicted RBP7.25□□□□□ -1.25
SNX13-213ENST00000611725 DCCP43146 1447 aa7.25□□□□□ -1.25
SNX13-213ENST00000611725 SEMA3EO15041 775 aa7.25□□□□□ -1.25
SNX13-213ENST00000611725 PLCG2P16885 1265 aa7.25□□□□□ -1.25
SNX13-213ENST00000611725 FAM47AQ5JRC9 791 aa7.25□□□□□ -1.25
SNX13-213ENST00000611725 ERO1AQ96HE7 468 aa7.25□□□□□ -1.25
SNX13-213ENST00000611725 INCENPQ9NQS7 918 aa7.25□□□□□ -1.25
SNX13-213ENST00000611725 MYO1BO43795 1136 aa7.24□□□□□ -1.25
SNX13-213ENST00000611725 ERLIN1O75477 346 aa7.24□□□□□ -1.25
SNX13-213ENST00000611725 ARID4AP29374 1257 aaPredicted RBP7.24□□□□□ -1.25
SNX13-213ENST00000611725 STAT6P42226 847 aa7.24□□□□□ -1.25
SNX13-213ENST00000611725 NAPAP54920 295 aa7.24□□□□□ -1.25
SNX13-213ENST00000611725 CCDC144BQ3MJ40 725 aa7.24□□□□□ -1.25
SNX13-213ENST00000611725 BAG1Q99933 345 aaPredicted RBP7.24□□□□□ -1.25
SNX13-213ENST00000611725 FMNL1O95466 1100 aaPredicted RBP7.24□□□□□ -1.25
SNX13-213ENST00000611725 MMP1P03956 469 aa7.24□□□□□ -1.25
SNX13-213ENST00000611725 CCDC175P0C221 793 aa7.24□□□□□ -1.25
SNX13-213ENST00000611725 TRAPPC3LQ5T215 181 aa7.24□□□□□ -1.25
SNX13-213ENST00000611725 CYB5R4Q7L1T6 521 aa7.24□□□□□ -1.25
SNX13-213ENST00000611725 CRACR2BQ8N4Y2 399 aaPredicted RBP7.24□□□□□ -1.25
SNX13-213ENST00000611725 TRIML1Q8N9V2 468 aa7.24□□□□□ -1.25
SNX13-213ENST00000611725 ATP8A2Q9NTI2 1148 aa7.24□□□□□ -1.25
SNX13-213ENST00000611725 ARPP21Q9UBL0 812 aaPredicted RBP7.24□□□□□ -1.25
SNX13-213ENST00000611725 KIF28PB7ZC32 967 aa7.24□□□□□ -1.25
SNX13-213ENST00000611725 PTPREP23469 700 aa7.24□□□□□ -1.25
SNX13-213ENST00000611725 ARID5BQ14865 1188 aa7.24□□□□□ -1.25
SNX13-213ENST00000611725 AXDND1Q5T1B0 1012 aaPredicted RBP7.24□□□□□ -1.25
SNX13-213ENST00000611725 RBM43Q6ZSC3 357 aaKnown RBP7.24□□□□□ -1.25
SNX13-213ENST00000611725 SPDYE4A6NLX3 237 aa7.24□□□□□ -1.25
SNX13-213ENST00000611725 PCP11498 1178 aaKnown RBP7.24□□□□□ -1.25
SNX13-213ENST00000611725 TMEM266Q2M3C6 531 aa7.24□□□□□ -1.25
SNX13-213ENST00000611725 PLEKHG2Q9H7P9 1386 aa7.24□□□□□ -1.25
SNX13-213ENST00000611725 GNA11P29992 359 aa7.24□□□□□ -1.25
SNX13-213ENST00000611725 SPECC1LQ69YQ0 1117 aa7.24□□□□□ -1.25
SNX13-213ENST00000611725 ZSWIM4Q9H7M6 989 aa7.24□□□□□ -1.25
SNX13-213ENST00000611725 C6orf50Q9HD87 102 aa7.24□□□□□ -1.25
SNX13-213ENST00000611725 NEDD4P46934 1319 aa7.24□□□□□ -1.25
SNX13-213ENST00000611725 CYP2D7A0A087X1C5 515 aa7.24□□□□□ -1.25
SNX13-213ENST00000611725 ERCC5P28715 1186 aaPredicted RBP7.24□□□□□ -1.25
SNX13-213ENST00000611725 SAMD1Q6SPF0 538 aaPredicted RBP7.24□□□□□ -1.25
SNX13-213ENST00000611725 TEX11Q8IYF3 940 aa7.24□□□□□ -1.25
SNX13-213ENST00000611725 PRDM10Q9NQV6 1147 aa7.24□□□□□ -1.25
SNX13-213ENST00000611725 HPS5Q9UPZ3 1129 aa7.24□□□□□ -1.25
SNX13-213ENST00000611725 SLFN14P0C7P3 912 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms