RNA–Protein interactions for RNA: ENST00000604030.6

SH3D19-211, Transcript of SH3 domain containing 19, humanhuman

TSL 5 BASIC

Gene SH3D19, Length 5,228 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-211ENST00000604030 MRFAP1L1Q96HT8 127 aa23.53■■□□□ 1.36
SH3D19-211ENST00000604030 ABCC4O15439 1325 aa23.53■■□□□ 1.36
SH3D19-211ENST00000604030 DCAF17Q5H9S7 520 aaPredicted RBP23.52■■□□□ 1.36
SH3D19-211ENST00000604030 TRIML1Q8N9V2 468 aa23.52■■□□□ 1.36
SH3D19-211ENST00000604030 SPOPO43791 374 aa23.52■■□□□ 1.36
SH3D19-211ENST00000604030 MAGEA1P43355 309 aa23.52■■□□□ 1.36
SH3D19-211ENST00000604030 PPP2R5EQ16537 467 aa23.52■■□□□ 1.36
SH3D19-211ENST00000604030 APBB1IPQ7Z5R6 666 aaPredicted RBP23.52■■□□□ 1.36
SH3D19-211ENST00000604030 MAIP1Q8WWC4 291 aa23.52■■□□□ 1.36
SH3D19-211ENST00000604030 TMEM63CQ9P1W3 806 aa23.52■■□□□ 1.36
SH3D19-211ENST00000604030 ZNF608Q9ULD9 1512 aaPredicted RBP23.52■■□□□ 1.36
SH3D19-211ENST00000604030 WDR44Q5JSH3 913 aa23.52■■□□□ 1.36
SH3D19-211ENST00000604030 ZNF274Q96GC6 653 aaPredicted RBP23.52■■□□□ 1.36
SH3D19-211ENST00000604030 KIAA0556O60303 1618 aa23.52■■□□□ 1.36
SH3D19-211ENST00000604030 PLXNC1O60486 1568 aa23.52■■□□□ 1.36
SH3D19-211ENST00000604030 WDR7Q9Y4E6 1490 aa23.52■■□□□ 1.36
SH3D19-211ENST00000604030 CEBPAP49715 358 aaPredicted RBP23.52■■□□□ 1.36
SH3D19-211ENST00000604030 ARHGAP24Q8N264 748 aa23.52■■□□□ 1.36
SH3D19-211ENST00000604030 FAM169AQ9Y6X4 670 aa23.52■■□□□ 1.36
SH3D19-211ENST00000604030 LIN9Q5TKA1 542 aa23.51■■□□□ 1.35
SH3D19-211ENST00000604030 KRT40Q6A162 431 aa23.51■■□□□ 1.35
SH3D19-211ENST00000604030 EYA3Q99504 573 aa23.51■■□□□ 1.35
SH3D19-211ENST00000604030 EXOC7Q9UPT5 735 aa23.51■■□□□ 1.35
SH3D19-211ENST00000604030 MAST1Q9Y2H9 1570 aa23.51■■□□□ 1.35
SH3D19-211ENST00000604030 GPAA1O43292 621 aa23.51■■□□□ 1.35
SH3D19-211ENST00000604030 DKC1O60832 514 aaKnown RBP eCLIP23.51■■□□□ 1.35
SH3D19-211ENST00000604030 FLOT1O75955 427 aa23.51■■□□□ 1.35
SH3D19-211ENST00000604030 GJC1P36383 396 aa23.51■■□□□ 1.35
SH3D19-211ENST00000604030 ERCC6LQ2NKX8 1250 aa23.51■■□□□ 1.35
SH3D19-211ENST00000604030 TRMT1LQ7Z2T5 733 aaKnown RBP23.51■■□□□ 1.35
SH3D19-211ENST00000604030 DBNDD2Q9BQY9 259 aa23.51■■□□□ 1.35
SH3D19-211ENST00000604030 ATP5JP18859 108 aa23.51■■□□□ 1.35
SH3D19-211ENST00000604030 RXRAP19793 462 aa23.51■■□□□ 1.35
SH3D19-211ENST00000604030 GBP1P32455 592 aa23.51■■□□□ 1.35
SH3D19-211ENST00000604030 SMIM23A6NLE4 172 aa23.5■■□□□ 1.35
SH3D19-211ENST00000604030 PARP2Q9UGN5 583 aa23.5■■□□□ 1.35
SH3D19-211ENST00000604030 CFAP157Q5JU67 520 aa23.5■■□□□ 1.35
SH3D19-211ENST00000604030 PICALMQ13492 652 aa23.5■■□□□ 1.35
SH3D19-211ENST00000604030 TTLL12Q14166 644 aaPredicted RBP23.5■■□□□ 1.35
SH3D19-211ENST00000604030 UTP14CQ5TAP6 766 aaKnown RBP23.5■■□□□ 1.35
SH3D19-211ENST00000604030 CCDC160A6NGH7 325 aa23.5■■□□□ 1.35
SH3D19-211ENST00000604030 GADD45BO75293 160 aaPredicted RBP23.5■■□□□ 1.35
SH3D19-211ENST00000604030 ZNF365Q70YC5 407 aa23.5■■□□□ 1.35
SH3D19-211ENST00000604030 CDC37L1Q7L3B6 337 aa23.5■■□□□ 1.35
SH3D19-211ENST00000604030 GNA14O95837 355 aa23.49■■□□□ 1.35
SH3D19-211ENST00000604030 OAS2P29728 719 aaKnown RBP23.49■■□□□ 1.35
SH3D19-211ENST00000604030 NONOQ15233 471 aaKnown RBP eCLIP23.49■■□□□ 1.35
SH3D19-211ENST00000604030 ZC3H12CQ9C0D7 883 aaKnown RBP23.49■■□□□ 1.35
SH3D19-211ENST00000604030 ARHGEF10O15013 1369 aa23.49■■□□□ 1.35
SH3D19-211ENST00000604030 ZNF790Q6PG37 636 aa23.49■■□□□ 1.35
SH3D19-211ENST00000604030 FAM135BQ49AJ0 1406 aa23.49■■□□□ 1.35
SH3D19-211ENST00000604030 PIK3AP1Q6ZUJ8 805 aa23.49■■□□□ 1.35
SH3D19-211ENST00000604030 ZNF622Q969S3 477 aaKnown RBP eCLIP23.49■■□□□ 1.35
SH3D19-211ENST00000604030 GCP02774 474 aa23.48■■□□□ 1.35
SH3D19-211ENST00000604030 XAGE2Q96GT9 111 aa23.48■■□□□ 1.35
SH3D19-211ENST00000604030 FAM184BQ9ULE4 1060 aa23.48■■□□□ 1.35
SH3D19-211ENST00000604030 SMTNP53814 917 aa23.48■■□□□ 1.35
SH3D19-211ENST00000604030 FAM227BQ96M60 508 aa23.48■■□□□ 1.35
SH3D19-211ENST00000604030 KIAA1468Q9P260 1216 aa23.48■■□□□ 1.35
SH3D19-211ENST00000604030 UTP18Q9Y5J1 556 aaKnown RBP eCLIP23.48■■□□□ 1.35
SH3D19-211ENST00000604030 ASXL2Q76L83 1435 aa23.48■■□□□ 1.35
SH3D19-211ENST00000604030 MAK16Q9BXY0 300 aaKnown RBP23.48■■□□□ 1.35
SH3D19-211ENST00000604030 STX10O60499 249 aa23.48■■□□□ 1.35
SH3D19-211ENST00000604030 TSNAXIP1Q2TAA8 658 aa23.48■■□□□ 1.35
SH3D19-211ENST00000604030 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.48■■□□□ 1.35
SH3D19-211ENST00000604030 KDM5DQ9BY66 1539 aa23.48■■□□□ 1.35
SH3D19-211ENST00000604030 EFCAB8A8MWE9 144 aa23.47■■□□□ 1.35
SH3D19-211ENST00000604030 CABS1Q96KC9 395 aa23.47■■□□□ 1.35
SH3D19-211ENST00000604030 FEZ2Q9UHY8 353 aaPredicted RBP23.47■■□□□ 1.35
SH3D19-211ENST00000604030 PDE8AO60658 829 aa23.47■■□□□ 1.35
SH3D19-211ENST00000604030 HPDP32754 393 aaPredicted RBP23.47■■□□□ 1.35
SH3D19-211ENST00000604030 LRRC59Q96AG4 307 aaKnown RBP23.47■■□□□ 1.35
SH3D19-211ENST00000604030 BCL2L12Q9HB09 334 aa23.47■■□□□ 1.35
SH3D19-211ENST00000604030 RGS12O14924 1447 aa23.47■■□□□ 1.35
SH3D19-211ENST00000604030 DDX23Q9BUQ8 820 aaKnown RBP23.47■■□□□ 1.35
SH3D19-211ENST00000604030 V9GY48 417 aaPredicted RBP23.47■■□□□ 1.35
SH3D19-211ENST00000604030 SNX16P57768 344 aa23.47■■□□□ 1.35
SH3D19-211ENST00000604030 TRIM58Q8NG06 486 aa23.47■■□□□ 1.35
SH3D19-211ENST00000604030 ZKSCAN3Q9BRR0 538 aa23.47■■□□□ 1.35
SH3D19-211ENST00000604030 MYSM1Q5VVJ2 828 aa23.46■■□□□ 1.35
SH3D19-211ENST00000604030 RAB17Q9H0T7 212 aa23.46■■□□□ 1.35
SH3D19-211ENST00000604030 SH3TC1Q8TE82 1336 aa23.46■■□□□ 1.35
SH3D19-211ENST00000604030 RBM6P78332 1123 aaKnown RBP23.46■■□□□ 1.35
SH3D19-211ENST00000604030 NEDD9Q14511 834 aa23.46■■□□□ 1.35
SH3D19-211ENST00000604030 NAA25Q14CX7 972 aa23.46■■□□□ 1.35
SH3D19-211ENST00000604030 ATP8B1O43520 1251 aa23.46■■□□□ 1.35
SH3D19-211ENST00000604030 RPS6KA1Q15418 735 aa23.46■■□□□ 1.35
SH3D19-211ENST00000604030 LPIN2Q92539 896 aa23.46■■□□□ 1.35
SH3D19-211ENST00000604030 KIF21AQ7Z4S6 1674 aa23.46■■□□□ 1.35
SH3D19-211ENST00000604030 PSDA5PKW4 1024 aaPredicted RBP23.46■■□□□ 1.35
SH3D19-211ENST00000604030 FNBP1Q96RU3 617 aa23.46■■□□□ 1.35
SH3D19-211ENST00000604030 XPO4Q9C0E2 1151 aaKnown RBP23.46■■□□□ 1.35
SH3D19-211ENST00000604030 NCOA5Q9HCD5 579 aaKnown RBP23.46■■□□□ 1.35
SH3D19-211ENST00000604030 MAST3O60307 1309 aa23.45■■□□□ 1.34
SH3D19-211ENST00000604030 DDB1Q16531 1140 aa23.45■■□□□ 1.34
SH3D19-211ENST00000604030 GABPB2Q8TAK5 448 aaPredicted RBP23.45■■□□□ 1.34
SH3D19-211ENST00000604030 SAR1BQ9Y6B6 198 aa23.45■■□□□ 1.34
SH3D19-211ENST00000604030 IGSF3O75054 1194 aa23.45■■□□□ 1.34
SH3D19-211ENST00000604030 WDR66Q8TBY9 1149 aa23.45■■□□□ 1.34
SH3D19-211ENST00000604030 NELFBQ8WX92 580 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms