RNA–Protein interactions for RNA: ENST00000568310.1

DNAAF4-CCPG1-202, Transcript of DNAAF4-CCPG1 readthrough (NMD candidate), humanhuman

TSL 2

Gene DNAAF4-CCPG1, Length 1,293 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF4-CCPG1-202ENST00000568310 PCDHA4Q9UN74 947 aa12□□□□□ -0.49
DNAAF4-CCPG1-202ENST00000568310 CSADQ9Y600 493 aa12□□□□□ -0.49
DNAAF4-CCPG1-202ENST00000568310 DCDC2CA8MYV0 355 aa11.99□□□□□ -0.49
DNAAF4-CCPG1-202ENST00000568310 PRNPP04156 253 aa11.99□□□□□ -0.49
DNAAF4-CCPG1-202ENST00000568310 FAM87AP0C7U9 286 aa11.99□□□□□ -0.49
DNAAF4-CCPG1-202ENST00000568310 PPM1JQ5JR12 505 aa11.99□□□□□ -0.49
DNAAF4-CCPG1-202ENST00000568310 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.99□□□□□ -0.49
DNAAF4-CCPG1-202ENST00000568310 CCDC39Q9UFE4 941 aa11.99□□□□□ -0.49
DNAAF4-CCPG1-202ENST00000568310 C12orf40Q86WS4 652 aa11.98□□□□□ -0.49
DNAAF4-CCPG1-202ENST00000568310 PICK1Q9NRD5 415 aa11.98□□□□□ -0.49
DNAAF4-CCPG1-202ENST00000568310 GRIN2BQ13224 1484 aa11.97□□□□□ -0.49
DNAAF4-CCPG1-202ENST00000568310 VSIG10LQ86VR7 867 aa11.97□□□□□ -0.49
DNAAF4-CCPG1-202ENST00000568310 WDR97A6NE52 1622 aa11.97□□□□□ -0.49
DNAAF4-CCPG1-202ENST00000568310 RING1Q06587 406 aa11.96□□□□□ -0.49
DNAAF4-CCPG1-202ENST00000568310 CCDC85BQ15834 202 aaPredicted RBP11.96□□□□□ -0.49
DNAAF4-CCPG1-202ENST00000568310 TTBK2Q6IQ55 1244 aa11.96□□□□□ -0.49
DNAAF4-CCPG1-202ENST00000568310 PSMG3-AS1Q96PY0 264 aa11.96□□□□□ -0.49
DNAAF4-CCPG1-202ENST00000568310 PARP2Q9UGN5 583 aa11.96□□□□□ -0.49
DNAAF4-CCPG1-202ENST00000568310 ARAP1Q96P48 1450 aa11.95□□□□□ -0.5
DNAAF4-CCPG1-202ENST00000568310 MAGI1Q96QZ7 1491 aaPredicted RBP11.95□□□□□ -0.5
DNAAF4-CCPG1-202ENST00000568310 IRAK1P51617 712 aa11.95□□□□□ -0.5
DNAAF4-CCPG1-202ENST00000568310 DUSP23Q9BVJ7 150 aa11.95□□□□□ -0.5
DNAAF4-CCPG1-202ENST00000568310 GAPVD1Q14C86 1478 aa11.95□□□□□ -0.5
DNAAF4-CCPG1-202ENST00000568310 FANCGO15287 622 aa11.94□□□□□ -0.5
DNAAF4-CCPG1-202ENST00000568310 LEFTY1O75610 366 aa11.94□□□□□ -0.5
DNAAF4-CCPG1-202ENST00000568310 NTF4P34130 210 aa11.94□□□□□ -0.5
DNAAF4-CCPG1-202ENST00000568310 ELMO3Q96BJ8 720 aa11.94□□□□□ -0.5
DNAAF4-CCPG1-202ENST00000568310 DAB2P98082 770 aa11.93□□□□□ -0.5
DNAAF4-CCPG1-202ENST00000568310 PTPN11Q06124 597 aaPredicted RBP11.93□□□□□ -0.5
DNAAF4-CCPG1-202ENST00000568310 PSMD2Q13200 908 aa11.93□□□□□ -0.5
DNAAF4-CCPG1-202ENST00000568310 MCTP1Q6DN14 999 aa11.93□□□□□ -0.5
DNAAF4-CCPG1-202ENST00000568310 FBXL18Q96ME1 805 aa11.93□□□□□ -0.5
DNAAF4-CCPG1-202ENST00000568310 GZF1Q9H116 711 aaPredicted RBP11.93□□□□□ -0.5
DNAAF4-CCPG1-202ENST00000568310 SYNJ2O15056 1496 aa11.93□□□□□ -0.5
DNAAF4-CCPG1-202ENST00000568310 COL17A1Q9UMD9 1497 aaPredicted RBP11.92□□□□□ -0.5
DNAAF4-CCPG1-202ENST00000568310 XPCQ01831 940 aaPredicted RBP11.92□□□□□ -0.5
DNAAF4-CCPG1-202ENST00000568310 INPP5AQ14642 412 aa11.92□□□□□ -0.5
DNAAF4-CCPG1-202ENST00000568310 ZBTB37Q5TC79 503 aa11.92□□□□□ -0.5
DNAAF4-CCPG1-202ENST00000568310 KRTAP4-8Q9BYQ9 185 aa11.92□□□□□ -0.5
DNAAF4-CCPG1-202ENST00000568310 SYNJ1O43426 1573 aa11.92□□□□□ -0.5
DNAAF4-CCPG1-202ENST00000568310 CLASP1Q7Z460 1538 aa11.91□□□□□ -0.5
DNAAF4-CCPG1-202ENST00000568310 ABCA10Q8WWZ4 1543 aa11.91□□□□□ -0.5
DNAAF4-CCPG1-202ENST00000568310 PBRM1Q86U86 1689 aa11.91□□□□□ -0.5
DNAAF4-CCPG1-202ENST00000568310 RPS26P62854 115 aaKnown RBP11.91□□□□□ -0.5
DNAAF4-CCPG1-202ENST00000568310 CCDC27Q2M243 656 aa11.91□□□□□ -0.5
DNAAF4-CCPG1-202ENST00000568310 NFXL1Q6ZNB6 911 aa11.91□□□□□ -0.5
DNAAF4-CCPG1-202ENST00000568310 CDC37L1Q7L3B6 337 aa11.91□□□□□ -0.5
DNAAF4-CCPG1-202ENST00000568310 FBXO33Q7Z6M2 555 aa11.91□□□□□ -0.5
DNAAF4-CCPG1-202ENST00000568310 TOP6BLQ8N6T0 577 aa11.91□□□□□ -0.5
DNAAF4-CCPG1-202ENST00000568310 GAL3ST3Q96A11 431 aa11.91□□□□□ -0.5
DNAAF4-CCPG1-202ENST00000568310 MEI1Q5TIA1 1274 aa11.9□□□□□ -0.5
DNAAF4-CCPG1-202ENST00000568310 LRFN4Q6PJG9 635 aa11.9□□□□□ -0.5
DNAAF4-CCPG1-202ENST00000568310 HDXQ7Z353 690 aa11.9□□□□□ -0.5
DNAAF4-CCPG1-202ENST00000568310 TP53INP2Q8IXH6 220 aa11.9□□□□□ -0.5
DNAAF4-CCPG1-202ENST00000568310 FAM181AQ8N9Y4 354 aa11.9□□□□□ -0.5
DNAAF4-CCPG1-202ENST00000568310 KCT2Q8NC54 265 aa11.9□□□□□ -0.5
DNAAF4-CCPG1-202ENST00000568310 WRNQ14191 1432 aaPredicted RBP eCLIP11.89□□□□□ -0.51
DNAAF4-CCPG1-202ENST00000568310 LMNB1P20700 586 aa11.89□□□□□ -0.51
DNAAF4-CCPG1-202ENST00000568310 TMC4Q7Z404 712 aa11.89□□□□□ -0.51
DNAAF4-CCPG1-202ENST00000568310 UBE3DQ7Z6J8 389 aa11.89□□□□□ -0.51
DNAAF4-CCPG1-202ENST00000568310 ABI1Q8IZP0 508 aa11.89□□□□□ -0.51
DNAAF4-CCPG1-202ENST00000568310 FLCNQ8NFG4 579 aa11.89□□□□□ -0.51
DNAAF4-CCPG1-202ENST00000568310 NETO1Q8TDF5 533 aa11.89□□□□□ -0.51
DNAAF4-CCPG1-202ENST00000568310 PLPPR2Q96GM1 343 aa11.89□□□□□ -0.51
DNAAF4-CCPG1-202ENST00000568310 ABCA5Q8WWZ7 1642 aa11.89□□□□□ -0.51
DNAAF4-CCPG1-202ENST00000568310 PRAMEF27A3QJZ7 478 aa11.88□□□□□ -0.51
DNAAF4-CCPG1-202ENST00000568310 ERCC3P19447 782 aa11.88□□□□□ -0.51
DNAAF4-CCPG1-202ENST00000568310 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.88□□□□□ -0.51
DNAAF4-CCPG1-202ENST00000568310 CYFIP1Q7L576 1253 aa11.88□□□□□ -0.51
DNAAF4-CCPG1-202ENST00000568310 PLD6Q8N2A8 252 aaKnown RBP11.88□□□□□ -0.51
DNAAF4-CCPG1-202ENST00000568310 ZNF507Q8TCN5 953 aa11.88□□□□□ -0.51
DNAAF4-CCPG1-202ENST00000568310 FAM161BQ96MY7 647 aa11.88□□□□□ -0.51
DNAAF4-CCPG1-202ENST00000568310 SNCAIPQ9Y6H5 919 aa11.88□□□□□ -0.51
DNAAF4-CCPG1-202ENST00000568310 LIG3P49916 1009 aa11.87□□□□□ -0.51
DNAAF4-CCPG1-202ENST00000568310 TAF1CQ15572 869 aaPredicted RBP11.87□□□□□ -0.51
DNAAF4-CCPG1-202ENST00000568310 MAP3K11Q16584 847 aa11.87□□□□□ -0.51
DNAAF4-CCPG1-202ENST00000568310 AGMOQ6ZNB7 445 aa11.87□□□□□ -0.51
DNAAF4-CCPG1-202ENST00000568310 ARHGAP27Q6ZUM4 889 aa11.87□□□□□ -0.51
DNAAF4-CCPG1-202ENST00000568310 MKNK2Q9HBH9 465 aa11.87□□□□□ -0.51
DNAAF4-CCPG1-202ENST00000568310 PRDM10Q9NQV6 1147 aa11.87□□□□□ -0.51
DNAAF4-CCPG1-202ENST00000568310 ADGRE2Q9UHX3 823 aa11.87□□□□□ -0.51
DNAAF4-CCPG1-202ENST00000568310 SLC5A6Q9Y289 635 aa11.87□□□□□ -0.51
DNAAF4-CCPG1-202ENST00000568310 TAL1P17542 331 aaPredicted RBP11.86□□□□□ -0.51
DNAAF4-CCPG1-202ENST00000568310 STK11IPQ8N1F8 1099 aa11.86□□□□□ -0.51
DNAAF4-CCPG1-202ENST00000568310 BCL7CQ8WUZ0 217 aaPredicted RBP11.86□□□□□ -0.51
DNAAF4-CCPG1-202ENST00000568310 PAK6Q9NQU5 681 aaPredicted RBP11.86□□□□□ -0.51
DNAAF4-CCPG1-202ENST00000568310 PCDHB5Q9Y5E4 795 aa11.86□□□□□ -0.51
DNAAF4-CCPG1-202ENST00000568310 U3KQE9 123 aa11.86□□□□□ -0.51
DNAAF4-CCPG1-202ENST00000568310 TOP2BQ02880 1626 aa11.86□□□□□ -0.51
DNAAF4-CCPG1-202ENST00000568310 ST13P50502 369 aaKnown RBP11.85□□□□□ -0.51
DNAAF4-CCPG1-202ENST00000568310 WIPI1Q5MNZ9 446 aaPredicted RBP11.85□□□□□ -0.51
DNAAF4-CCPG1-202ENST00000568310 AGBL5Q8NDL9 886 aa11.85□□□□□ -0.51
DNAAF4-CCPG1-202ENST00000568310 MISP3Q96FF7 219 aa11.85□□□□□ -0.51
DNAAF4-CCPG1-202ENST00000568310 BIVM-ERCC5R4GMW8 1640 aa11.85□□□□□ -0.51
DNAAF4-CCPG1-202ENST00000568310 CTSHP09668 335 aa11.84□□□□□ -0.51
DNAAF4-CCPG1-202ENST00000568310 RLBP1P12271 317 aa11.84□□□□□ -0.51
DNAAF4-CCPG1-202ENST00000568310 CDK8P49336 464 aa11.84□□□□□ -0.51
DNAAF4-CCPG1-202ENST00000568310 OXCT1P55809 520 aa11.84□□□□□ -0.51
DNAAF4-CCPG1-202ENST00000568310 SEPT6Q14141 434 aa11.84□□□□□ -0.51
DNAAF4-CCPG1-202ENST00000568310 NOC4LQ9BVI4 516 aaKnown RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms