RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 NECAB2Q7Z6G3 386 aa13□□□□□ -0.33
CDC42BPB-207ENST00000560492 LRCH3Q96II8 777 aa13□□□□□ -0.33
CDC42BPB-207ENST00000560492 IDI2Q9BXS1 227 aa13□□□□□ -0.33
CDC42BPB-207ENST00000560492 XRN2Q9H0D6 950 aaKnown RBP eCLIP13□□□□□ -0.33
CDC42BPB-207ENST00000560492 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13□□□□□ -0.33
CDC42BPB-207ENST00000560492 FBXO3Q9UK99 471 aa13□□□□□ -0.33
CDC42BPB-207ENST00000560492 AGTPBP1Q9UPW5 1226 aa13□□□□□ -0.33
CDC42BPB-207ENST00000560492 SLC45A1Q9Y2W3 748 aa13□□□□□ -0.33
CDC42BPB-207ENST00000560492 RANBP2P49792 3224 aaKnown RBP12.99□□□□□ -0.33
CDC42BPB-207ENST00000560492 ATRNL1Q5VV63 1379 aa12.99□□□□□ -0.33
CDC42BPB-207ENST00000560492 MROH7-TTC4A0A0A0MT08 1334 aa12.99□□□□□ -0.33
CDC42BPB-207ENST00000560492 E9PSI1 815 aa12.99□□□□□ -0.33
CDC42BPB-207ENST00000560492 IRF5Q13568 498 aa12.99□□□□□ -0.33
CDC42BPB-207ENST00000560492 TREML2Q5T2D2 321 aa12.99□□□□□ -0.33
CDC42BPB-207ENST00000560492 GORABQ5T7V8 394 aa12.99□□□□□ -0.33
CDC42BPB-207ENST00000560492 ERICH6Q7L0X2 663 aa12.99□□□□□ -0.33
CDC42BPB-207ENST00000560492 SH3BP5LQ7L8J4 393 aa12.99□□□□□ -0.33
CDC42BPB-207ENST00000560492 DDX4Q9NQI0 724 aaKnown RBP12.99□□□□□ -0.33
CDC42BPB-207ENST00000560492 ZMYND8Q9ULU4 1186 aaPredicted RBP12.99□□□□□ -0.33
CDC42BPB-207ENST00000560492 HDAC5Q9UQL6 1122 aa12.99□□□□□ -0.33
CDC42BPB-207ENST00000560492 LOC285556D6RIA3 1793 aa12.99□□□□□ -0.33
CDC42BPB-207ENST00000560492 DDX60LQ5H9U9 1706 aaKnown RBP12.99□□□□□ -0.33
CDC42BPB-207ENST00000560492 GAKO14976 1311 aa12.98□□□□□ -0.33
CDC42BPB-207ENST00000560492 A0A1W2PPC1 479 aa12.98□□□□□ -0.33
CDC42BPB-207ENST00000560492 SPP2Q13103 211 aa12.98□□□□□ -0.33
CDC42BPB-207ENST00000560492 PABPC4Q13310 644 aaKnown RBP eCLIP12.98□□□□□ -0.33
CDC42BPB-207ENST00000560492 RASGRF1Q13972 1273 aa12.98□□□□□ -0.33
CDC42BPB-207ENST00000560492 FAM110CQ1W6H9 321 aa12.98□□□□□ -0.33
CDC42BPB-207ENST00000560492 DIS3LQ8TF46 1054 aaKnown RBP12.98□□□□□ -0.33
CDC42BPB-207ENST00000560492 NEUROD6Q96NK8 337 aa12.98□□□□□ -0.33
CDC42BPB-207ENST00000560492 NOL10Q9BSC4 688 aaKnown RBP12.98□□□□□ -0.33
CDC42BPB-207ENST00000560492 SOX1O00570 391 aaPredicted RBP12.97□□□□□ -0.33
CDC42BPB-207ENST00000560492 HMGCRP04035 888 aa12.97□□□□□ -0.33
CDC42BPB-207ENST00000560492 CAPN2P17655 700 aa12.97□□□□□ -0.33
CDC42BPB-207ENST00000560492 HMGCS2P54868 508 aa12.97□□□□□ -0.33
CDC42BPB-207ENST00000560492 TIMM10P62072 90 aa12.97□□□□□ -0.33
CDC42BPB-207ENST00000560492 MECOMQ03112 1051 aa12.97□□□□□ -0.33
CDC42BPB-207ENST00000560492 MVPQ14764 893 aaKnown RBP12.97□□□□□ -0.33
CDC42BPB-207ENST00000560492 CCAR1Q8IX12 1150 aaKnown RBP12.97□□□□□ -0.33
CDC42BPB-207ENST00000560492 PROCA1Q8NCQ7 364 aaPredicted RBP12.97□□□□□ -0.33
CDC42BPB-207ENST00000560492 PRO3102Q9H379 93 aa12.97□□□□□ -0.33
CDC42BPB-207ENST00000560492 HMX1Q9NP08 348 aaPredicted RBP12.97□□□□□ -0.33
CDC42BPB-207ENST00000560492 PAK6Q9NQU5 681 aaPredicted RBP12.97□□□□□ -0.33
CDC42BPB-207ENST00000560492 RFX7Q2KHR2 1363 aa12.96□□□□□ -0.33
CDC42BPB-207ENST00000560492 A0A1B0GUL7 405 aa12.96□□□□□ -0.33
CDC42BPB-207ENST00000560492 LDHCP07864 332 aa12.96□□□□□ -0.33
CDC42BPB-207ENST00000560492 SYN1P17600 705 aa12.96□□□□□ -0.33
CDC42BPB-207ENST00000560492 GCLCP48506 637 aaPredicted RBP12.96□□□□□ -0.33
CDC42BPB-207ENST00000560492 IRX3P78415 501 aaPredicted RBP12.96□□□□□ -0.33
CDC42BPB-207ENST00000560492 GSTO1P78417 241 aa12.96□□□□□ -0.33
CDC42BPB-207ENST00000560492 ALDH1L2Q3SY69 923 aa12.96□□□□□ -0.33
CDC42BPB-207ENST00000560492 ZNF280CQ8ND82 737 aa12.96□□□□□ -0.33
CDC42BPB-207ENST00000560492 XAGE2Q96GT9 111 aa12.96□□□□□ -0.33
CDC42BPB-207ENST00000560492 TRIM34Q9BYJ4 488 aa12.96□□□□□ -0.33
CDC42BPB-207ENST00000560492 OSBPL5Q9H0X9 879 aaPredicted RBP12.96□□□□□ -0.33
CDC42BPB-207ENST00000560492 AS3MTQ9HBK9 375 aa12.96□□□□□ -0.33
CDC42BPB-207ENST00000560492 CWC22Q9HCG8 908 aaKnown RBP12.96□□□□□ -0.33
CDC42BPB-207ENST00000560492 RAI14Q9P0K7 980 aa12.96□□□□□ -0.33
CDC42BPB-207ENST00000560492 AKAP2Q9Y2D5 859 aa12.96□□□□□ -0.33
CDC42BPB-207ENST00000560492 ZNF521Q96K83 1311 aa12.95□□□□□ -0.34
CDC42BPB-207ENST00000560492 TFCP2Q12800 502 aa12.95□□□□□ -0.34
CDC42BPB-207ENST00000560492 TEX11Q8IYF3 940 aa12.95□□□□□ -0.34
CDC42BPB-207ENST00000560492 NBPF3Q9H094 633 aa12.95□□□□□ -0.34
CDC42BPB-207ENST00000560492 CRISPLD2Q9H0B8 497 aa12.95□□□□□ -0.34
CDC42BPB-207ENST00000560492 ASCC2Q9H1I8 757 aaPredicted RBP12.95□□□□□ -0.34
CDC42BPB-207ENST00000560492 TMOD4Q9NZQ9 345 aa12.95□□□□□ -0.34
CDC42BPB-207ENST00000560492 RPTORQ8N122 1335 aa12.94□□□□□ -0.34
CDC42BPB-207ENST00000560492 USP17L5A8MUK1 530 aa12.94□□□□□ -0.34
CDC42BPB-207ENST00000560492 SRGAP3O43295 1099 aa12.94□□□□□ -0.34
CDC42BPB-207ENST00000560492 CYP2B6P20813 491 aa12.94□□□□□ -0.34
CDC42BPB-207ENST00000560492 TRIM32Q13049 653 aa12.94□□□□□ -0.34
CDC42BPB-207ENST00000560492 DEFB123Q8N688 67 aa12.94□□□□□ -0.34
CDC42BPB-207ENST00000560492 ANKLE1Q8NAG6 615 aa12.94□□□□□ -0.34
CDC42BPB-207ENST00000560492 API5Q9BZZ5 524 aaKnown RBP12.94□□□□□ -0.34
CDC42BPB-207ENST00000560492 C11orf49Q9H6J7 331 aa12.94□□□□□ -0.34
CDC42BPB-207ENST00000560492 LRP2BPQ9P2M1 347 aa12.94□□□□□ -0.34
CDC42BPB-207ENST00000560492 NOB1Q9ULX3 412 aaKnown RBP12.94□□□□□ -0.34
CDC42BPB-207ENST00000560492 PLXNB2O15031 1838 aa12.94□□□□□ -0.34
CDC42BPB-207ENST00000560492 PDS5AQ29RF7 1337 aaKnown RBP12.93□□□□□ -0.34
CDC42BPB-207ENST00000560492 GPR75-ASB3A0A0A6YYF3 556 aa12.93□□□□□ -0.34
CDC42BPB-207ENST00000560492 TBC1D12O60347 775 aa12.93□□□□□ -0.34
CDC42BPB-207ENST00000560492 CAP2P40123 477 aa12.93□□□□□ -0.34
CDC42BPB-207ENST00000560492 RHBDL3P58872 404 aa12.93□□□□□ -0.34
CDC42BPB-207ENST00000560492 MAP3K10Q02779 954 aa12.93□□□□□ -0.34
CDC42BPB-207ENST00000560492 MTMR2Q13614 643 aa12.93□□□□□ -0.34
CDC42BPB-207ENST00000560492 PDE3AQ14432 1141 aa12.93□□□□□ -0.34
CDC42BPB-207ENST00000560492 PI16Q6UXB8 463 aa12.93□□□□□ -0.34
CDC42BPB-207ENST00000560492 TBC1D9Q6ZT07 1266 aa12.93□□□□□ -0.34
CDC42BPB-207ENST00000560492 CRACR2BQ8N4Y2 399 aaPredicted RBP12.93□□□□□ -0.34
CDC42BPB-207ENST00000560492 FAM163AQ96GL9 167 aaPredicted RBP12.93□□□□□ -0.34
CDC42BPB-207ENST00000560492 MEIS3Q99687 375 aa12.93□□□□□ -0.34
CDC42BPB-207ENST00000560492 TBC1D2Q9BYX2 928 aa12.93□□□□□ -0.34
CDC42BPB-207ENST00000560492 COPRSQ9NQ92 184 aa12.93□□□□□ -0.34
CDC42BPB-207ENST00000560492 CDK5RAP2Q96SN8 1893 aa12.93□□□□□ -0.34
CDC42BPB-207ENST00000560492 COL6A3P12111 3177 aa12.93□□□□□ -0.34
CDC42BPB-207ENST00000560492 MAST2Q6P0Q8 1798 aa12.92□□□□□ -0.34
CDC42BPB-207ENST00000560492 ZNF316A6NFI3 1004 aaPredicted RBP12.92□□□□□ -0.34
CDC42BPB-207ENST00000560492 SLFN5Q08AF3 891 aa12.92□□□□□ -0.34
CDC42BPB-207ENST00000560492 Q7L0L9 218 aa12.92□□□□□ -0.34
CDC42BPB-207ENST00000560492 SPATA5Q8NB90 893 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms