RNA–Protein interactions for RNA: ENST00000558845.1

HMG20A-206, Transcript of high mobility group 20A, humanhuman

TSL 2

Gene HMG20A, Length 644 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-206ENST00000558845 YBX3P16989 372 aaKnown RBP eCLIP13.26□□□□□ -0.29
HMG20A-206ENST00000558845 FLT1P17948 1338 aa13.26□□□□□ -0.29
HMG20A-206ENST00000558845 USP5P45974 858 aa13.26□□□□□ -0.29
HMG20A-206ENST00000558845 SCNN1DP51172 638 aa13.26□□□□□ -0.29
HMG20A-206ENST00000558845 ZNF280AP59817 542 aaPredicted RBP13.26□□□□□ -0.29
HMG20A-206ENST00000558845 EXOSC10Q01780 885 aaKnown RBP13.26□□□□□ -0.29
HMG20A-206ENST00000558845 ANKRD1Q15327 319 aa13.26□□□□□ -0.29
HMG20A-206ENST00000558845 C12orf60Q5U649 245 aa13.26□□□□□ -0.29
HMG20A-206ENST00000558845 CDC42EP5Q6NZY7 148 aa13.26□□□□□ -0.29
HMG20A-206ENST00000558845 ARHGAP27Q6ZUM4 889 aa13.26□□□□□ -0.29
HMG20A-206ENST00000558845 TBC1D10CQ8IV04 446 aa13.26□□□□□ -0.29
HMG20A-206ENST00000558845 MB21D2Q8IYB1 491 aaPredicted RBP13.26□□□□□ -0.29
HMG20A-206ENST00000558845 OGFOD1Q8N543 542 aa13.26□□□□□ -0.29
HMG20A-206ENST00000558845 NAV1Q8NEY1 1877 aa13.26□□□□□ -0.29
HMG20A-206ENST00000558845 ZBED3Q96IU2 234 aaPredicted RBP13.26□□□□□ -0.29
HMG20A-206ENST00000558845 UPF3BQ9BZI7 483 aaKnown RBP13.26□□□□□ -0.29
HMG20A-206ENST00000558845 KRT23Q9C075 422 aa13.26□□□□□ -0.29
HMG20A-206ENST00000558845 ZC3H4Q9UPT8 1303 aaKnown RBP13.26□□□□□ -0.29
HMG20A-206ENST00000558845 PCDHB13Q9Y5F0 798 aa13.26□□□□□ -0.29
HMG20A-206ENST00000558845 USP17L12C9JPN9 530 aa13.25□□□□□ -0.29
HMG20A-206ENST00000558845 USP17L21D6R901 530 aa13.25□□□□□ -0.29
HMG20A-206ENST00000558845 ORC4O43929 436 aa13.25□□□□□ -0.29
HMG20A-206ENST00000558845 CD2BP2O95400 341 aaKnown RBP13.25□□□□□ -0.29
HMG20A-206ENST00000558845 USP17L8P0C7I0 530 aa13.25□□□□□ -0.29
HMG20A-206ENST00000558845 HAND2P61296 217 aa13.25□□□□□ -0.29
HMG20A-206ENST00000558845 TRDNQ13061 729 aa13.25□□□□□ -0.29
HMG20A-206ENST00000558845 FKBP1CQ5VVH2 108 aa13.25□□□□□ -0.29
HMG20A-206ENST00000558845 AMOTL1Q8IY63 956 aa13.25□□□□□ -0.29
HMG20A-206ENST00000558845 TGFBRAP1Q8WUH2 860 aa13.25□□□□□ -0.29
HMG20A-206ENST00000558845 PDRG1Q9NUG6 133 aa13.25□□□□□ -0.29
HMG20A-206ENST00000558845 ECM29Q5VYK3 1845 aa13.25□□□□□ -0.29
HMG20A-206ENST00000558845 SLC3A2P08195 630 aaKnown RBP13.24□□□□□ -0.29
HMG20A-206ENST00000558845 MCM5P33992 734 aa13.24□□□□□ -0.29
HMG20A-206ENST00000558845 CFAP100Q494V2 611 aa13.24□□□□□ -0.29
HMG20A-206ENST00000558845 MFSD6Q6ZSS7 791 aa13.24□□□□□ -0.29
HMG20A-206ENST00000558845 RALYLQ86SE5 291 aaKnown RBP13.24□□□□□ -0.29
HMG20A-206ENST00000558845 USP40Q9NVE5 1235 aa13.24□□□□□ -0.29
HMG20A-206ENST00000558845 MCM9Q9NXL9 1143 aa13.24□□□□□ -0.29
HMG20A-206ENST00000558845 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.24□□□□□ -0.29
HMG20A-206ENST00000558845 ADAMTSL1Q8N6G6 1762 aa13.24□□□□□ -0.29
HMG20A-206ENST00000558845 BAZ2AQ9UIF9 1905 aaKnown RBP13.23□□□□□ -0.29
HMG20A-206ENST00000558845 ATRNL1Q5VV63 1379 aa13.23□□□□□ -0.29
HMG20A-206ENST00000558845 GRIN3BO60391 1043 aa13.23□□□□□ -0.29
HMG20A-206ENST00000558845 ENTPD3O75355 529 aa13.23□□□□□ -0.29
HMG20A-206ENST00000558845 AK2P54819 239 aa13.23□□□□□ -0.29
HMG20A-206ENST00000558845 EVCP57679 992 aa13.23□□□□□ -0.29
HMG20A-206ENST00000558845 GPC2Q8N158 579 aa13.23□□□□□ -0.29
HMG20A-206ENST00000558845 TMEM87BQ96K49 555 aa13.23□□□□□ -0.29
HMG20A-206ENST00000558845 ZSCAN31Q96LW9 406 aaPredicted RBP13.23□□□□□ -0.29
HMG20A-206ENST00000558845 LIMCH1Q9UPQ0 1083 aa13.23□□□□□ -0.29
HMG20A-206ENST00000558845 NEDD4P46934 1319 aa13.22□□□□□ -0.29
HMG20A-206ENST00000558845 MINDY4BA8MYZ0 360 aa13.22□□□□□ -0.29
HMG20A-206ENST00000558845 CUL4AQ13619 759 aa13.22□□□□□ -0.29
HMG20A-206ENST00000558845 TOB2Q14106 344 aaPredicted RBP13.22□□□□□ -0.29
HMG20A-206ENST00000558845 DLGAP5Q15398 846 aa13.22□□□□□ -0.29
HMG20A-206ENST00000558845 TTC6Q86TZ1 520 aa13.22□□□□□ -0.29
HMG20A-206ENST00000558845 MAPKAPK5Q8IW41 473 aa13.22□□□□□ -0.29
HMG20A-206ENST00000558845 OSBPL5Q9H0X9 879 aaPredicted RBP13.22□□□□□ -0.29
HMG20A-206ENST00000558845 EHD4Q9H223 541 aa13.22□□□□□ -0.29
HMG20A-206ENST00000558845 DHX36Q9H2U1 1008 aaKnown RBP13.22□□□□□ -0.29
HMG20A-206ENST00000558845 ZNF287Q9HBT7 754 aa13.22□□□□□ -0.29
HMG20A-206ENST00000558845 SH2B1Q9NRF2 756 aaPredicted RBP13.22□□□□□ -0.29
HMG20A-206ENST00000558845 TACC3Q9Y6A5 838 aa13.22□□□□□ -0.29
HMG20A-206ENST00000558845 ZNF541Q9H0D2 1346 aa13.21□□□□□ -0.29
HMG20A-206ENST00000558845 CPA1P15085 419 aa13.21□□□□□ -0.29
HMG20A-206ENST00000558845 ANTXR2P58335 489 aa13.21□□□□□ -0.29
HMG20A-206ENST00000558845 CTDSPL2Q05D32 466 aa13.21□□□□□ -0.29
HMG20A-206ENST00000558845 GABPAQ06546 454 aa13.21□□□□□ -0.29
HMG20A-206ENST00000558845 PDE4BQ07343 736 aa13.21□□□□□ -0.29
HMG20A-206ENST00000558845 COL9A3Q14050 684 aaPredicted RBP13.21□□□□□ -0.29
HMG20A-206ENST00000558845 C16orf86Q6ZW13 317 aa13.21□□□□□ -0.29
HMG20A-206ENST00000558845 IFNL1Q8IU54 200 aa13.21□□□□□ -0.29
HMG20A-206ENST00000558845 ESR2Q92731 530 aa13.21□□□□□ -0.29
HMG20A-206ENST00000558845 INTS4Q96HW7 963 aaKnown RBP13.21□□□□□ -0.29
HMG20A-206ENST00000558845 TMX3Q96JJ7 454 aa13.21□□□□□ -0.29
HMG20A-206ENST00000558845 PRMT6Q96LA8 375 aaPredicted RBP13.21□□□□□ -0.29
HMG20A-206ENST00000558845 DDX4Q9NQI0 724 aaKnown RBP13.21□□□□□ -0.29
HMG20A-206ENST00000558845 MYH1P12882 1939 aa13.21□□□□□ -0.3
HMG20A-206ENST00000558845 B4E1Z4 1266 aa13.2□□□□□ -0.3
HMG20A-206ENST00000558845 POLR3DP05423 398 aaPredicted RBP13.2□□□□□ -0.3
HMG20A-206ENST00000558845 LIFRP42702 1097 aa13.2□□□□□ -0.3
HMG20A-206ENST00000558845 GMPSP49915 693 aaPredicted RBP13.2□□□□□ -0.3
HMG20A-206ENST00000558845 RBM5P52756 815 aaKnown RBP eCLIP13.2□□□□□ -0.3
HMG20A-206ENST00000558845 FAM83AQ86UY5 434 aa13.2□□□□□ -0.3
HMG20A-206ENST00000558845 METTL16Q86W50 562 aaKnown RBP13.2□□□□□ -0.3
HMG20A-206ENST00000558845 MYOZ2Q9NPC6 264 aa13.2□□□□□ -0.3
HMG20A-206ENST00000558845 TMOD2Q9NZR1 351 aa13.2□□□□□ -0.3
HMG20A-206ENST00000558845 ZSWIM5Q9P217 1185 aa13.2□□□□□ -0.3
HMG20A-206ENST00000558845 FAM198AQ9UFP1 575 aa13.2□□□□□ -0.3
HMG20A-206ENST00000558845 CYP2D7A0A087X1C5 515 aa13.19□□□□□ -0.3
HMG20A-206ENST00000558845 WNT10BO00744 389 aa13.19□□□□□ -0.3
HMG20A-206ENST00000558845 PRC1O43663 620 aa13.19□□□□□ -0.3
HMG20A-206ENST00000558845 MYO1BO43795 1136 aa13.19□□□□□ -0.3
HMG20A-206ENST00000558845 CYP2D6P10635 497 aa13.19□□□□□ -0.3
HMG20A-206ENST00000558845 PLCD1P51178 756 aa13.19□□□□□ -0.3
HMG20A-206ENST00000558845 RCAN1P53805 252 aa13.19□□□□□ -0.3
HMG20A-206ENST00000558845 NFIAQ12857 509 aa13.19□□□□□ -0.3
HMG20A-206ENST00000558845 Q6ZUG5 572 aa13.19□□□□□ -0.3
HMG20A-206ENST00000558845 SGMS1Q86VZ5 419 aa13.19□□□□□ -0.3
HMG20A-206ENST00000558845 TMTC2Q8N394 836 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms