RNA–Protein interactions for RNA: ENST00000553747.5

LINC00648-201, long intergenic non-protein coding RNA 648, humanhuman

TSL 5

Gene LINC00648, Length 280 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-201ENST00000553747 AP3B2Q13367 1082 aa5.88□□□□□ -1.47
LINC00648-201ENST00000553747 IKZF1Q13422 519 aa5.88□□□□□ -1.47
LINC00648-201ENST00000553747 ALG1LQ6GMV1 187 aa5.88□□□□□ -1.47
LINC00648-201ENST00000553747 NXPE4Q6UWF7 544 aa5.88□□□□□ -1.47
LINC00648-201ENST00000553747 ANKLE2Q86XL3 938 aa5.88□□□□□ -1.47
LINC00648-201ENST00000553747 TOP6BLQ8N6T0 577 aa5.88□□□□□ -1.47
LINC00648-201ENST00000553747 FBF1Q8TES7 1133 aa5.88□□□□□ -1.47
LINC00648-201ENST00000553747 CTNND2Q9UQB3 1225 aa5.88□□□□□ -1.47
LINC00648-201ENST00000553747 HNRNPUQ00839 825 aaKnown RBP eCLIP5.87□□□□□ -1.47
LINC00648-201ENST00000553747 ID3Q02535 119 aa5.87□□□□□ -1.47
LINC00648-201ENST00000553747 FMR1Q06787 632 aaKnown RBP eCLIP5.87□□□□□ -1.47
LINC00648-201ENST00000553747 ATXN3LQ9H3M9 355 aa5.87□□□□□ -1.47
LINC00648-201ENST00000553747 KCNK12Q9HB15 430 aa5.87□□□□□ -1.47
LINC00648-201ENST00000553747 GPN3Q9UHW5 284 aaPredicted RBP5.87□□□□□ -1.47
LINC00648-201ENST00000553747 AKAP2Q9Y2D5 859 aa5.87□□□□□ -1.47
LINC00648-201ENST00000553747 KRT1P04264 644 aa5.86□□□□□ -1.47
LINC00648-201ENST00000553747 FAAP100Q0VG06 881 aa5.86□□□□□ -1.47
LINC00648-201ENST00000553747 MPZL3Q6UWV2 235 aa5.86□□□□□ -1.47
LINC00648-201ENST00000553747 TTLL10Q6ZVT0 673 aa5.86□□□□□ -1.47
LINC00648-201ENST00000553747 HEXIM2Q96MH2 286 aaKnown RBP5.86□□□□□ -1.47
LINC00648-201ENST00000553747 PPP1R16BQ96T49 567 aa5.86□□□□□ -1.47
LINC00648-201ENST00000553747 MKNK2Q9HBH9 465 aa5.86□□□□□ -1.47
LINC00648-201ENST00000553747 TMEM39AQ9NV64 488 aa5.86□□□□□ -1.47
LINC00648-201ENST00000553747 NEFMP07197 916 aa5.85□□□□□ -1.47
LINC00648-201ENST00000553747 SLFN14P0C7P3 912 aa5.85□□□□□ -1.47
LINC00648-201ENST00000553747 SND1Q7KZF4 910 aaKnown RBP eCLIP5.85□□□□□ -1.47
LINC00648-201ENST00000553747 SIAH1Q8IUQ4 282 aa5.85□□□□□ -1.47
LINC00648-201ENST00000553747 SRCIN1Q9C0H9 1055 aa5.85□□□□□ -1.47
LINC00648-201ENST00000553747 TNKS2Q9H2K2 1166 aa5.85□□□□□ -1.47
LINC00648-201ENST00000553747 PCOLCE2Q9UKZ9 415 aa5.85□□□□□ -1.47
LINC00648-201ENST00000553747 SPG7Q9UQ90 795 aa5.85□□□□□ -1.47
LINC00648-201ENST00000553747 SYNGAP1Q96PV0 1343 aa5.84□□□□□ -1.47
LINC00648-201ENST00000553747 GIPC1O14908 333 aa5.84□□□□□ -1.47
LINC00648-201ENST00000553747 GSTT1P30711 240 aa5.84□□□□□ -1.47
LINC00648-201ENST00000553747 DIRC2Q96SL1 478 aa5.84□□□□□ -1.47
LINC00648-201ENST00000553747 SETDB2Q96T68 719 aa5.84□□□□□ -1.47
LINC00648-201ENST00000553747 SSU72Q9NP77 194 aaKnown RBP5.84□□□□□ -1.47
LINC00648-201ENST00000553747 WWC3Q9ULE0 1092 aa5.84□□□□□ -1.47
LINC00648-201ENST00000553747 PCDHGC5Q9Y5F6 944 aa5.84□□□□□ -1.47
LINC00648-201ENST00000553747 NPIPB6E9PJ23 425 aa5.83□□□□□ -1.48
LINC00648-201ENST00000553747 LDHBP07195 334 aaKnown RBP5.83□□□□□ -1.48
LINC00648-201ENST00000553747 P4HBP07237 508 aaKnown RBP5.83□□□□□ -1.48
LINC00648-201ENST00000553747 GLI1P08151 1106 aa5.83□□□□□ -1.48
LINC00648-201ENST00000553747 GSTP1P09211 210 aaKnown RBP5.83□□□□□ -1.48
LINC00648-201ENST00000553747 INHBBP09529 407 aa5.83□□□□□ -1.48
LINC00648-201ENST00000553747 AFMP43652 599 aa5.83□□□□□ -1.48
LINC00648-201ENST00000553747 ASB11Q8WXH4 323 aa5.83□□□□□ -1.48
LINC00648-201ENST00000553747 ISL2Q96A47 359 aa5.83□□□□□ -1.48
LINC00648-201ENST00000553747 NFIBO00712 420 aa5.82□□□□□ -1.48
LINC00648-201ENST00000553747 FGD1P98174 961 aa5.82□□□□□ -1.48
LINC00648-201ENST00000553747 KIF4BQ2VIQ3 1234 aa5.82□□□□□ -1.48
LINC00648-201ENST00000553747 FAM214BQ7L5A3 538 aa5.82□□□□□ -1.48
LINC00648-201ENST00000553747 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.82□□□□□ -1.48
LINC00648-201ENST00000553747 SULF2Q8IWU5 870 aa5.82□□□□□ -1.48
LINC00648-201ENST00000553747 SPACA3Q8IXA5 215 aa5.82□□□□□ -1.48
LINC00648-201ENST00000553747 KCNB2Q92953 911 aa5.82□□□□□ -1.48
LINC00648-201ENST00000553747 KIRREL1Q96J84 757 aa5.82□□□□□ -1.48
LINC00648-201ENST00000553747 OSBPL7Q9BZF2 842 aa5.82□□□□□ -1.48
LINC00648-201ENST00000553747 CEP44Q9C0F1 390 aa5.82□□□□□ -1.48
LINC00648-201ENST00000553747 NSUN3Q9H649 340 aaKnown RBP5.82□□□□□ -1.48
LINC00648-201ENST00000553747 SNX11Q9Y5W9 270 aa5.82□□□□□ -1.48
LINC00648-201ENST00000553747 ANKRD33BA6NCL7 494 aa5.81□□□□□ -1.48
LINC00648-201ENST00000553747 ARNTP27540 789 aa5.81□□□□□ -1.48
LINC00648-201ENST00000553747 TMEM67Q5HYA8 995 aa5.81□□□□□ -1.48
LINC00648-201ENST00000553747 C3orf58Q8NDZ4 430 aa5.81□□□□□ -1.48
LINC00648-201ENST00000553747 FRMD6Q96NE9 622 aa5.81□□□□□ -1.48
LINC00648-201ENST00000553747 EMILIN2Q9BXX0 1053 aa5.81□□□□□ -1.48
LINC00648-201ENST00000553747 KRT82Q9NSB4 513 aa5.81□□□□□ -1.48
LINC00648-201ENST00000553747 PPM1HQ9ULR3 514 aa5.81□□□□□ -1.48
LINC00648-201ENST00000553747 SAMM50Q9Y512 469 aa5.81□□□□□ -1.48
LINC00648-201ENST00000553747 NME2P22392 152 aa5.8□□□□□ -1.48
LINC00648-201ENST00000553747 TRIM26Q12899 539 aaPredicted RBP5.8□□□□□ -1.48
LINC00648-201ENST00000553747 NKPD1Q17RQ9 610 aa5.8□□□□□ -1.48
LINC00648-201ENST00000553747 EAPPQ56P03 285 aaPredicted RBP5.8□□□□□ -1.48
LINC00648-201ENST00000553747 TPTE2Q6XPS3 522 aa5.8□□□□□ -1.48
LINC00648-201ENST00000553747 CYFIP1Q7L576 1253 aa5.8□□□□□ -1.48
LINC00648-201ENST00000553747 C12orf49Q9H741 205 aa5.8□□□□□ -1.48
LINC00648-201ENST00000553747 CARS2Q9HA77 564 aaKnown RBP5.8□□□□□ -1.48
LINC00648-201ENST00000553747 CBX8Q9HC52 389 aa5.8□□□□□ -1.48
LINC00648-201ENST00000553747 FAM8A1Q9UBU6 413 aa5.8□□□□□ -1.48
LINC00648-201ENST00000553747 ZBTB7CA1YPR0 619 aa5.79□□□□□ -1.48
LINC00648-201ENST00000553747 PRPF40AO75400 957 aaKnown RBP5.79□□□□□ -1.48
LINC00648-201ENST00000553747 GNA15P30679 374 aa5.79□□□□□ -1.48
LINC00648-201ENST00000553747 CTSWP56202 376 aa5.79□□□□□ -1.48
LINC00648-201ENST00000553747 MAP1SQ66K74 1059 aaPredicted RBP5.79□□□□□ -1.48
LINC00648-201ENST00000553747 UBE3DQ7Z6J8 389 aa5.79□□□□□ -1.48
LINC00648-201ENST00000553747 PDZD3Q86UT5 571 aa5.79□□□□□ -1.48
LINC00648-201ENST00000553747 FBXO15Q8NCQ5 510 aaPredicted RBP5.79□□□□□ -1.48
LINC00648-201ENST00000553747 NECAB3Q96P71 396 aaPredicted RBP5.79□□□□□ -1.48
LINC00648-201ENST00000553747 C19orf73Q9NVV2 129 aa5.79□□□□□ -1.48
LINC00648-201ENST00000553747 PITPNM2Q9BZ72 1349 aa5.78□□□□□ -1.48
LINC00648-201ENST00000553747 RBAK-RBAKDNI3L0D1 243 aa5.78□□□□□ -1.48
LINC00648-201ENST00000553747 FBXO24O75426 580 aa5.78□□□□□ -1.48
LINC00648-201ENST00000553747 USP17L7P0C7H9 530 aa5.78□□□□□ -1.48
LINC00648-201ENST00000553747 EIF4BP23588 611 aaKnown RBP5.78□□□□□ -1.48
LINC00648-201ENST00000553747 ATG14Q6ZNE5 492 aa5.78□□□□□ -1.48
LINC00648-201ENST00000553747 STK35Q8TDR2 534 aa5.78□□□□□ -1.48
LINC00648-201ENST00000553747 ACSBG1Q96GR2 724 aa5.78□□□□□ -1.48
LINC00648-201ENST00000553747 CSADQ9Y600 493 aa5.78□□□□□ -1.48
LINC00648-201ENST00000553747 ENC1O14682 589 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms