RNA–Protein interactions for RNA: ENST00000549580.1

SNRPF-202, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-202ENST00000549580 FBXO15Q8NCQ5 510 aaPredicted RBP6.84□□□□□ -1.31
SNRPF-202ENST00000549580 ZFYVE1Q9HBF4 777 aa6.84□□□□□ -1.31
SNRPF-202ENST00000549580 AFMP43652 599 aa6.83□□□□□ -1.32
SNRPF-202ENST00000549580 USP5P45974 858 aa6.83□□□□□ -1.32
SNRPF-202ENST00000549580 TAGLNQ01995 201 aaKnown RBP6.83□□□□□ -1.32
SNRPF-202ENST00000549580 KCNA10Q16322 511 aa6.83□□□□□ -1.32
SNRPF-202ENST00000549580 TMC7Q7Z402 723 aa6.83□□□□□ -1.32
SNRPF-202ENST00000549580 NDUFB5O43674 189 aa6.82□□□□□ -1.32
SNRPF-202ENST00000549580 ID3Q02535 119 aa6.82□□□□□ -1.32
SNRPF-202ENST00000549580 MPZL3Q6UWV2 235 aa6.82□□□□□ -1.32
SNRPF-202ENST00000549580 TOP6BLQ8N6T0 577 aa6.82□□□□□ -1.32
SNRPF-202ENST00000549580 DDX54Q8TDD1 881 aaKnown RBP6.82□□□□□ -1.32
SNRPF-202ENST00000549580 RELTQ969Z4 430 aa6.82□□□□□ -1.32
SNRPF-202ENST00000549580 HEXIM2Q96MH2 286 aaKnown RBP6.82□□□□□ -1.32
SNRPF-202ENST00000549580 BRPF3Q9ULD4 1205 aa6.82□□□□□ -1.32
SNRPF-202ENST00000549580 PCDHGC5Q9Y5F6 944 aa6.82□□□□□ -1.32
SNRPF-202ENST00000549580 SNX11Q9Y5W9 270 aa6.82□□□□□ -1.32
SNRPF-202ENST00000549580 TREHO43280 583 aa6.81□□□□□ -1.32
SNRPF-202ENST00000549580 IGHA2P01877 340 aa6.81□□□□□ -1.32
SNRPF-202ENST00000549580 NEFMP07197 916 aa6.81□□□□□ -1.32
SNRPF-202ENST00000549580 MED14OSP0DP75 135 aa6.81□□□□□ -1.32
SNRPF-202ENST00000549580 ITPKAP23677 461 aa6.81□□□□□ -1.32
SNRPF-202ENST00000549580 KRTAP10-2P60368 255 aa6.81□□□□□ -1.32
SNRPF-202ENST00000549580 ZP2Q05996 745 aa6.81□□□□□ -1.32
SNRPF-202ENST00000549580 FMR1Q06787 632 aaKnown RBP eCLIP6.81□□□□□ -1.32
SNRPF-202ENST00000549580 FAAP100Q0VG06 881 aa6.81□□□□□ -1.32
SNRPF-202ENST00000549580 DSC3Q14574 896 aa6.81□□□□□ -1.32
SNRPF-202ENST00000549580 EAPPQ56P03 285 aaPredicted RBP6.81□□□□□ -1.32
SNRPF-202ENST00000549580 KIAA0319Q5VV43 1072 aa6.81□□□□□ -1.32
SNRPF-202ENST00000549580 EHD4Q9H223 541 aa6.81□□□□□ -1.32
SNRPF-202ENST00000549580 ATXN3LQ9H3M9 355 aa6.81□□□□□ -1.32
SNRPF-202ENST00000549580 P4HBP07237 508 aaKnown RBP6.8□□□□□ -1.32
SNRPF-202ENST00000549580 CIAPIN1Q6FI81 312 aa6.8□□□□□ -1.32
SNRPF-202ENST00000549580 KIRREL1Q96J84 757 aa6.8□□□□□ -1.32
SNRPF-202ENST00000549580 KCNK12Q9HB15 430 aa6.8□□□□□ -1.32
SNRPF-202ENST00000549580 NPHS2Q9NP85 383 aa6.8□□□□□ -1.32
SNRPF-202ENST00000549580 AP3B2Q13367 1082 aa6.79□□□□□ -1.32
SNRPF-202ENST00000549580 IKZF1Q13422 519 aa6.79□□□□□ -1.32
SNRPF-202ENST00000549580 DBX2Q6ZNG2 339 aa6.79□□□□□ -1.32
SNRPF-202ENST00000549580 ASB11Q8WXH4 323 aa6.79□□□□□ -1.32
SNRPF-202ENST00000549580 ISL2Q96A47 359 aa6.79□□□□□ -1.32
SNRPF-202ENST00000549580 DMRTB1Q96MA1 342 aa6.79□□□□□ -1.32
SNRPF-202ENST00000549580 FAM129BQ96TA1 746 aa6.79□□□□□ -1.32
SNRPF-202ENST00000549580 RBAK-RBAKDNI3L0D1 243 aa6.78□□□□□ -1.32
SNRPF-202ENST00000549580 SLFN14P0C7P3 912 aa6.78□□□□□ -1.32
SNRPF-202ENST00000549580 TCF3P15923 654 aa6.78□□□□□ -1.32
SNRPF-202ENST00000549580 ORC1Q13415 861 aa6.78□□□□□ -1.32
SNRPF-202ENST00000549580 KIF4BQ2VIQ3 1234 aa6.78□□□□□ -1.32
SNRPF-202ENST00000549580 FAM214BQ7L5A3 538 aa6.78□□□□□ -1.32
SNRPF-202ENST00000549580 NSUN3Q9H649 340 aaKnown RBP6.78□□□□□ -1.32
SNRPF-202ENST00000549580 ABCB6Q9NP58 842 aa6.78□□□□□ -1.32
SNRPF-202ENST00000549580 C19orf73Q9NVV2 129 aa6.78□□□□□ -1.32
SNRPF-202ENST00000549580 PCOLCE2Q9UKZ9 415 aa6.78□□□□□ -1.32
SNRPF-202ENST00000549580 IGSF3O75054 1194 aa6.77□□□□□ -1.33
SNRPF-202ENST00000549580 PLCB3Q01970 1234 aa6.77□□□□□ -1.33
SNRPF-202ENST00000549580 TMEM67Q5HYA8 995 aa6.77□□□□□ -1.33
SNRPF-202ENST00000549580 ATG14Q6ZNE5 492 aa6.77□□□□□ -1.33
SNRPF-202ENST00000549580 ALKBH8Q96BT7 664 aaKnown RBP6.77□□□□□ -1.33
SNRPF-202ENST00000549580 DIRC2Q96SL1 478 aa6.77□□□□□ -1.33
SNRPF-202ENST00000549580 A0A0G2JLL6 359 aaPredicted RBP6.76□□□□□ -1.33
SNRPF-202ENST00000549580 GPR182O15218 404 aa6.76□□□□□ -1.33
SNRPF-202ENST00000549580 FOXD2O60548 495 aaPredicted RBP6.76□□□□□ -1.33
SNRPF-202ENST00000549580 RECKO95980 971 aa6.76□□□□□ -1.33
SNRPF-202ENST00000549580 GSTP1P09211 210 aaKnown RBP6.76□□□□□ -1.33
SNRPF-202ENST00000549580 TMEM253P0C7T8 217 aa6.76□□□□□ -1.33
SNRPF-202ENST00000549580 PDE3BQ13370 1112 aa6.76□□□□□ -1.33
SNRPF-202ENST00000549580 MRPL58Q14197 206 aaKnown RBP6.76□□□□□ -1.33
SNRPF-202ENST00000549580 SPACA3Q8IXA5 215 aa6.76□□□□□ -1.33
SNRPF-202ENST00000549580 STK35Q8TDR2 534 aa6.76□□□□□ -1.33
SNRPF-202ENST00000549580 SSU72Q9NP77 194 aaKnown RBP6.76□□□□□ -1.33
SNRPF-202ENST00000549580 PITPNM2Q9BZ72 1349 aa6.76□□□□□ -1.33
SNRPF-202ENST00000549580 GLDCP23378 1020 aa6.75□□□□□ -1.33
SNRPF-202ENST00000549580 NKPD1Q17RQ9 610 aa6.75□□□□□ -1.33
SNRPF-202ENST00000549580 CYFIP1Q7L576 1253 aa6.75□□□□□ -1.33
SNRPF-202ENST00000549580 UBE3DQ7Z6J8 389 aa6.75□□□□□ -1.33
SNRPF-202ENST00000549580 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.75□□□□□ -1.33
SNRPF-202ENST00000549580 TMC1Q8TDI8 760 aa6.75□□□□□ -1.33
SNRPF-202ENST00000549580 KCNB2Q92953 911 aa6.75□□□□□ -1.33
SNRPF-202ENST00000549580 PARD6AQ9NPB6 346 aa6.75□□□□□ -1.33
SNRPF-202ENST00000549580 TMEM238LA0A1B0GVL6 79 aa6.74□□□□□ -1.33
SNRPF-202ENST00000549580 PRPF40AO75400 957 aaKnown RBP6.74□□□□□ -1.33
SNRPF-202ENST00000549580 FGD1P98174 961 aa6.74□□□□□ -1.33
SNRPF-202ENST00000549580 SMG5Q9UPR3 1016 aaKnown RBP6.74□□□□□ -1.33
SNRPF-202ENST00000549580 TCAF2A6NFQ2 919 aa6.73□□□□□ -1.33
SNRPF-202ENST00000549580 LINC00310P59036 64 aa6.73□□□□□ -1.33
SNRPF-202ENST00000549580 PDZD3Q86UT5 571 aa6.73□□□□□ -1.33
SNRPF-202ENST00000549580 BCL11AQ9H165 835 aa6.73□□□□□ -1.33
SNRPF-202ENST00000549580 ETV2O00321 342 aaPredicted RBP6.72□□□□□ -1.33
SNRPF-202ENST00000549580 NUAK1O60285 661 aa6.72□□□□□ -1.33
SNRPF-202ENST00000549580 LDHBP07195 334 aaKnown RBP6.72□□□□□ -1.33
SNRPF-202ENST00000549580 PTPN12Q05209 780 aaKnown RBP6.72□□□□□ -1.33
SNRPF-202ENST00000549580 ENOX2Q16206 610 aaKnown RBP6.72□□□□□ -1.33
SNRPF-202ENST00000549580 LDLRAD1Q5T700 205 aa6.72□□□□□ -1.33
SNRPF-202ENST00000549580 MPRIPQ6WCQ1 1025 aa6.72□□□□□ -1.33
SNRPF-202ENST00000549580 CSADQ9Y600 493 aa6.72□□□□□ -1.33
SNRPF-202ENST00000549580 GADD45BO75293 160 aaPredicted RBP6.71□□□□□ -1.34
SNRPF-202ENST00000549580 GDNFP39905 211 aa6.71□□□□□ -1.34
SNRPF-202ENST00000549580 MAPK8P45983 427 aa6.71□□□□□ -1.34
SNRPF-202ENST00000549580 ZC3H12AQ5D1E8 599 aaKnown RBP6.71□□□□□ -1.34
SNRPF-202ENST00000549580 GGNQ86UU5 652 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms