RNA–Protein interactions for RNA: ENST00000548092.5

TRAFD1-204, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-204ENST00000548092 KIF3BO15066 747 aa6.44□□□□□ -1.38
TRAFD1-204ENST00000548092 TGFB1P01137 390 aa6.44□□□□□ -1.38
TRAFD1-204ENST00000548092 ATF3P18847 181 aa6.44□□□□□ -1.38
TRAFD1-204ENST00000548092 GSTM4Q03013 218 aa6.44□□□□□ -1.38
TRAFD1-204ENST00000548092 NFIAQ12857 509 aa6.44□□□□□ -1.38
TRAFD1-204ENST00000548092 ZDHHC13Q8IUH4 622 aa6.44□□□□□ -1.38
TRAFD1-204ENST00000548092 FAM129BQ96TA1 746 aa6.44□□□□□ -1.38
TRAFD1-204ENST00000548092 FAM83CQ9BQN1 747 aa6.44□□□□□ -1.38
TRAFD1-204ENST00000548092 USP26Q9BXU7 913 aa6.44□□□□□ -1.38
TRAFD1-204ENST00000548092 TMPRSS13Q9BYE2 586 aa6.44□□□□□ -1.38
TRAFD1-204ENST00000548092 PLEKHH2Q8IVE3 1493 aa6.44□□□□□ -1.38
TRAFD1-204ENST00000548092 RGPD1P0DJD0 1748 aa6.44□□□□□ -1.38
TRAFD1-204ENST00000548092 PIK3C2BO00750 1634 aa6.43□□□□□ -1.38
TRAFD1-204ENST00000548092 MST1RQ04912 1400 aa6.43□□□□□ -1.38
TRAFD1-204ENST00000548092 MYOM2P54296 1465 aa6.43□□□□□ -1.38
TRAFD1-204ENST00000548092 SHANK3Q9BYB0 1731 aa6.43□□□□□ -1.38
TRAFD1-204ENST00000548092 PRR19A6NJB7 356 aa6.43□□□□□ -1.38
TRAFD1-204ENST00000548092 SART1O43290 800 aaKnown RBP6.43□□□□□ -1.38
TRAFD1-204ENST00000548092 CTSBP07858 339 aa6.43□□□□□ -1.38
TRAFD1-204ENST00000548092 DRD2P14416 443 aa6.43□□□□□ -1.38
TRAFD1-204ENST00000548092 HSPA6P17066 643 aa6.43□□□□□ -1.38
TRAFD1-204ENST00000548092 RNF43Q68DV7 783 aa6.43□□□□□ -1.38
TRAFD1-204ENST00000548092 ANKRD34AQ69YU3 496 aa6.43□□□□□ -1.38
TRAFD1-204ENST00000548092 B4GALNT3Q6L9W6 998 aa6.43□□□□□ -1.38
TRAFD1-204ENST00000548092 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.43□□□□□ -1.38
TRAFD1-204ENST00000548092 BEND4Q6ZU67 534 aa6.43□□□□□ -1.38
TRAFD1-204ENST00000548092 CLEC10AQ8IUN9 316 aa6.43□□□□□ -1.38
TRAFD1-204ENST00000548092 PSMG3-AS1Q96PY0 264 aa6.43□□□□□ -1.38
TRAFD1-204ENST00000548092 NRSN2Q9GZP1 204 aa6.43□□□□□ -1.38
TRAFD1-204ENST00000548092 KCNF1Q9H3M0 494 aa6.43□□□□□ -1.38
TRAFD1-204ENST00000548092 SOX17Q9H6I2 414 aaPredicted RBP6.43□□□□□ -1.38
TRAFD1-204ENST00000548092 C19orf44Q9H6X5 657 aa6.43□□□□□ -1.38
TRAFD1-204ENST00000548092 LIN7BQ9HAP6 207 aa6.43□□□□□ -1.38
TRAFD1-204ENST00000548092 COL22A1Q8NFW1 1626 aaPredicted RBP6.43□□□□□ -1.38
TRAFD1-204ENST00000548092 TNS1Q9HBL0 1735 aaKnown RBP6.42□□□□□ -1.38
TRAFD1-204ENST00000548092 CD97P48960 835 aa6.42□□□□□ -1.38
TRAFD1-204ENST00000548092 SGO2Q562F6 1265 aa6.42□□□□□ -1.38
TRAFD1-204ENST00000548092 EXOSC6Q5RKV6 272 aaKnown RBP6.42□□□□□ -1.38
TRAFD1-204ENST00000548092 NUTM2GQ5VZR2 741 aa6.42□□□□□ -1.38
TRAFD1-204ENST00000548092 FDX2Q6P4F2 183 aa6.42□□□□□ -1.38
TRAFD1-204ENST00000548092 SHISA5Q8N114 240 aa6.42□□□□□ -1.38
TRAFD1-204ENST00000548092 C12orf50Q8NA57 414 aaPredicted RBP6.42□□□□□ -1.38
TRAFD1-204ENST00000548092 SMG8Q8ND04 991 aaKnown RBP6.42□□□□□ -1.38
TRAFD1-204ENST00000548092 DDX17Q92841 729 aaKnown RBP6.42□□□□□ -1.38
TRAFD1-204ENST00000548092 PCGF6Q9BYE7 350 aa6.42□□□□□ -1.38
TRAFD1-204ENST00000548092 NIF3L1Q9GZT8 377 aa6.42□□□□□ -1.38
TRAFD1-204ENST00000548092 SPON1Q9HCB6 807 aa6.42□□□□□ -1.38
TRAFD1-204ENST00000548092 PCMTD2Q9NV79 361 aa6.42□□□□□ -1.38
TRAFD1-204ENST00000548092 TIMELESSQ9UNS1 1208 aa6.42□□□□□ -1.38
TRAFD1-204ENST00000548092 EFCAB6Q5THR3 1501 aa6.41□□□□□ -1.38
TRAFD1-204ENST00000548092 NRKQ7Z2Y5 1582 aa6.41□□□□□ -1.38
TRAFD1-204ENST00000548092 LAMC1P11047 1609 aa6.41□□□□□ -1.38
TRAFD1-204ENST00000548092 GPR182O15218 404 aa6.41□□□□□ -1.38
TRAFD1-204ENST00000548092 KCNQ2O43526 872 aa6.41□□□□□ -1.38
TRAFD1-204ENST00000548092 TIAF1O95411 115 aa6.41□□□□□ -1.38
TRAFD1-204ENST00000548092 ECEL1O95672 775 aa6.41□□□□□ -1.38
TRAFD1-204ENST00000548092 RANGAP1P46060 587 aaPredicted RBP6.41□□□□□ -1.38
TRAFD1-204ENST00000548092 PCDH1Q08174 1060 aa6.41□□□□□ -1.38
TRAFD1-204ENST00000548092 KIAA0319Q5VV43 1072 aa6.41□□□□□ -1.38
TRAFD1-204ENST00000548092 KRT27Q7Z3Y8 459 aa6.41□□□□□ -1.38
TRAFD1-204ENST00000548092 NPHS2Q9NP85 383 aa6.41□□□□□ -1.38
TRAFD1-204ENST00000548092 LRRIQ1Q96JM4 1722 aa6.41□□□□□ -1.38
TRAFD1-204ENST00000548092 RREB1Q92766 1687 aa6.4□□□□□ -1.38
TRAFD1-204ENST00000548092 GSC2O15499 205 aa6.4□□□□□ -1.38
TRAFD1-204ENST00000548092 NDUFB5O43674 189 aa6.4□□□□□ -1.38
TRAFD1-204ENST00000548092 ADAMTS4O75173 837 aa6.4□□□□□ -1.38
TRAFD1-204ENST00000548092 MAP4P27816 1152 aaKnown RBP6.4□□□□□ -1.38
TRAFD1-204ENST00000548092 EZH2Q15910 746 aaKnown RBP6.4□□□□□ -1.38
TRAFD1-204ENST00000548092 CDPF1Q6NVV7 123 aa6.4□□□□□ -1.38
TRAFD1-204ENST00000548092 SHKBP1Q8TBC3 707 aa6.4□□□□□ -1.38
TRAFD1-204ENST00000548092 DBNDD2Q9BQY9 259 aa6.4□□□□□ -1.38
TRAFD1-204ENST00000548092 CLEC4MQ9H2X3 399 aaPredicted RBP6.4□□□□□ -1.38
TRAFD1-204ENST00000548092 SUGCTQ9HAC7 445 aa6.4□□□□□ -1.38
TRAFD1-204ENST00000548092 ADGRB3O60242 1522 aa6.4□□□□□ -1.39
TRAFD1-204ENST00000548092 SLIT2O94813 1529 aa6.4□□□□□ -1.39
TRAFD1-204ENST00000548092 ADGRB2O60241 1585 aa6.4□□□□□ -1.39
TRAFD1-204ENST00000548092 MARF1Q9Y4F3 1742 aaKnown RBP6.39□□□□□ -1.39
TRAFD1-204ENST00000548092 CPNE3O75131 537 aaKnown RBP6.39□□□□□ -1.39
TRAFD1-204ENST00000548092 CCDC74AQ96AQ1 378 aa6.39□□□□□ -1.39
TRAFD1-204ENST00000548092 MFSD14AQ96MC6 490 aa6.39□□□□□ -1.39
TRAFD1-204ENST00000548092 TRIM56Q9BRZ2 755 aaKnown RBP6.39□□□□□ -1.39
TRAFD1-204ENST00000548092 EHD4Q9H223 541 aa6.39□□□□□ -1.39
TRAFD1-204ENST00000548092 CYP4F12Q9HCS2 524 aa6.39□□□□□ -1.39
TRAFD1-204ENST00000548092 FMN1Q68DA7 1419 aa6.39□□□□□ -1.39
TRAFD1-204ENST00000548092 MYOM1P52179 1685 aa6.39□□□□□ -1.39
TRAFD1-204ENST00000548092 NUP188Q5SRE5 1749 aa6.39□□□□□ -1.39
TRAFD1-204ENST00000548092 EIF1AYO14602 144 aaKnown RBP6.38□□□□□ -1.39
TRAFD1-204ENST00000548092 COBLO75128 1261 aa6.38□□□□□ -1.39
TRAFD1-204ENST00000548092 MAOBP27338 520 aa6.38□□□□□ -1.39
TRAFD1-204ENST00000548092 PDE3BQ13370 1112 aa6.38□□□□□ -1.39
TRAFD1-204ENST00000548092 UNC5CLQ8IV45 518 aa6.38□□□□□ -1.39
TRAFD1-204ENST00000548092 C2CD4AQ8NCU7 369 aaPredicted RBP6.38□□□□□ -1.39
TRAFD1-204ENST00000548092 FBLIM1Q8WUP2 373 aa6.38□□□□□ -1.39
TRAFD1-204ENST00000548092 CITED4Q96RK1 184 aa6.38□□□□□ -1.39
TRAFD1-204ENST00000548092 CAMKK2Q96RR4 588 aa6.38□□□□□ -1.39
TRAFD1-204ENST00000548092 ZNF576Q9H609 170 aa6.38□□□□□ -1.39
TRAFD1-204ENST00000548092 HIF3AQ9Y2N7 669 aa6.38□□□□□ -1.39
TRAFD1-204ENST00000548092 PARD3Q8TEW0 1356 aa6.38□□□□□ -1.39
TRAFD1-204ENST00000548092 MBD5Q9P267 1494 aa6.38□□□□□ -1.39
TRAFD1-204ENST00000548092 CFAP65Q6ZU64 1925 aaKnown RBP6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms