RNA–Protein interactions for RNA: ENST00000543511.1

DDX11-225, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 571 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-225ENST00000543511 KHSRPQ92945 711 aaKnown RBP eCLIP12.78□□□□□ -0.36
DDX11-225ENST00000543511 TDRD3Q9H7E2 651 aaKnown RBP12.78□□□□□ -0.36
DDX11-225ENST00000543511 ZNF70Q9UC06 446 aaPredicted RBP12.78□□□□□ -0.36
DDX11-225ENST00000543511 NAV1Q8NEY1 1877 aa12.78□□□□□ -0.36
DDX11-225ENST00000543511 SIPA1L1O43166 1804 aa12.77□□□□□ -0.37
DDX11-225ENST00000543511 CLRN2A0PK11 232 aa12.77□□□□□ -0.37
DDX11-225ENST00000543511 LDHCP07864 332 aa12.77□□□□□ -0.37
DDX11-225ENST00000543511 GSPT1P15170 499 aaKnown RBP12.77□□□□□ -0.37
DDX11-225ENST00000543511 CYP7A1P22680 504 aa12.77□□□□□ -0.37
DDX11-225ENST00000543511 SLFNL1Q499Z3 407 aa12.77□□□□□ -0.37
DDX11-225ENST00000543511 ARSIQ5FYB1 569 aa12.77□□□□□ -0.37
DDX11-225ENST00000543511 TTC22Q5TAA0 569 aa12.77□□□□□ -0.37
DDX11-225ENST00000543511 MAP1SQ66K74 1059 aaPredicted RBP12.77□□□□□ -0.37
DDX11-225ENST00000543511 CDC42EP5Q6NZY7 148 aa12.77□□□□□ -0.37
DDX11-225ENST00000543511 SLF2Q8IX21 1173 aa12.77□□□□□ -0.37
DDX11-225ENST00000543511 PXYLP1Q8TE99 480 aa12.77□□□□□ -0.37
DDX11-225ENST00000543511 ADGRG1Q9Y653 693 aa12.77□□□□□ -0.37
DDX11-225ENST00000543511 MYH1P12882 1939 aa12.77□□□□□ -0.37
DDX11-225ENST00000543511 HOXB3P14651 431 aaPredicted RBP12.76□□□□□ -0.37
DDX11-225ENST00000543511 RHBDL3P58872 404 aa12.76□□□□□ -0.37
DDX11-225ENST00000543511 UBE3CQ15386 1083 aa12.76□□□□□ -0.37
DDX11-225ENST00000543511 SLC9C2Q5TAH2 1124 aa12.76□□□□□ -0.37
DDX11-225ENST00000543511 TTC13Q8NBP0 860 aa12.76□□□□□ -0.37
DDX11-225ENST00000543511 SMC1BQ8NDV3 1235 aa12.76□□□□□ -0.37
DDX11-225ENST00000543511 NLRP7Q8WX94 980 aa12.76□□□□□ -0.37
DDX11-225ENST00000543511 EVI5LQ96CN4 794 aa12.76□□□□□ -0.37
DDX11-225ENST00000543511 ADAM33Q9BZ11 813 aa12.76□□□□□ -0.37
DDX11-225ENST00000543511 GLIS2Q9BZE0 524 aaPredicted RBP12.76□□□□□ -0.37
DDX11-225ENST00000543511 FAM217BQ9NTX9 383 aaPredicted RBP12.76□□□□□ -0.37
DDX11-225ENST00000543511 SCAF8Q9UPN6 1271 aaKnown RBP12.76□□□□□ -0.37
DDX11-225ENST00000543511 ZNF532Q9HCE3 1301 aa12.76□□□□□ -0.37
DDX11-225ENST00000543511 PAPPA2Q9BXP8 1791 aa12.76□□□□□ -0.37
DDX11-225ENST00000543511 BAZ2AQ9UIF9 1905 aaKnown RBP12.76□□□□□ -0.37
DDX11-225ENST00000543511 ADM5C9JUS6 153 aa12.75□□□□□ -0.37
DDX11-225ENST00000543511 MYO1BO43795 1136 aa12.75□□□□□ -0.37
DDX11-225ENST00000543511 ITGBL1O95965 494 aaPredicted RBP12.75□□□□□ -0.37
DDX11-225ENST00000543511 CACNB3P54284 484 aa12.75□□□□□ -0.37
DDX11-225ENST00000543511 PPP4CP60510 307 aa12.75□□□□□ -0.37
DDX11-225ENST00000543511 CNTNAP1P78357 1384 aa12.75□□□□□ -0.37
DDX11-225ENST00000543511 APOBEC3FQ8IUX4 373 aaKnown RBP12.75□□□□□ -0.37
DDX11-225ENST00000543511 CNTROBQ8N137 903 aa12.75□□□□□ -0.37
DDX11-225ENST00000543511 DCPSQ96C86 337 aaKnown RBP12.75□□□□□ -0.37
DDX11-225ENST00000543511 PASKQ96RG2 1323 aa12.75□□□□□ -0.37
DDX11-225ENST00000543511 FSD1Q9BTV5 496 aa12.75□□□□□ -0.37
DDX11-225ENST00000543511 BEGAINQ9BUH8 593 aa12.75□□□□□ -0.37
DDX11-225ENST00000543511 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.75□□□□□ -0.37
DDX11-225ENST00000543511 RBM27Q9P2N5 1060 aaKnown RBP12.75□□□□□ -0.37
DDX11-225ENST00000543511 OTOFQ9HC10 1997 aa12.74□□□□□ -0.37
DDX11-225ENST00000543511 SSC5DA1L4H1 1573 aa12.74□□□□□ -0.37
DDX11-225ENST00000543511 RPAP1Q9BWH6 1393 aaPredicted RBP12.74□□□□□ -0.37
DDX11-225ENST00000543511 WDHD1O75717 1129 aaPredicted RBP12.74□□□□□ -0.37
DDX11-225ENST00000543511 DYNLL1P63167 89 aaKnown RBP12.74□□□□□ -0.37
DDX11-225ENST00000543511 FMR1Q06787 632 aaKnown RBP eCLIP12.74□□□□□ -0.37
DDX11-225ENST00000543511 FSTL1Q12841 308 aa12.74□□□□□ -0.37
DDX11-225ENST00000543511 NFIAQ12857 509 aa12.74□□□□□ -0.37
DDX11-225ENST00000543511 FKBP1CQ5VVH2 108 aa12.74□□□□□ -0.37
DDX11-225ENST00000543511 DLK2Q6UY11 383 aa12.74□□□□□ -0.37
DDX11-225ENST00000543511 CDC37L1Q7L3B6 337 aa12.74□□□□□ -0.37
DDX11-225ENST00000543511 KRT26Q7Z3Y9 468 aa12.74□□□□□ -0.37
DDX11-225ENST00000543511 MIGA1Q8NAN2 632 aa12.74□□□□□ -0.37
DDX11-225ENST00000543511 RIOK1Q9BRS2 568 aaKnown RBP12.74□□□□□ -0.37
DDX11-225ENST00000543511 VEZTQ9HBM0 779 aa12.74□□□□□ -0.37
DDX11-225ENST00000543511 USP40Q9NVE5 1235 aa12.74□□□□□ -0.37
DDX11-225ENST00000543511 AATFQ9NY61 560 aaKnown RBP eCLIP12.74□□□□□ -0.37
DDX11-225ENST00000543511 FAM198AQ9UFP1 575 aa12.74□□□□□ -0.37
DDX11-225ENST00000543511 TCP10L2B9ZVM9 353 aa12.73□□□□□ -0.37
DDX11-225ENST00000543511 TRAF5O00463 557 aa12.73□□□□□ -0.37
DDX11-225ENST00000543511 RNF113AO15541 343 aaKnown RBP12.73□□□□□ -0.37
DDX11-225ENST00000543511 ZFYP08048 801 aaPredicted RBP12.73□□□□□ -0.37
DDX11-225ENST00000543511 SDSP20132 328 aa12.73□□□□□ -0.37
DDX11-225ENST00000543511 SKIV2LQ15477 1246 aaKnown RBP12.73□□□□□ -0.37
DDX11-225ENST00000543511 ZMYM1Q5SVZ6 1142 aa12.73□□□□□ -0.37
DDX11-225ENST00000543511 ZSCAN25Q6NSZ9 544 aa12.73□□□□□ -0.37
DDX11-225ENST00000543511 USP48Q86UV5 1035 aa12.73□□□□□ -0.37
DDX11-225ENST00000543511 SULF1Q8IWU6 871 aa12.73□□□□□ -0.37
DDX11-225ENST00000543511 SH3RF3Q8TEJ3 882 aaPredicted RBP12.73□□□□□ -0.37
DDX11-225ENST00000543511 APPBP2Q92624 585 aa12.73□□□□□ -0.37
DDX11-225ENST00000543511 OSBP2Q969R2 916 aa12.73□□□□□ -0.37
DDX11-225ENST00000543511 IDI2Q9BXS1 227 aa12.73□□□□□ -0.37
DDX11-225ENST00000543511 DDX4Q9NQI0 724 aaKnown RBP12.73□□□□□ -0.37
DDX11-225ENST00000543511 LAMB1P07942 1786 aa12.73□□□□□ -0.37
DDX11-225ENST00000543511 COL2A1P02458 1487 aaPredicted RBP12.72□□□□□ -0.37
DDX11-225ENST00000543511 TRIM6-TRIM34B2RNG4 842 aa12.72□□□□□ -0.37
DDX11-225ENST00000543511 RGS3P49796 1198 aa12.72□□□□□ -0.37
DDX11-225ENST00000543511 TNFAIP1Q13829 316 aa12.72□□□□□ -0.37
DDX11-225ENST00000543511 GPR153Q6NV75 609 aa12.72□□□□□ -0.37
DDX11-225ENST00000543511 FAM83AQ86UY5 434 aa12.72□□□□□ -0.37
DDX11-225ENST00000543511 CDAN1Q8IWY9 1227 aa12.72□□□□□ -0.37
DDX11-225ENST00000543511 LCORLQ8N3X6 602 aa12.72□□□□□ -0.37
DDX11-225ENST00000543511 RILPL2Q969X0 211 aa12.72□□□□□ -0.37
DDX11-225ENST00000543511 CDCA5Q96FF9 252 aa12.72□□□□□ -0.37
DDX11-225ENST00000543511 TEPSINQ96N21 525 aa12.72□□□□□ -0.37
DDX11-225ENST00000543511 NOL10Q9BSC4 688 aaKnown RBP12.72□□□□□ -0.37
DDX11-225ENST00000543511 PUS7LQ9H0K6 701 aaKnown RBP12.72□□□□□ -0.37
DDX11-225ENST00000543511 TMOD2Q9NZR1 351 aa12.72□□□□□ -0.37
DDX11-225ENST00000543511 PPP2R3BQ9Y5P8 575 aa12.72□□□□□ -0.37
DDX11-225ENST00000543511 MAGEB6P1A0A0J9YX57 407 aa12.71□□□□□ -0.37
DDX11-225ENST00000543511 M0R2C6 588 aa12.71□□□□□ -0.37
DDX11-225ENST00000543511 ENTPD3O75355 529 aa12.71□□□□□ -0.37
DDX11-225ENST00000543511 MBD4O95243 580 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms